RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 PLCG2P16885 1265 aa11.37□□□□□ -0.59
ERCC8-205ENST00000477893 IFNL1Q8IU54 200 aa11.37□□□□□ -0.59
ERCC8-205ENST00000477893 RAPGEF4Q8WZA2 1011 aa11.37□□□□□ -0.59
ERCC8-205ENST00000477893 TMEM106CQ9BVX2 250 aa11.37□□□□□ -0.59
ERCC8-205ENST00000477893 NBPF14Q5TI25 921 aa11.36□□□□□ -0.59
ERCC8-205ENST00000477893 ZCRB1Q8TBF4 217 aaKnown RBP11.36□□□□□ -0.59
ERCC8-205ENST00000477893 BCL9O00512 1426 aa11.35□□□□□ -0.59
ERCC8-205ENST00000477893 ANKRD26Q9UPS8 1709 aa11.35□□□□□ -0.59
ERCC8-205ENST00000477893 TATP17735 454 aaPredicted RBP11.35□□□□□ -0.59
ERCC8-205ENST00000477893 MORC1Q86VD1 984 aa11.35□□□□□ -0.59
ERCC8-205ENST00000477893 ANO8Q9HCE9 1232 aaPredicted RBP11.35□□□□□ -0.59
ERCC8-205ENST00000477893 POLKQ9UBT6 870 aa11.35□□□□□ -0.59
ERCC8-205ENST00000477893 KNSTRNQ9Y448 316 aa11.35□□□□□ -0.59
ERCC8-205ENST00000477893 KIF24Q5T7B8 1368 aa11.34□□□□□ -0.59
ERCC8-205ENST00000477893 TXNRD1Q16881 649 aa11.34□□□□□ -0.59
ERCC8-205ENST00000477893 DOT1LQ8TEK3 1739 aa11.34□□□□□ -0.59
ERCC8-205ENST00000477893 SHANK3Q9BYB0 1731 aa11.34□□□□□ -0.59
ERCC8-205ENST00000477893 PLSCR1O15162 318 aa11.33□□□□□ -0.6
ERCC8-205ENST00000477893 RGPD3A6NKT7 1758 aaPredicted RBP11.33□□□□□ -0.6
ERCC8-205ENST00000477893 RGPD4Q7Z3J3 1758 aa11.33□□□□□ -0.6
ERCC8-205ENST00000477893 WASHC2AQ641Q2 1341 aa11.33□□□□□ -0.6
ERCC8-205ENST00000477893 BTAF1O14981 1849 aa11.32□□□□□ -0.6
ERCC8-205ENST00000477893 NSD2O96028 1365 aa11.32□□□□□ -0.6
ERCC8-205ENST00000477893 PRIM1P49642 420 aaKnown RBP11.32□□□□□ -0.6
ERCC8-205ENST00000477893 CC2D1BQ5T0F9 858 aaKnown RBP11.32□□□□□ -0.6
ERCC8-205ENST00000477893 PLCD3Q8N3E9 789 aa11.32□□□□□ -0.6
ERCC8-205ENST00000477893 MAP2P11137 1827 aaKnown RBP11.32□□□□□ -0.6
ERCC8-205ENST00000477893 LRP5O75197 1615 aa11.31□□□□□ -0.6
ERCC8-205ENST00000477893 EIF4A2Q14240 407 aaKnown RBP11.31□□□□□ -0.6
ERCC8-205ENST00000477893 MARVELD3Q96A59 401 aa11.31□□□□□ -0.6
ERCC8-205ENST00000477893 EYA1Q99502 592 aa11.31□□□□□ -0.6
ERCC8-205ENST00000477893 STK32BQ9NY57 414 aa11.31□□□□□ -0.6
ERCC8-205ENST00000477893 PCDH11XQ9BZA7 1347 aa11.31□□□□□ -0.6
ERCC8-205ENST00000477893 PCDH11YQ9BZA8 1340 aa11.31□□□□□ -0.6
ERCC8-205ENST00000477893 KAT6BQ8WYB5 2073 aa11.31□□□□□ -0.6
ERCC8-205ENST00000477893 KCNQ4P56696 695 aa11.3□□□□□ -0.6
ERCC8-205ENST00000477893 PDGFDQ9GZP0 370 aaPredicted RBP11.3□□□□□ -0.6
ERCC8-205ENST00000477893 ZBTB7AO95365 584 aa11.29□□□□□ -0.6
ERCC8-205ENST00000477893 IRX5P78411 483 aaPredicted RBP11.29□□□□□ -0.6
ERCC8-205ENST00000477893 CYP27B1O15528 508 aa11.28□□□□□ -0.6
ERCC8-205ENST00000477893 NUBP1P53384 320 aa11.28□□□□□ -0.6
ERCC8-205ENST00000477893 AMER1Q5JTC6 1135 aaPredicted RBP11.28□□□□□ -0.6
ERCC8-205ENST00000477893 TMEM121BQ9BXQ6 578 aaPredicted RBP11.28□□□□□ -0.6
ERCC8-205ENST00000477893 PKD1L3Q7Z443 1732 aa11.27□□□□□ -0.61
ERCC8-205ENST00000477893 SLC15A2Q16348 729 aa11.27□□□□□ -0.61
ERCC8-205ENST00000477893 ZNF827Q17R98 1081 aa11.27□□□□□ -0.61
ERCC8-205ENST00000477893 MPRIPQ6WCQ1 1025 aa11.27□□□□□ -0.61
ERCC8-205ENST00000477893 LRRC4BQ9NT99 713 aa11.27□□□□□ -0.61
ERCC8-205ENST00000477893 PPP1R1BQ9UD71 204 aaPredicted RBP11.27□□□□□ -0.61
ERCC8-205ENST00000477893 SPG7Q9UQ90 795 aa11.27□□□□□ -0.61
ERCC8-205ENST00000477893 NCAPD2Q15021 1401 aa11.26□□□□□ -0.61
ERCC8-205ENST00000477893 TOGARAM1Q9Y4F4 1720 aa11.26□□□□□ -0.61
ERCC8-205ENST00000477893 AEBP1Q8IUX7 1158 aa11.26□□□□□ -0.61
ERCC8-205ENST00000477893 PAPPAQ13219 1627 aa11.25□□□□□ -0.61
ERCC8-205ENST00000477893 SNPHO15079 494 aa11.25□□□□□ -0.61
ERCC8-205ENST00000477893 SPON1Q9HCB6 807 aa11.25□□□□□ -0.61
ERCC8-205ENST00000477893 CCNL1Q9UK58 526 aaPredicted RBP11.25□□□□□ -0.61
ERCC8-205ENST00000477893 IGSF1Q8N6C5 1336 aa11.25□□□□□ -0.61
ERCC8-205ENST00000477893 CASZ1Q86V15 1759 aa11.25□□□□□ -0.61
ERCC8-205ENST00000477893 SULT6B1Q6IMI4 303 aa11.24□□□□□ -0.61
ERCC8-205ENST00000477893 PER1O15534 1290 aaPredicted RBP11.23□□□□□ -0.61
ERCC8-205ENST00000477893 PHKG2P15735 406 aa11.23□□□□□ -0.61
ERCC8-205ENST00000477893 MTHFSP49914 203 aa11.23□□□□□ -0.61
ERCC8-205ENST00000477893 SLC27A3Q5K4L6 730 aa11.23□□□□□ -0.61
ERCC8-205ENST00000477893 ZNF530Q6P9A1 599 aaPredicted RBP11.23□□□□□ -0.61
ERCC8-205ENST00000477893 OCEL1Q9H607 264 aa11.23□□□□□ -0.61
ERCC8-205ENST00000477893 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.23□□□□□ -0.61
ERCC8-205ENST00000477893 PALLDQ8WX93 1383 aa11.23□□□□□ -0.61
ERCC8-205ENST00000477893 HMOX1P09601 288 aa11.22□□□□□ -0.61
ERCC8-205ENST00000477893 IL13P35225 146 aa11.22□□□□□ -0.61
ERCC8-205ENST00000477893 IFNL2Q8IZJ0 200 aa11.22□□□□□ -0.61
ERCC8-205ENST00000477893 TMOD3Q9NYL9 352 aa11.22□□□□□ -0.61
ERCC8-205ENST00000477893 TFCP2L1Q9NZI6 479 aa11.22□□□□□ -0.61
ERCC8-205ENST00000477893 LY75O60449 1722 aa11.21□□□□□ -0.61
ERCC8-205ENST00000477893 PLEKHO1Q53GL0 409 aaPredicted RBP11.21□□□□□ -0.61
ERCC8-205ENST00000477893 PIGBQ92521 554 aa11.21□□□□□ -0.61
ERCC8-205ENST00000477893 FAM212AQ96EL1 285 aa11.21□□□□□ -0.61
ERCC8-205ENST00000477893 KLHL34Q8N239 644 aa11.2□□□□□ -0.62
ERCC8-205ENST00000477893 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.2□□□□□ -0.621e-6■■□□□ 11.7
ERCC8-205ENST00000477893 ITGB4P16144 1822 aa11.2□□□□□ -0.62
ERCC8-205ENST00000477893 PNPLA7Q6ZV29 1317 aa11.19□□□□□ -0.62
ERCC8-205ENST00000477893 U2SURPO15042 1029 aaKnown RBP11.19□□□□□ -0.62
ERCC8-205ENST00000477893 DIAPH1O60610 1272 aaKnown RBP11.19□□□□□ -0.62
ERCC8-205ENST00000477893 NKX1-1Q15270 411 aaPredicted RBP11.19□□□□□ -0.62
ERCC8-205ENST00000477893 C1orf141Q5JVX7 400 aa11.19□□□□□ -0.62
ERCC8-205ENST00000477893 MTFR1LQ9H019 292 aa11.19□□□□□ -0.62
ERCC8-205ENST00000477893 ZBTB47Q9UFB7 747 aaPredicted RBP11.19□□□□□ -0.62
ERCC8-205ENST00000477893 C5P01031 1676 aa11.19□□□□□ -0.62
ERCC8-205ENST00000477893 TUBGCP6Q96RT7 1819 aa11.19□□□□□ -0.62
ERCC8-205ENST00000477893 KDM6AO15550 1401 aaPredicted RBP11.18□□□□□ -0.62
ERCC8-205ENST00000477893 PHF14O94880 888 aa11.18□□□□□ -0.62
ERCC8-205ENST00000477893 PTGER2P43116 358 aa11.18□□□□□ -0.62
ERCC8-205ENST00000477893 SMIM5Q71RC9 77 aa11.18□□□□□ -0.62
ERCC8-205ENST00000477893 SMARCC1Q92922 1105 aaPredicted RBP11.18□□□□□ -0.62
ERCC8-205ENST00000477893 ASAP1Q9ULH1 1129 aa11.18□□□□□ -0.62
ERCC8-205ENST00000477893 CABP4P57796 275 aa11.17□□□□□ -0.62
ERCC8-205ENST00000477893 AMOTQ4VCS5 1084 aa11.17□□□□□ -0.62
ERCC8-205ENST00000477893 MSL1Q68DK7 614 aa11.17□□□□□ -0.62
ERCC8-205ENST00000477893 COL3A1P02461 1466 aaPredicted RBP11.17□□□□□ -0.62
ERCC8-205ENST00000477893 KDRP35968 1356 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms