RNA–Protein interactions for RNA: ENST00000478027.2

RPSA-207, Transcript of ribosomal protein SA, humanhuman

TSL 2

Gene RPSA, Length 1,227 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-207ENST00000478027 PRKAR2BP31323 418 aa15.4■□□□□ 0.06
RPSA-207ENST00000478027 PRKRIP1Q9H875 184 aaPredicted RBP15.4■□□□□ 0.06
RPSA-207ENST00000478027 SIPA1L3O60292 1781 aaPredicted RBP15.39■□□□□ 0.05
RPSA-207ENST00000478027 DLG5Q8TDM6 1919 aa15.39■□□□□ 0.05
RPSA-207ENST00000478027 GAS2L2Q8NHY3 880 aa15.39■□□□□ 0.05
RPSA-207ENST00000478027 STK32BQ9NY57 414 aa15.39■□□□□ 0.05
RPSA-207ENST00000478027 HMGB2P26583 209 aaKnown RBP15.38■□□□□ 0.05
RPSA-207ENST00000478027 SLC15A2Q16348 729 aa15.38■□□□□ 0.05
RPSA-207ENST00000478027 CCNL1Q9UK58 526 aaPredicted RBP15.38■□□□□ 0.05
RPSA-207ENST00000478027 MAP3K5Q99683 1374 aa15.37■□□□□ 0.05
RPSA-207ENST00000478027 RNMTO43148 476 aaKnown RBP15.37■□□□□ 0.05
RPSA-207ENST00000478027 CABP4P57796 275 aa15.37■□□□□ 0.05
RPSA-207ENST00000478027 PHACTR3Q96KR7 559 aa15.37■□□□□ 0.05
RPSA-207ENST00000478027 ASAP1Q9ULH1 1129 aa15.37■□□□□ 0.05
RPSA-207ENST00000478027 C4BP0C0L5 1744 aa15.37■□□□□ 0.05
RPSA-207ENST00000478027 CICQ96RK0 1608 aaPredicted RBP15.36■□□□□ 0.05
RPSA-207ENST00000478027 KCNQ4P56696 695 aa15.36■□□□□ 0.05
RPSA-207ENST00000478027 AKT1S1Q96B36 256 aa15.36■□□□□ 0.05
RPSA-207ENST00000478027 ATG3Q9NT62 314 aa15.36■□□□□ 0.05
RPSA-207ENST00000478027 COL5A3P25940 1745 aaPredicted RBP15.36■□□□□ 0.05
RPSA-207ENST00000478027 UBR2Q8IWV8 1755 aa15.35■□□□□ 0.05
RPSA-207ENST00000478027 GNAT3A8MTJ3 354 aa15.35■□□□□ 0.05
RPSA-207ENST00000478027 NFATC2IPQ8NCF5 419 aa15.35■□□□□ 0.05
RPSA-207ENST00000478027 SLC52A2Q9HAB3 445 aa15.35■□□□□ 0.05
RPSA-207ENST00000478027 LGR6Q9HBX8 967 aa15.35■□□□□ 0.05
RPSA-207ENST00000478027 UBR3Q6ZT12 1888 aa15.35■□□□□ 0.05
RPSA-207ENST00000478027 LOC102724428A0A0B4J2F2 783 aa15.34■□□□□ 0.05
RPSA-207ENST00000478027 SIK1P57059 783 aa15.34■□□□□ 0.05
RPSA-207ENST00000478027 ZNF827Q17R98 1081 aa15.34■□□□□ 0.05
RPSA-207ENST00000478027 PLEKHF1Q96S99 279 aa15.33■□□□□ 0.04
RPSA-207ENST00000478027 PNNQ9H307 717 aaKnown RBP15.33■□□□□ 0.04
RPSA-207ENST00000478027 CEMIPQ8WUJ3 1361 aa15.33■□□□□ 0.04
RPSA-207ENST00000478027 TJP1Q07157 1748 aa15.32■□□□□ 0.04
RPSA-207ENST00000478027 NEFMP07197 916 aa15.32■□□□□ 0.04
RPSA-207ENST00000478027 COL24A1Q17RW2 1714 aa15.31■□□□□ 0.04
RPSA-207ENST00000478027 IL17REQ8NFR9 667 aa15.31■□□□□ 0.04
RPSA-207ENST00000478027 ATP6V1AP38606 617 aa15.3■□□□□ 0.04
RPSA-207ENST00000478027 MYH14Q7Z406 1995 aaKnown RBP15.3■□□□□ 0.04
RPSA-207ENST00000478027 PDGFDQ9GZP0 370 aaPredicted RBP15.3■□□□□ 0.04
RPSA-207ENST00000478027 TFCP2L1Q9NZI6 479 aa15.3■□□□□ 0.04
RPSA-207ENST00000478027 KCPQ6ZWJ8 1503 aa15.29■□□□□ 0.04
RPSA-207ENST00000478027 PNPLA7Q6ZV29 1317 aa15.29■□□□□ 0.04
RPSA-207ENST00000478027 HTATSF1O43719 755 aaKnown RBP15.29■□□□□ 0.04
RPSA-207ENST00000478027 TEFQ10587 303 aa15.29■□□□□ 0.04
RPSA-207ENST00000478027 SLC4A9Q96Q91 983 aa15.29■□□□□ 0.04
RPSA-207ENST00000478027 MAPK8IP3Q9UPT6 1336 aa15.28■□□□□ 0.04
RPSA-207ENST00000478027 ITPK1Q13572 414 aa15.28■□□□□ 0.04
RPSA-207ENST00000478027 WDR43Q15061 677 aaKnown RBP eCLIP15.28■□□□□ 0.04not detected■□□□□ 11.1
RPSA-207ENST00000478027 LINC00116Q8NCU8 138 aa15.28■□□□□ 0.04
RPSA-207ENST00000478027 RTF1Q92541 710 aaKnown RBP15.28■□□□□ 0.04
RPSA-207ENST00000478027 RBM42Q9BTD8 480 aaKnown RBP15.28■□□□□ 0.04
RPSA-207ENST00000478027 SPON1Q9HCB6 807 aa15.28■□□□□ 0.04
RPSA-207ENST00000478027 ANP32CO43423 234 aa15.27■□□□□ 0.04
RPSA-207ENST00000478027 NFE2L2Q16236 605 aa15.27■□□□□ 0.04
RPSA-207ENST00000478027 PTCD1O75127 700 aaKnown RBP15.26■□□□□ 0.03
RPSA-207ENST00000478027 SLC16A10Q8TF71 515 aa15.26■□□□□ 0.03
RPSA-207ENST00000478027 AK7Q96M32 723 aa15.26■□□□□ 0.03
RPSA-207ENST00000478027 SLC39A6Q13433 755 aa15.25■□□□□ 0.03
RPSA-207ENST00000478027 MCM10Q7L590 875 aa15.25■□□□□ 0.03
RPSA-207ENST00000478027 FLAD1Q8NFF5 587 aa15.25■□□□□ 0.03
RPSA-207ENST00000478027 MTFR1LQ9H019 292 aa15.25■□□□□ 0.03
RPSA-207ENST00000478027 KDM3BQ7LBC6 1761 aa15.24■□□□□ 0.03
RPSA-207ENST00000478027 CNTNAP4Q9C0A0 1308 aa15.24■□□□□ 0.03
RPSA-207ENST00000478027 ZBTB7AO95365 584 aa15.24■□□□□ 0.03
RPSA-207ENST00000478027 RC3H1Q5TC82 1133 aaKnown RBP15.24■□□□□ 0.03
RPSA-207ENST00000478027 ADAMTS8Q9UP79 889 aa15.24■□□□□ 0.03
RPSA-207ENST00000478027 C4AP0C0L4 1744 aa15.23■□□□□ 0.03
RPSA-207ENST00000478027 SSFA2P28290 1259 aa15.23■□□□□ 0.03
RPSA-207ENST00000478027 DCTN1Q14203 1278 aa15.23■□□□□ 0.03
RPSA-207ENST00000478027 ZNF790Q6PG37 636 aa15.23■□□□□ 0.03
RPSA-207ENST00000478027 COL23A1Q86Y22 540 aaPredicted RBP15.23■□□□□ 0.03
RPSA-207ENST00000478027 TTC5Q8N0Z6 440 aa15.23■□□□□ 0.03
RPSA-207ENST00000478027 VSIG10Q8N0Z9 540 aa15.23■□□□□ 0.03
RPSA-207ENST00000478027 RUNDC1Q96C34 613 aa15.23■□□□□ 0.03
RPSA-207ENST00000478027 GNPATO15228 680 aa15.22■□□□□ 0.03
RPSA-207ENST00000478027 AMIGO3Q86WK7 504 aa15.22■□□□□ 0.03
RPSA-207ENST00000478027 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.21■□□□□ 0.03
RPSA-207ENST00000478027 BTBD11A6QL63 1104 aa15.21■□□□□ 0.03
RPSA-207ENST00000478027 TMPOP42166 694 aaKnown RBP15.21■□□□□ 0.03
RPSA-207ENST00000478027 PTGER2P43116 358 aa15.21■□□□□ 0.03
RPSA-207ENST00000478027 CCDC184Q52MB2 194 aa15.21■□□□□ 0.03
RPSA-207ENST00000478027 CCDC146Q8IYE0 955 aa15.21■□□□□ 0.03
RPSA-207ENST00000478027 SGIP1Q9BQI5 828 aa15.21■□□□□ 0.03
RPSA-207ENST00000478027 ATF5Q9Y2D1 282 aaPredicted RBP15.21■□□□□ 0.03
RPSA-207ENST00000478027 HEG1Q9ULI3 1381 aa15.21■□□□□ 0.02
RPSA-207ENST00000478027 CRKLP46109 303 aaKnown RBP15.2■□□□□ 0.02
RPSA-207ENST00000478027 RIPK4P57078 832 aa15.2■□□□□ 0.02
RPSA-207ENST00000478027 TAF7Q15545 349 aaPredicted RBP15.2■□□□□ 0.02
RPSA-207ENST00000478027 ZNF496Q96IT1 587 aaPredicted RBP15.2■□□□□ 0.02
RPSA-207ENST00000478027 RTCBQ9Y3I0 505 aaKnown RBP15.2■□□□□ 0.02
RPSA-207ENST00000478027 LAMB4A4D0S4 1761 aa15.19■□□□□ 0.02
RPSA-207ENST00000478027 RPS6KA4O75676 772 aa15.19■□□□□ 0.02
RPSA-207ENST00000478027 PHF14O94880 888 aa15.19■□□□□ 0.02
RPSA-207ENST00000478027 LMOD3Q0VAK6 560 aa15.19■□□□□ 0.02
RPSA-207ENST00000478027 DNAJC10Q8IXB1 793 aa15.19■□□□□ 0.02
RPSA-207ENST00000478027 FMNL2Q96PY5 1086 aa15.19■□□□□ 0.02
RPSA-207ENST00000478027 CYP19A1P11511 503 aaPredicted RBP15.18■□□□□ 0.02
RPSA-207ENST00000478027 PNISRQ8TF01 805 aaKnown RBP15.18■□□□□ 0.02
RPSA-207ENST00000478027 PPP1R1BQ9UD71 204 aaPredicted RBP15.18■□□□□ 0.02
RPSA-207ENST00000478027 KCNQ3O43525 872 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms