RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 ANGPTL3Q9Y5C1 460 aa6.27□□□□□ -1.41
USF3-202ENST00000478658 F8W8V4 182 aa6.27□□□□□ -1.41
USF3-202ENST00000478658 CASQ2O14958 399 aaPredicted RBP6.27□□□□□ -1.41
USF3-202ENST00000478658 RSPH4AQ5TD94 716 aa6.27□□□□□ -1.41
USF3-202ENST00000478658 NEK11Q8NG66 645 aa6.27□□□□□ -1.41
USF3-202ENST00000478658 KMT5BQ4FZB7 885 aa6.27□□□□□ -1.41
USF3-202ENST00000478658 MTUS1Q9ULD2 1270 aa6.27□□□□□ -1.41
USF3-202ENST00000478658 CCDC171Q6TFL3 1326 aa6.27□□□□□ -1.41
USF3-202ENST00000478658 GSTTP1A0A1W2PQM5 241 aa6.27□□□□□ -1.41
USF3-202ENST00000478658 PLEKHG5O94827 1062 aa6.27□□□□□ -1.41
USF3-202ENST00000478658 TRIM60Q495X7 471 aa6.27□□□□□ -1.41
USF3-202ENST00000478658 PHF23Q9BUL5 403 aaPredicted RBP6.27□□□□□ -1.41
USF3-202ENST00000478658 C9orf78Q9NZ63 289 aaPredicted RBP6.27□□□□□ -1.41
USF3-202ENST00000478658 HSPA8P11142 646 aaKnown RBP6.27□□□□□ -1.41
USF3-202ENST00000478658 VCX3BQ9H321 246 aa6.27□□□□□ -1.41
USF3-202ENST00000478658 MACROD2A1Z1Q3 448 aa6.27□□□□□ -1.41
USF3-202ENST00000478658 SLC4A8Q2Y0W8 1093 aa6.27□□□□□ -1.41
USF3-202ENST00000478658 KIF6Q6ZMV9 814 aa6.27□□□□□ -1.41
USF3-202ENST00000478658 CCDC69A6NI79 296 aa6.26□□□□□ -1.41
USF3-202ENST00000478658 CCDC38Q502W7 563 aa6.26□□□□□ -1.41
USF3-202ENST00000478658 SLKQ9H2G2 1235 aaPredicted RBP6.26□□□□□ -1.41
USF3-202ENST00000478658 RASAL2Q9UJF2 1139 aa6.26□□□□□ -1.41
USF3-202ENST00000478658 CACNA2D4Q7Z3S7 1137 aa6.26□□□□□ -1.41
USF3-202ENST00000478658 KIF15Q9NS87 1388 aa6.26□□□□□ -1.41
USF3-202ENST00000478658 G3BP1Q13283 466 aaKnown RBP eCLIP6.26□□□□□ -1.41
USF3-202ENST00000478658 CCT6BQ92526 530 aa6.26□□□□□ -1.41
USF3-202ENST00000478658 MIA2Q96PC5 1412 aa6.26□□□□□ -1.41
USF3-202ENST00000478658 AMPHP49418 695 aa6.26□□□□□ -1.41
USF3-202ENST00000478658 GOLGA8CPA6NN73 597 aa6.26□□□□□ -1.41
USF3-202ENST00000478658 PAWRQ96IZ0 340 aaKnown RBP6.26□□□□□ -1.41
USF3-202ENST00000478658 ANLNQ9NQW6 1124 aa6.26□□□□□ -1.41
USF3-202ENST00000478658 ZC4H2Q9NQZ6 224 aa6.26□□□□□ -1.41
USF3-202ENST00000478658 LIMCH1Q9UPQ0 1083 aa6.26□□□□□ -1.41
USF3-202ENST00000478658 GOLGA8QA0A0J9YX86 632 aa6.26□□□□□ -1.41
USF3-202ENST00000478658 GOLGA8OA6NCC3 632 aa6.26□□□□□ -1.41
USF3-202ENST00000478658 GOLGA8NF8WBI6 632 aa6.26□□□□□ -1.41
USF3-202ENST00000478658 PDXDC1Q6P996 788 aa6.26□□□□□ -1.41
USF3-202ENST00000478658 CCDC196A0A1B0GTZ2 297 aa6.26□□□□□ -1.41
USF3-202ENST00000478658 USP5P45974 858 aa6.26□□□□□ -1.41
USF3-202ENST00000478658 TAF11Q15544 211 aa6.26□□□□□ -1.41
USF3-202ENST00000478658 ATP2A3Q93084 1043 aa6.26□□□□□ -1.41
USF3-202ENST00000478658 GFAPP14136 432 aa6.25□□□□□ -1.41
USF3-202ENST00000478658 ZBTB16Q05516 673 aa6.25□□□□□ -1.41
USF3-202ENST00000478658 ATP6V1E2Q96A05 226 aa6.25□□□□□ -1.41
USF3-202ENST00000478658 COPG1Q9Y678 874 aaKnown RBP6.25□□□□□ -1.41
USF3-202ENST00000478658 CCNB3Q8WWL7 1395 aa6.25□□□□□ -1.41
USF3-202ENST00000478658 CTAGE6Q86UF2 777 aa6.25□□□□□ -1.41
USF3-202ENST00000478658 MRVI1Q9Y6F6 885 aa6.25□□□□□ -1.41
USF3-202ENST00000478658 LMAN1P49257 510 aa6.25□□□□□ -1.41
USF3-202ENST00000478658 IFFO1Q0D2I5 559 aa6.25□□□□□ -1.41
USF3-202ENST00000478658 SPA17Q15506 151 aa6.25□□□□□ -1.41
USF3-202ENST00000478658 CLUL1Q15846 466 aa6.25□□□□□ -1.41
USF3-202ENST00000478658 CCDC155Q8N6L0 562 aa6.25□□□□□ -1.41
USF3-202ENST00000478658 CPLX3Q8WVH0 158 aa6.25□□□□□ -1.41
USF3-202ENST00000478658 IFT81Q8WYA0 676 aa6.25□□□□□ -1.41
USF3-202ENST00000478658 TBC1D31Q96DN5 1066 aa6.25□□□□□ -1.41
USF3-202ENST00000478658 SCLT1Q96NL6 688 aa6.25□□□□□ -1.41
USF3-202ENST00000478658 TMOD4Q9NZQ9 345 aa6.25□□□□□ -1.41
USF3-202ENST00000478658 STIM2Q9P246 746 aa6.25□□□□□ -1.41
USF3-202ENST00000478658 ERICH4A6NGS2 130 aa6.25□□□□□ -1.41
USF3-202ENST00000478658 RANBP1P43487 201 aa6.25□□□□□ -1.41
USF3-202ENST00000478658 SMC3Q9UQE7 1217 aa6.25□□□□□ -1.41
USF3-202ENST00000478658 CARMIL2Q6F5E8 1435 aa6.25□□□□□ -1.41
USF3-202ENST00000478658 GIPC1O14908 333 aa6.25□□□□□ -1.41
USF3-202ENST00000478658 MAP3K21Q5TCX8 1036 aa6.25□□□□□ -1.41
USF3-202ENST00000478658 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.25□□□□□ -1.41
USF3-202ENST00000478658 ZMAT2Q96NC0 199 aaKnown RBP6.25□□□□□ -1.41
USF3-202ENST00000478658 MAD1L1Q9Y6D9 718 aa6.25□□□□□ -1.41
USF3-202ENST00000478658 LPXNO60711 386 aa6.25□□□□□ -1.41
USF3-202ENST00000478658 PSMA3P25788 255 aa6.25□□□□□ -1.41
USF3-202ENST00000478658 CCDC124Q96CT7 223 aaKnown RBP6.25□□□□□ -1.41
USF3-202ENST00000478658 CPSF2Q9P2I0 782 aaKnown RBP6.25□□□□□ -1.41
USF3-202ENST00000478658 UTP14CQ5TAP6 766 aaKnown RBP6.24□□□□□ -1.41
USF3-202ENST00000478658 A6NNZ2 444 aa6.24□□□□□ -1.41
USF3-202ENST00000478658 CHMP2AO43633 222 aa6.24□□□□□ -1.41
USF3-202ENST00000478658 HSF2BPO75031 334 aa6.24□□□□□ -1.41
USF3-202ENST00000478658 RAPGEF3O95398 923 aa6.24□□□□□ -1.41
USF3-202ENST00000478658 TUBB8Q3ZCM7 444 aa6.24□□□□□ -1.41
USF3-202ENST00000478658 ELMSAN1Q6PJG2 1045 aa6.24□□□□□ -1.41
USF3-202ENST00000478658 DDX49Q9Y6V7 483 aaKnown RBP6.24□□□□□ -1.41
USF3-202ENST00000478658 ATP5DP30049 168 aa6.24□□□□□ -1.41
USF3-202ENST00000478658 CKAP4Q07065 602 aaKnown RBP6.24□□□□□ -1.41
USF3-202ENST00000478658 PRR16Q569H4 304 aa6.24□□□□□ -1.41
USF3-202ENST00000478658 KLHL10Q6JEL2 608 aa6.24□□□□□ -1.41
USF3-202ENST00000478658 GAS2L2Q8NHY3 880 aa6.24□□□□□ -1.41
USF3-202ENST00000478658 GSDMBQ8TAX9 411 aa6.24□□□□□ -1.41
USF3-202ENST00000478658 JRKLQ9Y4A0 524 aa6.24□□□□□ -1.41
USF3-202ENST00000478658 TTC36A6NLP5 189 aa6.24□□□□□ -1.41
USF3-202ENST00000478658 TEFQ10587 303 aa6.24□□□□□ -1.41
USF3-202ENST00000478658 SDF4Q9BRK5 362 aa6.24□□□□□ -1.41
USF3-202ENST00000478658 SYNCQ9H7C4 482 aa6.24□□□□□ -1.41
USF3-202ENST00000478658 PFDN4Q9NQP4 134 aa6.24□□□□□ -1.41
USF3-202ENST00000478658 CWC25Q9NXE8 425 aaPredicted RBP6.24□□□□□ -1.41
USF3-202ENST00000478658 PALM3A6NDB9 673 aaPredicted RBP6.24□□□□□ -1.41
USF3-202ENST00000478658 NUF2Q9BZD4 464 aa6.24□□□□□ -1.41
USF3-202ENST00000478658 ANO2Q9NQ90 1003 aa6.24□□□□□ -1.41
USF3-202ENST00000478658 RNF216Q9NWF9 866 aaPredicted RBP6.24□□□□□ -1.41
USF3-202ENST00000478658 PFDN6O15212 129 aa6.24□□□□□ -1.41
USF3-202ENST00000478658 ZNF76P36508 570 aa6.24□□□□□ -1.41
USF3-202ENST00000478658 ATF7IPQ6VMQ6 1270 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms