RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 PAPPAQ13219 1627 aa13.06□□□□□ -0.32
NIFK-205ENST00000477693 LY75O60449 1722 aa13.06□□□□□ -0.32
NIFK-205ENST00000477693 ERVV-2B6SEH9 535 aa13.06□□□□□ -0.32
NIFK-205ENST00000477693 YY1P25490 414 aa13.06□□□□□ -0.32
NIFK-205ENST00000477693 AKAP4Q5JQC9 854 aa13.06□□□□□ -0.32
NIFK-205ENST00000477693 SLC27A3Q5K4L6 730 aa13.06□□□□□ -0.32
NIFK-205ENST00000477693 MPRIPQ6WCQ1 1025 aa13.06□□□□□ -0.32
NIFK-205ENST00000477693 PIGBQ92521 554 aa13.06□□□□□ -0.32
NIFK-205ENST00000477693 RSPH6AQ9H0K4 717 aa13.06□□□□□ -0.32
NIFK-205ENST00000477693 ITGB4P16144 1822 aa13.06□□□□□ -0.32
NIFK-205ENST00000477693 R3HDM1Q15032 1099 aaKnown RBP13.05□□□□□ -0.32
NIFK-205ENST00000477693 MTHFSDQ2M296 383 aaKnown RBP13.05□□□□□ -0.32
NIFK-205ENST00000477693 ANO8Q9HCE9 1232 aaPredicted RBP13.05□□□□□ -0.32
NIFK-205ENST00000477693 TMOD3Q9NYL9 352 aa13.05□□□□□ -0.32
NIFK-205ENST00000477693 FCHSD2O94868 740 aa13.04□□□□□ -0.32
NIFK-205ENST00000477693 U2AF1L5P0DN76 240 aaPredicted RBP13.04□□□□□ -0.32
NIFK-205ENST00000477693 U2AF1Q01081 240 aaKnown RBP eCLIP13.04□□□□□ -0.32
NIFK-205ENST00000477693 SMARCC1Q92922 1105 aaPredicted RBP13.04□□□□□ -0.32
NIFK-205ENST00000477693 LRRC4BQ9NT99 713 aa13.04□□□□□ -0.32
NIFK-205ENST00000477693 PALLDQ8WX93 1383 aa13.04□□□□□ -0.32
NIFK-205ENST00000477693 KAT6BQ8WYB5 2073 aa13.03□□□□□ -0.32
NIFK-205ENST00000477693 ADAMTS7Q9UKP4 1686 aa13.03□□□□□ -0.32
NIFK-205ENST00000477693 PRKAR2BP31323 418 aa13.03□□□□□ -0.32
NIFK-205ENST00000477693 GAS2L2Q8NHY3 880 aa13.03□□□□□ -0.32
NIFK-205ENST00000477693 MRC1P22897 1456 aa13.03□□□□□ -0.32
NIFK-205ENST00000477693 REM2Q8IYK8 340 aaPredicted RBP13.02□□□□□ -0.33
NIFK-205ENST00000477693 CCNL1Q9UK58 526 aaPredicted RBP13.02□□□□□ -0.33
NIFK-205ENST00000477693 SSUH2Q9Y2M2 353 aa13.02□□□□□ -0.33
NIFK-205ENST00000477693 SCN11AQ9UI33 1791 aa13.02□□□□□ -0.33
NIFK-205ENST00000477693 HMGB2P26583 209 aaKnown RBP13.01□□□□□ -0.33
NIFK-205ENST00000477693 CABP4P57796 275 aa13.01□□□□□ -0.33
NIFK-205ENST00000477693 SLC15A2Q16348 729 aa13.01□□□□□ -0.33
NIFK-205ENST00000477693 PHACTR3Q96KR7 559 aa13.01□□□□□ -0.33
NIFK-205ENST00000477693 STK32BQ9NY57 414 aa13.01□□□□□ -0.33
NIFK-205ENST00000477693 ASAP1Q9ULH1 1129 aa13.01□□□□□ -0.33
NIFK-205ENST00000477693 MAP3K5Q99683 1374 aa13.01□□□□□ -0.33
NIFK-205ENST00000477693 RNMTO43148 476 aaKnown RBP13□□□□□ -0.33
NIFK-205ENST00000477693 LGR6Q9HBX8 967 aa13□□□□□ -0.33
NIFK-205ENST00000477693 ATG3Q9NT62 314 aa13□□□□□ -0.33
NIFK-205ENST00000477693 GNAT3A8MTJ3 354 aa12.99□□□□□ -0.33
NIFK-205ENST00000477693 KCNQ4P56696 695 aa12.99□□□□□ -0.33
NIFK-205ENST00000477693 ZNF827Q17R98 1081 aa12.99□□□□□ -0.33
NIFK-205ENST00000477693 NFATC2IPQ8NCF5 419 aa12.99□□□□□ -0.33
NIFK-205ENST00000477693 PLEKHF1Q96S99 279 aa12.99□□□□□ -0.33
NIFK-205ENST00000477693 SLC52A2Q9HAB3 445 aa12.99□□□□□ -0.33
NIFK-205ENST00000477693 LOC102724428A0A0B4J2F2 783 aa12.98□□□□□ -0.33
NIFK-205ENST00000477693 SIK1P57059 783 aa12.98□□□□□ -0.33
NIFK-205ENST00000477693 PNNQ9H307 717 aaKnown RBP12.98□□□□□ -0.33
NIFK-205ENST00000477693 CASZ1Q86V15 1759 aa12.98□□□□□ -0.33
NIFK-205ENST00000477693 C5P01031 1676 aa12.98□□□□□ -0.33
NIFK-205ENST00000477693 ZNF831Q5JPB2 1677 aa12.98□□□□□ -0.33
NIFK-205ENST00000477693 CEMIPQ8WUJ3 1361 aa12.97□□□□□ -0.33
NIFK-205ENST00000477693 QSER1Q2KHR3 1735 aa12.97□□□□□ -0.33
NIFK-205ENST00000477693 MRS2Q9HD23 443 aa12.97□□□□□ -0.33
NIFK-205ENST00000477693 NEFMP07197 916 aa12.96□□□□□ -0.33
NIFK-205ENST00000477693 IL17REQ8NFR9 667 aa12.96□□□□□ -0.33
NIFK-205ENST00000477693 TAF1LQ8IZX4 1826 aa12.96□□□□□ -0.33
NIFK-205ENST00000477693 VIRMAQ69YN4 1812 aaKnown RBP12.95□□□□□ -0.34
NIFK-205ENST00000477693 C4BP0C0L5 1744 aa12.95□□□□□ -0.34
NIFK-205ENST00000477693 CICQ96RK0 1608 aaPredicted RBP12.95□□□□□ -0.34
NIFK-205ENST00000477693 HTATSF1O43719 755 aaKnown RBP12.94□□□□□ -0.34
NIFK-205ENST00000477693 ATP6V1AP38606 617 aa12.94□□□□□ -0.34
NIFK-205ENST00000477693 ITPK1Q13572 414 aa12.94□□□□□ -0.34
NIFK-205ENST00000477693 SLC4A9Q96Q91 983 aa12.94□□□□□ -0.34
NIFK-205ENST00000477693 PDGFDQ9GZP0 370 aaPredicted RBP12.94□□□□□ -0.34
NIFK-205ENST00000477693 TFCP2L1Q9NZI6 479 aa12.94□□□□□ -0.34
NIFK-205ENST00000477693 PNPLA7Q6ZV29 1317 aa12.93□□□□□ -0.34
NIFK-205ENST00000477693 MAPK8IP3Q9UPT6 1336 aa12.93□□□□□ -0.34
NIFK-205ENST00000477693 TUBGCP6Q96RT7 1819 aa12.93□□□□□ -0.34
NIFK-205ENST00000477693 TEFQ10587 303 aa12.93□□□□□ -0.34
NIFK-205ENST00000477693 WDR43Q15061 677 aaKnown RBP eCLIP12.93□□□□□ -0.34
NIFK-205ENST00000477693 NFE2L2Q16236 605 aa12.93□□□□□ -0.34
NIFK-205ENST00000477693 CHRDL2Q6WN34 429 aa12.93□□□□□ -0.34
NIFK-205ENST00000477693 LINC00116Q8NCU8 138 aa12.93□□□□□ -0.34
NIFK-205ENST00000477693 PPP1R1BQ9UD71 204 aaPredicted RBP12.93□□□□□ -0.34
NIFK-205ENST00000477693 SIPA1L3O60292 1781 aaPredicted RBP12.93□□□□□ -0.34
NIFK-205ENST00000477693 KCPQ6ZWJ8 1503 aa12.93□□□□□ -0.34
NIFK-205ENST00000477693 PTCD1O75127 700 aaKnown RBP12.92□□□□□ -0.34
NIFK-205ENST00000477693 PNISRQ8TF01 805 aaKnown RBP12.92□□□□□ -0.34
NIFK-205ENST00000477693 RTF1Q92541 710 aaKnown RBP12.92□□□□□ -0.34
NIFK-205ENST00000477693 COL5A3P25940 1745 aaPredicted RBP12.91□□□□□ -0.34
NIFK-205ENST00000477693 SLC39A6Q13433 755 aa12.91□□□□□ -0.34
NIFK-205ENST00000477693 MCM10Q7L590 875 aa12.91□□□□□ -0.34
NIFK-205ENST00000477693 SLC16A10Q8TF71 515 aa12.91□□□□□ -0.34
NIFK-205ENST00000477693 AK7Q96M32 723 aa12.91□□□□□ -0.34
NIFK-205ENST00000477693 MTFR1LQ9H019 292 aa12.91□□□□□ -0.34
NIFK-205ENST00000477693 SPON1Q9HCB6 807 aa12.91□□□□□ -0.34
NIFK-205ENST00000477693 ADAMTS8Q9UP79 889 aa12.91□□□□□ -0.34
NIFK-205ENST00000477693 UBR2Q8IWV8 1755 aa12.91□□□□□ -0.34
NIFK-205ENST00000477693 CNTNAP4Q9C0A0 1308 aa12.9□□□□□ -0.34
NIFK-205ENST00000477693 ZBTB7AO95365 584 aa12.9□□□□□ -0.34
NIFK-205ENST00000477693 RC3H1Q5TC82 1133 aaKnown RBP12.9□□□□□ -0.34
NIFK-205ENST00000477693 ZNF790Q6PG37 636 aa12.9□□□□□ -0.34
NIFK-205ENST00000477693 POTEHQ6S545 545 aa12.9□□□□□ -0.34
NIFK-205ENST00000477693 FLAD1Q8NFF5 587 aa12.9□□□□□ -0.34
NIFK-205ENST00000477693 UBR3Q6ZT12 1888 aa12.89□□□□□ -0.35
NIFK-205ENST00000477693 TJP1Q07157 1748 aa12.89□□□□□ -0.35
NIFK-205ENST00000477693 SSFA2P28290 1259 aa12.89□□□□□ -0.35
NIFK-205ENST00000477693 DCTN1Q14203 1278 aa12.89□□□□□ -0.35
NIFK-205ENST00000477693 AMIGO3Q86WK7 504 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms