RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 ZNF511Q8NB15 262 aa9.69□□□□□ -0.86
HOXB3-209ENST00000478644 FAM117AQ9C073 453 aa9.69□□□□□ -0.86
HOXB3-209ENST00000478644 ERBINQ96RT1 1412 aa9.68□□□□□ -0.86
HOXB3-209ENST00000478644 PLEKHG3A1L390 1219 aa9.68□□□□□ -0.86
HOXB3-209ENST00000478644 PER1O15534 1290 aaPredicted RBP9.68□□□□□ -0.86
HOXB3-209ENST00000478644 EHBP1Q8NDI1 1231 aa9.68□□□□□ -0.86
HOXB3-209ENST00000478644 POLR3EQ9NVU0 708 aa9.68□□□□□ -0.86
HOXB3-209ENST00000478644 DNMT1P26358 1616 aaKnown RBP9.67□□□□□ -0.86
HOXB3-209ENST00000478644 LTBP4Q8N2S1 1624 aa9.67□□□□□ -0.86
HOXB3-209ENST00000478644 RNF17Q9BXT8 1623 aaKnown RBP9.67□□□□□ -0.86
HOXB3-209ENST00000478644 ARHGAP31Q2M1Z3 1444 aa9.67□□□□□ -0.86
HOXB3-209ENST00000478644 AXIN1O15169 862 aa9.67□□□□□ -0.86
HOXB3-209ENST00000478644 KANK4Q5T7N3 995 aaPredicted RBP9.67□□□□□ -0.86
HOXB3-209ENST00000478644 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.67□□□□□ -0.86
HOXB3-209ENST00000478644 CPS1P31327 1500 aa9.66□□□□□ -0.86
HOXB3-209ENST00000478644 ANKRD30AQ9BXX3 1397 aa9.66□□□□□ -0.86
HOXB3-209ENST00000478644 TOM1O60784 492 aa9.66□□□□□ -0.86
HOXB3-209ENST00000478644 VARSP26640 1264 aaKnown RBP9.66□□□□□ -0.86
HOXB3-209ENST00000478644 CTHP32929 405 aa9.66□□□□□ -0.86
HOXB3-209ENST00000478644 PPP2R2DQ66LE6 453 aa9.66□□□□□ -0.86
HOXB3-209ENST00000478644 MAP10Q9P2G4 905 aa9.66□□□□□ -0.86
HOXB3-209ENST00000478644 UGGT1Q9NYU2 1555 aa9.66□□□□□ -0.86
HOXB3-209ENST00000478644 MED14O60244 1454 aa9.66□□□□□ -0.86
HOXB3-209ENST00000478644 DEPDC5O75140 1603 aa9.65□□□□□ -0.86
HOXB3-209ENST00000478644 POTECB2RU33 542 aa9.65□□□□□ -0.86
HOXB3-209ENST00000478644 FBXO31Q5XUX0 539 aaPredicted RBP9.65□□□□□ -0.86
HOXB3-209ENST00000478644 HELBQ8NG08 1087 aaPredicted RBP9.65□□□□□ -0.86
HOXB3-209ENST00000478644 DACH1Q9UI36 760 aa9.65□□□□□ -0.86
HOXB3-209ENST00000478644 KIF15Q9NS87 1388 aa9.64□□□□□ -0.87
HOXB3-209ENST00000478644 SPATA31D1Q6ZQQ2 1576 aa9.64□□□□□ -0.87
HOXB3-209ENST00000478644 HPS1Q92902 700 aa9.64□□□□□ -0.87
HOXB3-209ENST00000478644 EID1Q9Y6B2 187 aa9.64□□□□□ -0.87
HOXB3-209ENST00000478644 FGD6Q6ZV73 1430 aa9.64□□□□□ -0.87
HOXB3-209ENST00000478644 PTPN23Q9H3S7 1636 aa9.64□□□□□ -0.87
HOXB3-209ENST00000478644 ABCC3O15438 1527 aa9.63□□□□□ -0.87
HOXB3-209ENST00000478644 UBAP1LF5GYI3 381 aa9.63□□□□□ -0.87
HOXB3-209ENST00000478644 ALDH1A1P00352 501 aa9.63□□□□□ -0.87
HOXB3-209ENST00000478644 LINC01559Q495D7 138 aa9.63□□□□□ -0.87
HOXB3-209ENST00000478644 HOMEZQ8IX15 550 aa9.63□□□□□ -0.87
HOXB3-209ENST00000478644 GOPCQ9HD26 462 aa9.63□□□□□ -0.87
HOXB3-209ENST00000478644 ABCC5O15440 1437 aa9.63□□□□□ -0.87
HOXB3-209ENST00000478644 DAPK1P53355 1430 aa9.63□□□□□ -0.87
HOXB3-209ENST00000478644 POLR1AO95602 1720 aaPredicted RBP9.62□□□□□ -0.87
HOXB3-209ENST00000478644 ZNF335Q9H4Z2 1342 aaPredicted RBP9.62□□□□□ -0.87
HOXB3-209ENST00000478644 PROCA1Q8NCQ7 364 aaPredicted RBP9.62□□□□□ -0.87
HOXB3-209ENST00000478644 ARMC2Q8NEN0 867 aa9.62□□□□□ -0.87
HOXB3-209ENST00000478644 SLC52A1Q9NWF4 448 aa9.62□□□□□ -0.87
HOXB3-209ENST00000478644 GTF3C3Q9Y5Q9 886 aa9.62□□□□□ -0.87
HOXB3-209ENST00000478644 NPHP4O75161 1426 aaPredicted RBP9.62□□□□□ -0.87
HOXB3-209ENST00000478644 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.62□□□□□ -0.87
HOXB3-209ENST00000478644 ERVK-7P63135 1459 aa9.61□□□□□ -0.87
HOXB3-209ENST00000478644 RRP7BPQ9NSQ0 103 aa9.61□□□□□ -0.87
HOXB3-209ENST00000478644 PRDM15P57071 1507 aaPredicted RBP9.61□□□□□ -0.87
HOXB3-209ENST00000478644 TSC1Q92574 1164 aa9.6□□□□□ -0.87
HOXB3-209ENST00000478644 CDK15Q96Q40 435 aa9.6□□□□□ -0.87
HOXB3-209ENST00000478644 LMTK2Q8IWU2 1503 aa9.6□□□□□ -0.87
HOXB3-209ENST00000478644 CROCC2H7BZ55 1655 aa9.59□□□□□ -0.87
HOXB3-209ENST00000478644 KDM5AP29375 1690 aaKnown RBP9.59□□□□□ -0.87
HOXB3-209ENST00000478644 CTDSPL2Q05D32 466 aa9.59□□□□□ -0.87
HOXB3-209ENST00000478644 ADGRL2O95490 1459 aa9.59□□□□□ -0.87
HOXB3-209ENST00000478644 RPRD2Q5VT52 1461 aaKnown RBP9.59□□□□□ -0.87
HOXB3-209ENST00000478644 SLIT1O75093 1534 aa9.58□□□□□ -0.88
HOXB3-209ENST00000478644 SH3RF1Q7Z6J0 888 aa9.58□□□□□ -0.88
HOXB3-209ENST00000478644 TXNDC2Q86VQ3 553 aa9.58□□□□□ -0.88
HOXB3-209ENST00000478644 BPHLQ86WA6 291 aaPredicted RBP9.58□□□□□ -0.88
HOXB3-209ENST00000478644 FAM174AQ8TBP5 190 aa9.58□□□□□ -0.88
HOXB3-209ENST00000478644 GPKOWQ92917 476 aaPredicted RBP eCLIP9.58□□□□□ -0.88
HOXB3-209ENST00000478644 FOXJ1Q92949 421 aa9.58□□□□□ -0.88
HOXB3-209ENST00000478644 ZNF775Q96BV0 537 aaPredicted RBP9.58□□□□□ -0.88
HOXB3-209ENST00000478644 DISP3Q9P2K9 1392 aa9.58□□□□□ -0.88
HOXB3-209ENST00000478644 C4orf48Q5BLP8 95 aa9.57□□□□□ -0.88
HOXB3-209ENST00000478644 ATP13A2Q9NQ11 1180 aa9.57□□□□□ -0.88
HOXB3-209ENST00000478644 GMPR2Q9P2T1 348 aaKnown RBP9.57□□□□□ -0.88
HOXB3-209ENST00000478644 WASF2Q9Y6W5 498 aa9.57□□□□□ -0.88
HOXB3-209ENST00000478644 NEURL4Q96JN8 1562 aa9.57□□□□□ -0.88
HOXB3-209ENST00000478644 MROH1Q8NDA8 1641 aa9.56□□□□□ -0.88
HOXB3-209ENST00000478644 IQGAP1P46940 1657 aa9.56□□□□□ -0.88
HOXB3-209ENST00000478644 SCAF11Q99590 1463 aaKnown RBP9.56□□□□□ -0.88
HOXB3-209ENST00000478644 ARHGAP23Q9P227 1491 aa9.56□□□□□ -0.88
HOXB3-209ENST00000478644 TLL2Q9Y6L7 1015 aa9.56□□□□□ -0.88
HOXB3-209ENST00000478644 ROCK1Q13464 1354 aa9.55□□□□□ -0.88
HOXB3-209ENST00000478644 TMEM2Q9UHN6 1383 aa9.55□□□□□ -0.88
HOXB3-209ENST00000478644 FAM50AQ14320 339 aaKnown RBP9.55□□□□□ -0.88
HOXB3-209ENST00000478644 NBPF14Q5TI25 921 aa9.55□□□□□ -0.88
HOXB3-209ENST00000478644 SH3BP5LQ7L8J4 393 aa9.55□□□□□ -0.88
HOXB3-209ENST00000478644 C1QTNF2Q9BXJ5 285 aa9.55□□□□□ -0.88
HOXB3-209ENST00000478644 ANKRD50Q9ULJ7 1429 aa9.55□□□□□ -0.88
HOXB3-209ENST00000478644 VWDEQ8N2E2 1590 aa9.54□□□□□ -0.88
HOXB3-209ENST00000478644 UBR1Q8IWV7 1749 aa9.54□□□□□ -0.88
HOXB3-209ENST00000478644 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.54□□□□□ -0.88
HOXB3-209ENST00000478644 CHIC2Q9UKJ5 165 aa9.54□□□□□ -0.88
HOXB3-209ENST00000478644 SYNMO15061 1565 aa9.54□□□□□ -0.88
HOXB3-209ENST00000478644 CEP152O94986 1710 aa9.53□□□□□ -0.88
HOXB3-209ENST00000478644 ADH1CP00326 375 aa9.53□□□□□ -0.88
HOXB3-209ENST00000478644 BRPF1P55201 1214 aaPredicted RBP9.53□□□□□ -0.88
HOXB3-209ENST00000478644 IDI1Q13907 227 aa9.53□□□□□ -0.88
HOXB3-209ENST00000478644 NEUROD2Q15784 382 aa9.53□□□□□ -0.88
HOXB3-209ENST00000478644 TRMT44Q8IYL2 757 aaKnown RBP9.53□□□□□ -0.88
HOXB3-209ENST00000478644 LRRN4Q8WUT4 740 aa9.53□□□□□ -0.88
HOXB3-209ENST00000478644 KLF16Q9BXK1 252 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms