RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 GOLGA2Q08379 1002 aa21.13■□□□□ 0.97
VHL-203ENST00000477538 FAM196AQ6ZSG2 479 aa21.13■□□□□ 0.97
VHL-203ENST00000477538 ACSBG1Q96GR2 724 aa21.13■□□□□ 0.97
VHL-203ENST00000477538 TAF7Q15545 349 aaPredicted RBP21.12■□□□□ 0.97
VHL-203ENST00000477538 NFATC2IPQ8NCF5 419 aa21.12■□□□□ 0.97
VHL-203ENST00000477538 TMOD3Q9NYL9 352 aa21.12■□□□□ 0.97
VHL-203ENST00000477538 LAS1LQ9Y4W2 734 aaKnown RBP21.12■□□□□ 0.97
VHL-203ENST00000477538 TNS1Q9HBL0 1735 aaKnown RBP21.12■□□□□ 0.97
VHL-203ENST00000477538 PRIM1P49642 420 aaKnown RBP21.11■□□□□ 0.97
VHL-203ENST00000477538 SYTL4Q96C24 671 aaPredicted RBP21.11■□□□□ 0.97
VHL-203ENST00000477538 IFT57Q9NWB7 429 aa21.11■□□□□ 0.97
VHL-203ENST00000477538 GNAI1P63096 354 aa21.1■□□□□ 0.97
VHL-203ENST00000477538 CFAP44Q96MT7 982 aa21.1■□□□□ 0.97
VHL-203ENST00000477538 BTBD11A6QL63 1104 aa21.08■□□□□ 0.97
VHL-203ENST00000477538 ZNF853P0CG23 659 aa21.08■□□□□ 0.97
VHL-203ENST00000477538 PIGBQ92521 554 aa21.08■□□□□ 0.97
VHL-203ENST00000477538 CDCA7LQ96GN5 454 aa21.08■□□□□ 0.97
VHL-203ENST00000477538 SPINK5Q9NQ38 1064 aaPredicted RBP21.08■□□□□ 0.97
VHL-203ENST00000477538 LY75O60449 1722 aa21.07■□□□□ 0.96
VHL-203ENST00000477538 E9PSI1 815 aa21.07■□□□□ 0.96
VHL-203ENST00000477538 CHL1O00533 1208 aa21.07■□□□□ 0.96
VHL-203ENST00000477538 KCNQ2O43526 872 aa21.07■□□□□ 0.96
VHL-203ENST00000477538 SLFN5Q08AF3 891 aa21.07■□□□□ 0.96
VHL-203ENST00000477538 BABAM1Q9NWV8 329 aa21.07■□□□□ 0.96
VHL-203ENST00000477538 MIS18AQ9NYP9 233 aa21.07■□□□□ 0.96
VHL-203ENST00000477538 TSPYL4Q9UJ04 414 aa21.07■□□□□ 0.96
VHL-203ENST00000477538 MYH16Q9H6N6 1097 aa21.06■□□□□ 0.96
VHL-203ENST00000477538 MBIPQ9NS73 344 aa21.06■□□□□ 0.96
VHL-203ENST00000477538 C5P01031 1676 aa21.05■□□□□ 0.96
VHL-203ENST00000477538 TSR2Q969E8 191 aaKnown RBP21.05■□□□□ 0.96
VHL-203ENST00000477538 LAMB4A4D0S4 1761 aa21.05■□□□□ 0.96
VHL-203ENST00000477538 FANCIQ9NVI1 1328 aa21.04■□□□□ 0.96
VHL-203ENST00000477538 SLC39A6Q13433 755 aa21.04■□□□□ 0.96
VHL-203ENST00000477538 KCPQ6ZWJ8 1503 aa21.04■□□□□ 0.96
VHL-203ENST00000477538 PTF1AQ7RTS3 328 aa21.03■□□□□ 0.96
VHL-203ENST00000477538 BCL11BQ9C0K0 894 aaPredicted RBP21.03■□□□□ 0.96
VHL-203ENST00000477538 CACNA1FO60840 1977 aa21.03■□□□□ 0.96
VHL-203ENST00000477538 RGPD3A6NKT7 1758 aaPredicted RBP21.02■□□□□ 0.96
VHL-203ENST00000477538 RGPD4Q7Z3J3 1758 aa21.02■□□□□ 0.96
VHL-203ENST00000477538 ZNF831Q5JPB2 1677 aa21.02■□□□□ 0.96
VHL-203ENST00000477538 EP400Q96L91 3159 aa21.02■□□□□ 0.96
VHL-203ENST00000477538 TAF1LQ8IZX4 1826 aa21.02■□□□□ 0.96
VHL-203ENST00000477538 TRIM37O94972 964 aa21.02■□□□□ 0.96
VHL-203ENST00000477538 ZNF790Q6PG37 636 aa21.02■□□□□ 0.96
VHL-203ENST00000477538 TTC5Q8N0Z6 440 aa21.02■□□□□ 0.96
VHL-203ENST00000477538 ASAP1Q9ULH1 1129 aa21.02■□□□□ 0.96
VHL-203ENST00000477538 TJP1Q07157 1748 aa21.01■□□□□ 0.95
VHL-203ENST00000477538 KCNQ3O43525 872 aa21.01■□□□□ 0.95
VHL-203ENST00000477538 DUSP27Q5VZP5 1158 aa21.01■□□□□ 0.95
VHL-203ENST00000477538 TRMT2AQ8IZ69 625 aaKnown RBP21.01■□□□□ 0.95
VHL-203ENST00000477538 ATG3Q9NT62 314 aa21.01■□□□□ 0.95
VHL-203ENST00000477538 CICQ96RK0 1608 aaPredicted RBP21■□□□□ 0.95
VHL-203ENST00000477538 COL5A3P25940 1745 aaPredicted RBP20.98■□□□□ 0.95
VHL-203ENST00000477538 EIF4A1P60842 406 aaKnown RBP20.98■□□□□ 0.95
VHL-203ENST00000477538 SMARCC1Q92922 1105 aaPredicted RBP20.98■□□□□ 0.95
VHL-203ENST00000477538 PALLDQ8WX93 1383 aa20.97■□□□□ 0.95
VHL-203ENST00000477538 ZNF496Q96IT1 587 aaPredicted RBP20.96■□□□□ 0.95
VHL-203ENST00000477538 FMNL2Q96PY5 1086 aa20.96■□□□□ 0.95
VHL-203ENST00000477538 PTCD1O75127 700 aaKnown RBP20.95■□□□□ 0.94
VHL-203ENST00000477538 EXOSC9Q06265 439 aaKnown RBP20.95■□□□□ 0.94
VHL-203ENST00000477538 KRT24Q2M2I5 525 aa20.95■□□□□ 0.94
VHL-203ENST00000477538 RBM42Q9BTD8 480 aaKnown RBP20.95■□□□□ 0.94
VHL-203ENST00000477538 HEG1Q9ULI3 1381 aa20.95■□□□□ 0.94
VHL-203ENST00000477538 C8orf58Q8NAV2 365 aa20.93■□□□□ 0.94
VHL-203ENST00000477538 MYH14Q7Z406 1995 aaKnown RBP20.93■□□□□ 0.94
VHL-203ENST00000477538 APBA3O96018 575 aa20.92■□□□□ 0.94
VHL-203ENST00000477538 TSPYL6Q8N831 410 aa20.92■□□□□ 0.94
VHL-203ENST00000477538 LOC102724428A0A0B4J2F2 783 aa20.91■□□□□ 0.94
VHL-203ENST00000477538 ELL2O00472 640 aaPredicted RBP20.91■□□□□ 0.94
VHL-203ENST00000477538 GIGYF1O75420 1035 aaPredicted RBP20.91■□□□□ 0.94
VHL-203ENST00000477538 SIK1P57059 783 aa20.91■□□□□ 0.94
VHL-203ENST00000477538 TWISTNBQ3B726 338 aaPredicted RBP20.91■□□□□ 0.94
VHL-203ENST00000477538 RREB1Q92766 1687 aa20.91■□□□□ 0.94
VHL-203ENST00000477538 SNRPA1P09661 255 aaKnown RBP20.9■□□□□ 0.94
VHL-203ENST00000477538 VSIG10Q8N0Z9 540 aa20.9■□□□□ 0.94
VHL-203ENST00000477538 SOS1Q07889 1333 aaPredicted RBP20.89■□□□□ 0.93
VHL-203ENST00000477538 HOXB7P09629 217 aa20.89■□□□□ 0.93
VHL-203ENST00000477538 SF3B2Q13435 895 aaKnown RBP20.89■□□□□ 0.93
VHL-203ENST00000477538 SLC4A9Q96Q91 983 aa20.89■□□□□ 0.93
VHL-203ENST00000477538 PRAMEF22A3QJZ6 481 aa20.88■□□□□ 0.93
VHL-203ENST00000477538 PLSCR1O15162 318 aa20.88■□□□□ 0.93
VHL-203ENST00000477538 ATP6V1AP38606 617 aa20.88■□□□□ 0.93
VHL-203ENST00000477538 VAMP4O75379 141 aa20.87■□□□□ 0.93
VHL-203ENST00000477538 CT47B1P0C2W7 299 aaPredicted RBP20.87■□□□□ 0.93
VHL-203ENST00000477538 ILDR2Q71H61 639 aa20.87■□□□□ 0.93
VHL-203ENST00000477538 CCNL1Q9UK58 526 aaPredicted RBP20.87■□□□□ 0.93
VHL-203ENST00000477538 C4BP0C0L5 1744 aa20.87■□□□□ 0.93
VHL-203ENST00000477538 NUP188Q5SRE5 1749 aa20.87■□□□□ 0.93
VHL-203ENST00000477538 CCDC125Q86Z20 511 aa20.86■□□□□ 0.93
VHL-203ENST00000477538 DNAJC10Q8IXB1 793 aa20.86■□□□□ 0.93
VHL-203ENST00000477538 TEX13AQ9BXU3 409 aaPredicted RBP20.86■□□□□ 0.93
VHL-203ENST00000477538 USP16Q9Y5T5 823 aa20.85■□□□□ 0.93
VHL-203ENST00000477538 TUBGCP6Q96RT7 1819 aa20.85■□□□□ 0.93
VHL-203ENST00000477538 UBR3Q6ZT12 1888 aa20.84■□□□□ 0.93
VHL-203ENST00000477538 EIF2S2P20042 333 aaKnown RBP20.84■□□□□ 0.93
VHL-203ENST00000477538 BAG6P46379 1132 aa20.84■□□□□ 0.93
VHL-203ENST00000477538 ITPK1Q13572 414 aa20.84■□□□□ 0.93
VHL-203ENST00000477538 HDGFL1Q5TGJ6 251 aa20.84■□□□□ 0.93
VHL-203ENST00000477538 KCNQ4P56696 695 aa20.83■□□□□ 0.93
VHL-203ENST00000477538 TXNRD1Q16881 649 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 160.3 ms