RNA–Protein interactions for RNA: ENST00000478230.5

SNX21-210, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 907 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-210ENST00000478230 RNMTO43148 476 aaKnown RBP20.12■□□□□ 0.81
SNX21-210ENST00000478230 MSH5O43196 834 aa20.12■□□□□ 0.81
SNX21-210ENST00000478230 POLD1P28340 1107 aa20.12■□□□□ 0.81
SNX21-210ENST00000478230 RBM42Q9BTD8 480 aaKnown RBP20.12■□□□□ 0.81
SNX21-210ENST00000478230 PDGFDQ9GZP0 370 aaPredicted RBP20.12■□□□□ 0.81
SNX21-210ENST00000478230 KDM6AO15550 1401 aaPredicted RBP20.11■□□□□ 0.81
SNX21-210ENST00000478230 PNPLA7Q6ZV29 1317 aa20.11■□□□□ 0.81
SNX21-210ENST00000478230 GNAT3A8MTJ3 354 aa20.11■□□□□ 0.81
SNX21-210ENST00000478230 SLC52A2Q9HAB3 445 aa20.11■□□□□ 0.81
SNX21-210ENST00000478230 CASZ1Q86V15 1759 aa20.11■□□□□ 0.81
SNX21-210ENST00000478230 PRKAR2BP31323 418 aa20.1■□□□□ 0.81
SNX21-210ENST00000478230 TEFQ10587 303 aa20.08■□□□□ 0.81
SNX21-210ENST00000478230 RSPH6AQ9H0K4 717 aa20.08■□□□□ 0.81
SNX21-210ENST00000478230 MAP3K5Q99683 1374 aa20.08■□□□□ 0.8
SNX21-210ENST00000478230 QSER1Q2KHR3 1735 aa20.07■□□□□ 0.8
SNX21-210ENST00000478230 SSFA2P28290 1259 aa20.07■□□□□ 0.8
SNX21-210ENST00000478230 PTGER2P43116 358 aa20.07■□□□□ 0.8
SNX21-210ENST00000478230 RC3H1Q5TC82 1133 aaKnown RBP20.07■□□□□ 0.8
SNX21-210ENST00000478230 RTF1Q92541 710 aaKnown RBP20.07■□□□□ 0.8
SNX21-210ENST00000478230 LGR6Q9HBX8 967 aa20.07■□□□□ 0.8
SNX21-210ENST00000478230 COL23A1Q86Y22 540 aaPredicted RBP20.06■□□□□ 0.8
SNX21-210ENST00000478230 ARXQ96QS3 562 aa20.06■□□□□ 0.8
SNX21-210ENST00000478230 C5P01031 1676 aa20.06■□□□□ 0.8
SNX21-210ENST00000478230 PTCD1O75127 700 aaKnown RBP20.05■□□□□ 0.8
SNX21-210ENST00000478230 LINC00116Q8NCU8 138 aa20.05■□□□□ 0.8
SNX21-210ENST00000478230 MYBBP1AQ9BQG0 1328 aaKnown RBP20.04■□□□□ 0.8
SNX21-210ENST00000478230 GNPATO15228 680 aa20.04■□□□□ 0.8
SNX21-210ENST00000478230 HTATSF1O43719 755 aaKnown RBP20.04■□□□□ 0.8
SNX21-210ENST00000478230 ITPK1Q13572 414 aa20.04■□□□□ 0.8
SNX21-210ENST00000478230 SGIP1Q9BQI5 828 aa20.04■□□□□ 0.8
SNX21-210ENST00000478230 RTCBQ9Y3I0 505 aaKnown RBP20.04■□□□□ 0.8
SNX21-210ENST00000478230 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.03■□□□□ 0.8
SNX21-210ENST00000478230 ADRA2BP18089 450 aa20.03■□□□□ 0.8
SNX21-210ENST00000478230 TTC5Q8N0Z6 440 aa20.03■□□□□ 0.8
SNX21-210ENST00000478230 SCN11AQ9UI33 1791 aa20.03■□□□□ 0.8
SNX21-210ENST00000478230 CNTNAP4Q9C0A0 1308 aa20.02■□□□□ 0.8
SNX21-210ENST00000478230 C4BP0C0L5 1744 aa20.02■□□□□ 0.8
SNX21-210ENST00000478230 TAF1LQ8IZX4 1826 aa20.02■□□□□ 0.8
SNX21-210ENST00000478230 PHACTR3Q96KR7 559 aa20.02■□□□□ 0.8
SNX21-210ENST00000478230 ZNF831Q5JPB2 1677 aa20.01■□□□□ 0.79
SNX21-210ENST00000478230 PHF14O94880 888 aa20.01■□□□□ 0.79
SNX21-210ENST00000478230 TRAPPC3LQ5T215 181 aa20.01■□□□□ 0.79
SNX21-210ENST00000478230 VSIG10Q8N0Z9 540 aa20.01■□□□□ 0.79
SNX21-210ENST00000478230 MRC1P22897 1456 aa20■□□□□ 0.79
SNX21-210ENST00000478230 RPS6KA4O75676 772 aa20■□□□□ 0.79
SNX21-210ENST00000478230 IL17REQ8NFR9 667 aa20■□□□□ 0.79
SNX21-210ENST00000478230 SLC4A9Q96Q91 983 aa19.99■□□□□ 0.79
SNX21-210ENST00000478230 TEX13AQ9BXU3 409 aaPredicted RBP19.99■□□□□ 0.79
SNX21-210ENST00000478230 MAPK8IP3Q9UPT6 1336 aa19.99■□□□□ 0.79
SNX21-210ENST00000478230 SYT17Q9BSW7 474 aa19.98■□□□□ 0.79
SNX21-210ENST00000478230 FHDC1Q9C0D6 1143 aaPredicted RBP19.98■□□□□ 0.79
SNX21-210ENST00000478230 ZNF316A6NFI3 1004 aaPredicted RBP19.97■□□□□ 0.79
SNX21-210ENST00000478230 RFC4P35249 363 aa19.97■□□□□ 0.79
SNX21-210ENST00000478230 CRKLP46109 303 aaKnown RBP19.97■□□□□ 0.79
SNX21-210ENST00000478230 SLC39A6Q13433 755 aa19.97■□□□□ 0.79
SNX21-210ENST00000478230 CEMIPQ8WUJ3 1361 aa19.96■□□□□ 0.79
SNX21-210ENST00000478230 STARD3NLO95772 234 aa19.96■□□□□ 0.79
SNX21-210ENST00000478230 ZNF790Q6PG37 636 aa19.96■□□□□ 0.79
SNX21-210ENST00000478230 NLGN1Q8N2Q7 840 aa19.96■□□□□ 0.79
SNX21-210ENST00000478230 ADAMTS7Q9UKP4 1686 aa19.96■□□□□ 0.79
SNX21-210ENST00000478230 BTBD11A6QL63 1104 aa19.95■□□□□ 0.78
SNX21-210ENST00000478230 WDR43Q15061 677 aaKnown RBP eCLIP19.95■□□□□ 0.78
SNX21-210ENST00000478230 PRKRIP1Q9H875 184 aaPredicted RBP19.95■□□□□ 0.78
SNX21-210ENST00000478230 TUBGCP6Q96RT7 1819 aa19.95■□□□□ 0.78
SNX21-210ENST00000478230 MSL1Q68DK7 614 aa19.94■□□□□ 0.78
SNX21-210ENST00000478230 FMNL2Q96PY5 1086 aa19.94■□□□□ 0.78
SNX21-210ENST00000478230 CCDC87Q9NVE4 849 aa19.94■□□□□ 0.78
SNX21-210ENST00000478230 NFE2L2Q16236 605 aa19.93■□□□□ 0.78
SNX21-210ENST00000478230 DNAJC10Q8IXB1 793 aa19.93■□□□□ 0.78
SNX21-210ENST00000478230 KLHL34Q8N239 644 aa19.93■□□□□ 0.78
SNX21-210ENST00000478230 PNISRQ8TF01 805 aaKnown RBP19.93■□□□□ 0.78
SNX21-210ENST00000478230 ARHGEF1Q92888 912 aaKnown RBP19.93■□□□□ 0.78
SNX21-210ENST00000478230 PLEKHF1Q96S99 279 aa19.93■□□□□ 0.78
SNX21-210ENST00000478230 UBR3Q6ZT12 1888 aa19.92■□□□□ 0.78
SNX21-210ENST00000478230 CYP19A1P11511 503 aaPredicted RBP19.91■□□□□ 0.78
SNX21-210ENST00000478230 TAF7Q15545 349 aaPredicted RBP19.91■□□□□ 0.78
SNX21-210ENST00000478230 NPM2Q86SE8 214 aaKnown RBP19.91■□□□□ 0.78
SNX21-210ENST00000478230 SRCAPQ6ZRS2 3230 aa19.91■□□□□ 0.78
SNX21-210ENST00000478230 COL24A1Q17RW2 1714 aa19.9■□□□□ 0.78
SNX21-210ENST00000478230 LMOD3Q0VAK6 560 aa19.9■□□□□ 0.78
SNX21-210ENST00000478230 MCM10Q7L590 875 aa19.9■□□□□ 0.78
SNX21-210ENST00000478230 AMIGO3Q86WK7 504 aa19.9■□□□□ 0.78
SNX21-210ENST00000478230 CD2APQ9Y5K6 639 aa19.9■□□□□ 0.78
SNX21-210ENST00000478230 ZPR1O75312 459 aa19.89■□□□□ 0.77
SNX21-210ENST00000478230 INTS5Q6P9B9 1019 aaKnown RBP19.89■□□□□ 0.77
SNX21-210ENST00000478230 ZNF496Q96IT1 587 aaPredicted RBP19.89■□□□□ 0.77
SNX21-210ENST00000478230 CICQ96RK0 1608 aaPredicted RBP19.89■□□□□ 0.77
SNX21-210ENST00000478230 HEG1Q9ULI3 1381 aa19.89■□□□□ 0.77
SNX21-210ENST00000478230 VIRMAQ69YN4 1812 aaKnown RBP19.88■□□□□ 0.77
SNX21-210ENST00000478230 A0A087WZG4 1122 aa19.88■□□□□ 0.77
SNX21-210ENST00000478230 SMIM5Q71RC9 77 aa19.88■□□□□ 0.77
SNX21-210ENST00000478230 COL5A3P25940 1745 aaPredicted RBP19.88■□□□□ 0.77
SNX21-210ENST00000478230 KCPQ6ZWJ8 1503 aa19.86■□□□□ 0.77
SNX21-210ENST00000478230 SNRPA1P09661 255 aaKnown RBP19.86■□□□□ 0.77
SNX21-210ENST00000478230 PARP3Q9Y6F1 533 aa19.86■□□□□ 0.77
SNX21-210ENST00000478230 GYS1P13807 737 aa19.85■□□□□ 0.77
SNX21-210ENST00000478230 RIPK4P57078 832 aa19.85■□□□□ 0.77
SNX21-210ENST00000478230 DCTN1Q14203 1278 aa19.85■□□□□ 0.77
SNX21-210ENST00000478230 GPR162Q16538 588 aa19.85■□□□□ 0.77
SNX21-210ENST00000478230 RUNDC1Q96C34 613 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms