RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 SKOR2Q2VWA4 1001 aaPredicted RBP11.87□□□□□ -0.51
CMC1-209ENST00000477739 TTC22Q5TAA0 569 aa11.87□□□□□ -0.51
CMC1-209ENST00000477739 UBE2Q2Q8WVN8 375 aa11.87□□□□□ -0.51
CMC1-209ENST00000477739 ZBTB9Q96C00 473 aa11.87□□□□□ -0.51
CMC1-209ENST00000477739 CLCN1P35523 988 aa11.87□□□□□ -0.51
CMC1-209ENST00000477739 RABEP1Q15276 862 aa11.87□□□□□ -0.51
CMC1-209ENST00000477739 PALD1Q9ULE6 856 aa11.87□□□□□ -0.51
CMC1-209ENST00000477739 PIP4K2AP48426 406 aaPredicted RBP11.87□□□□□ -0.51
CMC1-209ENST00000477739 USP25Q9UHP3 1055 aa11.87□□□□□ -0.51
CMC1-209ENST00000477739 THEMISQ8N1K5 641 aaPredicted RBP11.86□□□□□ -0.51
CMC1-209ENST00000477739 MAP3K19Q56UN5 1328 aa11.86□□□□□ -0.51
CMC1-209ENST00000477739 CAMK4Q16566 473 aa11.86□□□□□ -0.51
CMC1-209ENST00000477739 AK9Q5TCS8 1911 aa11.86□□□□□ -0.51
CMC1-209ENST00000477739 ERC2O15083 957 aa11.86□□□□□ -0.51
CMC1-209ENST00000477739 ZNF853P0CG23 659 aa11.86□□□□□ -0.51
CMC1-209ENST00000477739 PKNOX2Q96KN3 472 aa11.86□□□□□ -0.51
CMC1-209ENST00000477739 IGSF3O75054 1194 aa11.85□□□□□ -0.51
CMC1-209ENST00000477739 NUCB2P80303 420 aa11.85□□□□□ -0.51
CMC1-209ENST00000477739 FAM173BQ6P4H8 233 aa11.85□□□□□ -0.51
CMC1-209ENST00000477739 KIF2CQ99661 725 aa11.85□□□□□ -0.51
CMC1-209ENST00000477739 AATKQ6ZMQ8 1374 aa11.85□□□□□ -0.51
CMC1-209ENST00000477739 UQCRHLA0A096LP55 91 aa11.85□□□□□ -0.51
CMC1-209ENST00000477739 UQCRHP07919 91 aa11.85□□□□□ -0.51
CMC1-209ENST00000477739 MTHFSDQ2M296 383 aaKnown RBP11.85□□□□□ -0.51
CMC1-209ENST00000477739 CPSF1Q10570 1443 aaKnown RBP11.85□□□□□ -0.51
CMC1-209ENST00000477739 TMX3Q96JJ7 454 aa11.85□□□□□ -0.51
CMC1-209ENST00000477739 PNMA6EA0A0J9YXQ4 647 aa11.84□□□□□ -0.51
CMC1-209ENST00000477739 FSD2A1L4K1 749 aa11.84□□□□□ -0.51
CMC1-209ENST00000477739 GADD45BO75293 160 aaPredicted RBP11.84□□□□□ -0.51
CMC1-209ENST00000477739 CEP85Q6P2H3 762 aa11.84□□□□□ -0.51
CMC1-209ENST00000477739 TTC12Q9H892 705 aaPredicted RBP11.84□□□□□ -0.51
CMC1-209ENST00000477739 MSH6P52701 1360 aa11.84□□□□□ -0.51
CMC1-209ENST00000477739 ADGRB2O60241 1585 aa11.84□□□□□ -0.51
CMC1-209ENST00000477739 GOLGA6L4A6NEF3 574 aa11.84□□□□□ -0.51
CMC1-209ENST00000477739 RBM25P49756 843 aaKnown RBP11.84□□□□□ -0.51
CMC1-209ENST00000477739 UNC5CLQ8IV45 518 aa11.84□□□□□ -0.51
CMC1-209ENST00000477739 SIRT1Q96EB6 747 aa11.84□□□□□ -0.51
CMC1-209ENST00000477739 ZNF592Q92610 1267 aa11.84□□□□□ -0.51
CMC1-209ENST00000477739 DIP2BQ9P265 1576 aa11.83□□□□□ -0.51
CMC1-209ENST00000477739 NPHP1O15259 732 aa11.83□□□□□ -0.52
CMC1-209ENST00000477739 SRGAP3O43295 1099 aa11.83□□□□□ -0.52
CMC1-209ENST00000477739 UBTFL1P0CB47 393 aaPredicted RBP11.83□□□□□ -0.52
CMC1-209ENST00000477739 ZSCAN30Q86W11 494 aa11.83□□□□□ -0.52
CMC1-209ENST00000477739 STK11IPQ8N1F8 1099 aa11.83□□□□□ -0.52
CMC1-209ENST00000477739 USP26Q9BXU7 913 aa11.83□□□□□ -0.52
CMC1-209ENST00000477739 TMEM63CQ9P1W3 806 aa11.83□□□□□ -0.52
CMC1-209ENST00000477739 CPS1P31327 1500 aa11.83□□□□□ -0.52
CMC1-209ENST00000477739 RIMBP3CA6NJZ7 1639 aa11.83□□□□□ -0.52
CMC1-209ENST00000477739 RIMBP3BA6NNM3 1639 aa11.83□□□□□ -0.52
CMC1-209ENST00000477739 RIMBP3Q9UFD9 1639 aa11.83□□□□□ -0.52
CMC1-209ENST00000477739 PLEKHG3A1L390 1219 aa11.83□□□□□ -0.52
CMC1-209ENST00000477739 NECAB1Q8N987 351 aa11.83□□□□□ -0.52
CMC1-209ENST00000477739 ABCC4O15439 1325 aa11.83□□□□□ -0.52
CMC1-209ENST00000477739 CDK12Q9NYV4 1490 aaPredicted RBP11.83□□□□□ -0.52
CMC1-209ENST00000477739 CHL1O00533 1208 aa11.83□□□□□ -0.52
CMC1-209ENST00000477739 HCLS1P14317 486 aaPredicted RBP11.83□□□□□ -0.52
CMC1-209ENST00000477739 CCDC173Q0VFZ6 552 aa11.83□□□□□ -0.52
CMC1-209ENST00000477739 EYA1Q99502 592 aa11.83□□□□□ -0.52
CMC1-209ENST00000477739 PHAXQ9H814 394 aaKnown RBP11.83□□□□□ -0.52
CMC1-209ENST00000477739 GNAI2P04899 355 aa11.82□□□□□ -0.52
CMC1-209ENST00000477739 HDGFL1Q5TGJ6 251 aa11.82□□□□□ -0.52
CMC1-209ENST00000477739 CCDC83Q8IWF9 413 aa11.82□□□□□ -0.52
CMC1-209ENST00000477739 LRRCC1Q9C099 1032 aa11.82□□□□□ -0.52
CMC1-209ENST00000477739 BRPF1P55201 1214 aaPredicted RBP11.82□□□□□ -0.52
CMC1-209ENST00000477739 NDUFB9Q9Y6M9 179 aa11.82□□□□□ -0.52
CMC1-209ENST00000477739 PDE1AP54750 535 aa11.82□□□□□ -0.52
CMC1-209ENST00000477739 RPAP2Q8IXW5 612 aaPredicted RBP11.82□□□□□ -0.52
CMC1-209ENST00000477739 GPT2Q8TD30 523 aa11.82□□□□□ -0.52
CMC1-209ENST00000477739 CNPY2Q9Y2B0 182 aa11.82□□□□□ -0.52
CMC1-209ENST00000477739 AGLP35573 1532 aa11.81□□□□□ -0.52
CMC1-209ENST00000477739 KCNA6P17658 529 aa11.81□□□□□ -0.52
CMC1-209ENST00000477739 GIMAP6Q6P9H5 292 aa11.81□□□□□ -0.52
CMC1-209ENST00000477739 MX1P20591 662 aa11.81□□□□□ -0.52
CMC1-209ENST00000477739 PSME1Q06323 249 aa11.81□□□□□ -0.52
CMC1-209ENST00000477739 DIAPH3Q9NSV4 1193 aa11.81□□□□□ -0.52
CMC1-209ENST00000477739 C9orf78Q9NZ63 289 aaPredicted RBP11.81□□□□□ -0.52
CMC1-209ENST00000477739 PA2G4Q9UQ80 394 aaKnown RBP11.81□□□□□ -0.52
CMC1-209ENST00000477739 DLC1Q96QB1 1528 aa11.81□□□□□ -0.52
CMC1-209ENST00000477739 KIAA2012Q0VF49 1180 aa11.81□□□□□ -0.52
CMC1-209ENST00000477739 KLHL40Q2TBA0 621 aa11.81□□□□□ -0.52
CMC1-209ENST00000477739 TFIP11Q9UBB9 837 aaKnown RBP11.8□□□□□ -0.52
CMC1-209ENST00000477739 ZHX1Q9UKY1 873 aaPredicted RBP11.8□□□□□ -0.52
CMC1-209ENST00000477739 HSP90B1P14625 803 aaKnown RBP11.8□□□□□ -0.52
CMC1-209ENST00000477739 ESCO1Q5FWF5 840 aa11.8□□□□□ -0.52
CMC1-209ENST00000477739 CKAP2LQ8IYA6 745 aa11.8□□□□□ -0.52
CMC1-209ENST00000477739 ANKRD44Q8N8A2 993 aa11.8□□□□□ -0.52
CMC1-209ENST00000477739 DCTPP1Q9H773 170 aa11.8□□□□□ -0.52
CMC1-209ENST00000477739 SPATA31D1Q6ZQQ2 1576 aa11.8□□□□□ -0.52
CMC1-209ENST00000477739 GNAT3A8MTJ3 354 aa11.8□□□□□ -0.52
CMC1-209ENST00000477739 CCDC30Q5VVM6 783 aa11.8□□□□□ -0.52
CMC1-209ENST00000477739 LMBRD1Q9NUN5 540 aa11.8□□□□□ -0.52
CMC1-209ENST00000477739 SMC3Q9UQE7 1217 aa11.8□□□□□ -0.52
CMC1-209ENST00000477739 FLIIQ13045 1269 aa11.79□□□□□ -0.52
CMC1-209ENST00000477739 CIZ1Q9ULV3 898 aaPredicted RBP11.79□□□□□ -0.52
CMC1-209ENST00000477739 CASTP20810 708 aaKnown RBP11.79□□□□□ -0.52
CMC1-209ENST00000477739 SNX21Q969T3 373 aa11.79□□□□□ -0.52
CMC1-209ENST00000477739 CCDC8Q9H0W5 538 aaPredicted RBP11.79□□□□□ -0.52
CMC1-209ENST00000477739 TBX22Q9Y458 520 aa11.79□□□□□ -0.52
CMC1-209ENST00000477739 PTPRCP08575 1304 aa11.79□□□□□ -0.52
CMC1-209ENST00000477739 TTC21AQ8NDW8 1320 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms