RNA–Protein interactions for RNA: ENST00000477424.2

C4A-253, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-253ENST00000477424 TJP1Q07157 1748 aa23.96■■□□□ 1.43
C4A-253ENST00000477424 CABP4P57796 275 aa23.95■■□□□ 1.42
C4A-253ENST00000477424 LGR6Q9HBX8 967 aa23.95■■□□□ 1.42
C4A-253ENST00000477424 TFCP2L1Q9NZI6 479 aa23.95■■□□□ 1.42
C4A-253ENST00000477424 ATF5Q9Y2D1 282 aaPredicted RBP23.95■■□□□ 1.42
C4A-253ENST00000477424 CICQ96RK0 1608 aaPredicted RBP23.95■■□□□ 1.42
C4A-253ENST00000477424 PTGER2P43116 358 aa23.94■■□□□ 1.42
C4A-253ENST00000477424 ITPK1Q13572 414 aa23.94■■□□□ 1.42
C4A-253ENST00000477424 PRKAR2BP31323 418 aa23.93■■□□□ 1.42
C4A-253ENST00000477424 NFATC2IPQ8NCF5 419 aa23.93■■□□□ 1.42
C4A-253ENST00000477424 LINC00116Q8NCU8 138 aa23.93■■□□□ 1.42
C4A-253ENST00000477424 SLC4A9Q96Q91 983 aa23.93■■□□□ 1.42
C4A-253ENST00000477424 RNMTO43148 476 aaKnown RBP23.92■■□□□ 1.42
C4A-253ENST00000477424 U2AF1L5P0DN76 240 aaPredicted RBP23.92■■□□□ 1.42
C4A-253ENST00000477424 U2AF1Q01081 240 aaKnown RBP eCLIP23.92■■□□□ 1.42
C4A-253ENST00000477424 AMIGO3Q86WK7 504 aa23.92■■□□□ 1.42
C4A-253ENST00000477424 PHACTR3Q96KR7 559 aa23.92■■□□□ 1.42
C4A-253ENST00000477424 MTFR1LQ9H019 292 aa23.92■■□□□ 1.42
C4A-253ENST00000477424 NUDCQ9Y266 331 aa23.92■■□□□ 1.42
C4A-253ENST00000477424 UBR2Q8IWV8 1755 aa23.92■■□□□ 1.42
C4A-253ENST00000477424 MYH14Q7Z406 1995 aaKnown RBP23.92■■□□□ 1.42
C4A-253ENST00000477424 DLG5Q8TDM6 1919 aa23.92■■□□□ 1.42
C4A-253ENST00000477424 SGIP1Q9BQI5 828 aa23.91■■□□□ 1.42
C4A-253ENST00000477424 MAP3K5Q99683 1374 aa23.91■■□□□ 1.42
C4A-253ENST00000477424 SLC52A2Q9HAB3 445 aa23.9■■□□□ 1.42
C4A-253ENST00000477424 ATP6V1AP38606 617 aa23.89■■□□□ 1.41
C4A-253ENST00000477424 COL23A1Q86Y22 540 aaPredicted RBP23.89■■□□□ 1.41
C4A-253ENST00000477424 RALBP1Q15311 655 aa23.88■■□□□ 1.41
C4A-253ENST00000477424 SMIM5Q71RC9 77 aa23.88■■□□□ 1.41
C4A-253ENST00000477424 GAS2L2Q8NHY3 880 aa23.88■■□□□ 1.41
C4A-253ENST00000477424 KCPQ6ZWJ8 1503 aa23.88■■□□□ 1.41
C4A-253ENST00000477424 RBM42Q9BTD8 480 aaKnown RBP23.87■■□□□ 1.41
C4A-253ENST00000477424 AK7Q96M32 723 aa23.86■■□□□ 1.41
C4A-253ENST00000477424 PPP1R1BQ9UD71 204 aaPredicted RBP23.86■■□□□ 1.41
C4A-253ENST00000477424 C4AP0C0L4 1744 aa23.85■■□□□ 1.41
C4A-253ENST00000477424 FCHSD2O94868 740 aa23.85■■□□□ 1.41
C4A-253ENST00000477424 GNAT3A8MTJ3 354 aa23.84■■□□□ 1.41
C4A-253ENST00000477424 PTCD1O75127 700 aaKnown RBP23.84■■□□□ 1.41
C4A-253ENST00000477424 IL17REQ8NFR9 667 aa23.84■■□□□ 1.41
C4A-253ENST00000477424 SLC16A10Q8TF71 515 aa23.84■■□□□ 1.41
C4A-253ENST00000477424 SLC39A6Q13433 755 aa23.83■■□□□ 1.41
C4A-253ENST00000477424 MYBBP1AQ9BQG0 1328 aaKnown RBP23.83■■□□□ 1.4
C4A-253ENST00000477424 CEMIPQ8WUJ3 1361 aa23.82■■□□□ 1.4
C4A-253ENST00000477424 PHF14O94880 888 aa23.82■■□□□ 1.4
C4A-253ENST00000477424 MSH5O43196 834 aa23.81■■□□□ 1.4
C4A-253ENST00000477424 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.8■■□□□ 1.4
C4A-253ENST00000477424 GNPATO15228 680 aa23.8■■□□□ 1.4
C4A-253ENST00000477424 HMGB2P26583 209 aaKnown RBP23.8■■□□□ 1.4
C4A-253ENST00000477424 MSL1Q68DK7 614 aa23.79■■□□□ 1.4
C4A-253ENST00000477424 CNTNAP4Q9C0A0 1308 aa23.79■■□□□ 1.4
C4A-253ENST00000477424 SSFA2P28290 1259 aa23.78■■□□□ 1.4
C4A-253ENST00000477424 FLAD1Q8NFF5 587 aa23.78■■□□□ 1.4
C4A-253ENST00000477424 PLEKHF1Q96S99 279 aa23.78■■□□□ 1.4
C4A-253ENST00000477424 PRKRIP1Q9H875 184 aaPredicted RBP23.78■■□□□ 1.4
C4A-253ENST00000477424 ARXQ96QS3 562 aa23.77■■□□□ 1.4
C4A-253ENST00000477424 FHDC1Q9C0D6 1143 aaPredicted RBP23.77■■□□□ 1.4
C4A-253ENST00000477424 TEFQ10587 303 aa23.75■■□□□ 1.39
C4A-253ENST00000477424 DNAJC10Q8IXB1 793 aa23.75■■□□□ 1.39
C4A-253ENST00000477424 CRKLP46109 303 aaKnown RBP23.74■■□□□ 1.39
C4A-253ENST00000477424 RC3H1Q5TC82 1133 aaKnown RBP23.74■■□□□ 1.39
C4A-253ENST00000477424 MCM10Q7L590 875 aa23.74■■□□□ 1.39
C4A-253ENST00000477424 ZNF316A6NFI3 1004 aaPredicted RBP23.73■■□□□ 1.39
C4A-253ENST00000477424 POLD1P28340 1107 aa23.73■■□□□ 1.39
C4A-253ENST00000477424 DCTN1Q14203 1278 aa23.73■■□□□ 1.39
C4A-253ENST00000477424 KDM3BQ7LBC6 1761 aa23.72■■□□□ 1.39
C4A-253ENST00000477424 SYT17Q9BSW7 474 aa23.71■■□□□ 1.39
C4A-253ENST00000477424 RTCBQ9Y3I0 505 aaKnown RBP23.71■■□□□ 1.39
C4A-253ENST00000477424 KCNQ3O43525 872 aa23.7■■□□□ 1.38
C4A-253ENST00000477424 RPS6KA4O75676 772 aa23.7■■□□□ 1.38
C4A-253ENST00000477424 INTS5Q6P9B9 1019 aaKnown RBP23.7■■□□□ 1.38
C4A-253ENST00000477424 ZNF790Q6PG37 636 aa23.7■■□□□ 1.38
C4A-253ENST00000477424 ZNF496Q96IT1 587 aaPredicted RBP23.7■■□□□ 1.38
C4A-253ENST00000477424 TTC5Q8N0Z6 440 aa23.69■■□□□ 1.38
C4A-253ENST00000477424 RTF1Q92541 710 aaKnown RBP23.69■■□□□ 1.38
C4A-253ENST00000477424 HEG1Q9ULI3 1381 aa23.68■■□□□ 1.38
C4A-253ENST00000477424 CYP19A1P11511 503 aaPredicted RBP23.68■■□□□ 1.38
C4A-253ENST00000477424 NFE2L2Q16236 605 aa23.68■■□□□ 1.38
C4A-253ENST00000477424 ARHGEF1Q92888 912 aaKnown RBP23.68■■□□□ 1.38
C4A-253ENST00000477424 MAPK8IP3Q9UPT6 1336 aa23.67■■□□□ 1.38
C4A-253ENST00000477424 HTATSF1O43719 755 aaKnown RBP23.67■■□□□ 1.38
C4A-253ENST00000477424 ADRA2BP18089 450 aa23.67■■□□□ 1.38
C4A-253ENST00000477424 TRAPPC3LQ5T215 181 aa23.67■■□□□ 1.38
C4A-253ENST00000477424 VSIG10Q8N0Z9 540 aa23.67■■□□□ 1.38
C4A-253ENST00000477424 BTBD11A6QL63 1104 aa23.66■■□□□ 1.38
C4A-253ENST00000477424 NEFMP07197 916 aa23.66■■□□□ 1.38
C4A-253ENST00000477424 KLHL34Q8N239 644 aa23.66■■□□□ 1.38
C4A-253ENST00000477424 CCDC87Q9NVE4 849 aa23.66■■□□□ 1.38
C4A-253ENST00000477424 LAMB4A4D0S4 1761 aa23.65■■□□□ 1.38
C4A-253ENST00000477424 SOS1Q07889 1333 aaPredicted RBP23.64■■□□□ 1.38
C4A-253ENST00000477424 THUMPD2Q9BTF0 503 aaKnown RBP23.64■■□□□ 1.37
C4A-253ENST00000477424 ZBTB1Q9Y2K1 713 aa23.64■■□□□ 1.37
C4A-253ENST00000477424 KIF13BQ9NQT8 1826 aa23.63■■□□□ 1.37
C4A-253ENST00000477424 CCDC146Q8IYE0 955 aa23.63■■□□□ 1.37
C4A-253ENST00000477424 NLGN2Q8NFZ4 835 aa23.63■■□□□ 1.37
C4A-253ENST00000477424 PNNQ9H307 717 aaKnown RBP23.63■■□□□ 1.37
C4A-253ENST00000477424 GYS1P13807 737 aa23.62■■□□□ 1.37
C4A-253ENST00000477424 FMNL2Q96PY5 1086 aa23.62■■□□□ 1.37
C4A-253ENST00000477424 SRP68Q9UHB9 627 aaKnown RBP23.62■■□□□ 1.37
C4A-253ENST00000477424 KIAA1551Q9HCM1 1747 aa23.62■■□□□ 1.37
C4A-253ENST00000477424 RFC4P35249 363 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms