RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 ITGB4P16144 1822 aa17.88■□□□□ 0.45
ACTN4-205ENST00000477174 LY75O60449 1722 aa17.87■□□□□ 0.45
ACTN4-205ENST00000477174 NEFMP07197 916 aa17.87■□□□□ 0.45
ACTN4-205ENST00000477174 IL17REQ8NFR9 667 aa17.87■□□□□ 0.45
ACTN4-205ENST00000477174 SLC16A10Q8TF71 515 aa17.87■□□□□ 0.45
ACTN4-205ENST00000477174 ZBTB7AO95365 584 aa17.86■□□□□ 0.45
ACTN4-205ENST00000477174 FLAD1Q8NFF5 587 aa17.86■□□□□ 0.45
ACTN4-205ENST00000477174 RBM42Q9BTD8 480 aaKnown RBP17.86■□□□□ 0.45
ACTN4-205ENST00000477174 MTFR1LQ9H019 292 aa17.86■□□□□ 0.45
ACTN4-205ENST00000477174 MAP3K5Q99683 1374 aa17.86■□□□□ 0.45
ACTN4-205ENST00000477174 PAPPAQ13219 1627 aa17.86■□□□□ 0.45
ACTN4-205ENST00000477174 PNPLA7Q6ZV29 1317 aa17.85■□□□□ 0.45
ACTN4-205ENST00000477174 HTATSF1O43719 755 aaKnown RBP17.84■□□□□ 0.45
ACTN4-205ENST00000477174 PTCD1O75127 700 aaKnown RBP17.84■□□□□ 0.45
ACTN4-205ENST00000477174 ITPK1Q13572 414 aa17.84■□□□□ 0.45
ACTN4-205ENST00000477174 AK7Q96M32 723 aa17.84■□□□□ 0.45
ACTN4-205ENST00000477174 SLC4A9Q96Q91 983 aa17.84■□□□□ 0.45
ACTN4-205ENST00000477174 PLEKHF1Q96S99 279 aa17.84■□□□□ 0.45
ACTN4-205ENST00000477174 TEFQ10587 303 aa17.83■□□□□ 0.44
ACTN4-205ENST00000477174 LINC00116Q8NCU8 138 aa17.83■□□□□ 0.44
ACTN4-205ENST00000477174 RTF1Q92541 710 aaKnown RBP17.83■□□□□ 0.44
ACTN4-205ENST00000477174 ATF5Q9Y2D1 282 aaPredicted RBP17.83■□□□□ 0.44
ACTN4-205ENST00000477174 RC3H1Q5TC82 1133 aaKnown RBP17.82■□□□□ 0.44
ACTN4-205ENST00000477174 COL23A1Q86Y22 540 aaPredicted RBP17.82■□□□□ 0.44
ACTN4-205ENST00000477174 LRP5O75197 1615 aa17.82■□□□□ 0.44
ACTN4-205ENST00000477174 PTGER2P43116 358 aa17.81■□□□□ 0.44
ACTN4-205ENST00000477174 PPP1R1BQ9UD71 204 aaPredicted RBP17.81■□□□□ 0.44
ACTN4-205ENST00000477174 CEMIPQ8WUJ3 1361 aa17.8■□□□□ 0.44
ACTN4-205ENST00000477174 SSFA2P28290 1259 aa17.8■□□□□ 0.44
ACTN4-205ENST00000477174 SLC39A6Q13433 755 aa17.8■□□□□ 0.44
ACTN4-205ENST00000477174 MSH5O43196 834 aa17.79■□□□□ 0.44
ACTN4-205ENST00000477174 SGIP1Q9BQI5 828 aa17.79■□□□□ 0.44
ACTN4-205ENST00000477174 MRC1P22897 1456 aa17.79■□□□□ 0.44
ACTN4-205ENST00000477174 CASZ1Q86V15 1759 aa17.79■□□□□ 0.44
ACTN4-205ENST00000477174 SCN11AQ9UI33 1791 aa17.79■□□□□ 0.44
ACTN4-205ENST00000477174 MAPK8IP3Q9UPT6 1336 aa17.78■□□□□ 0.44
ACTN4-205ENST00000477174 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.78■□□□□ 0.44
ACTN4-205ENST00000477174 GNPATO15228 680 aa17.78■□□□□ 0.44
ACTN4-205ENST00000477174 WDR43Q15061 677 aaKnown RBP eCLIP17.78■□□□□ 0.44
ACTN4-205ENST00000477174 NFE2L2Q16236 605 aa17.78■□□□□ 0.44
ACTN4-205ENST00000477174 TTC5Q8N0Z6 440 aa17.78■□□□□ 0.44
ACTN4-205ENST00000477174 VSIG10Q8N0Z9 540 aa17.78■□□□□ 0.44
ACTN4-205ENST00000477174 CNTNAP4Q9C0A0 1308 aa17.77■□□□□ 0.44
ACTN4-205ENST00000477174 ZNF790Q6PG37 636 aa17.77■□□□□ 0.44
ACTN4-205ENST00000477174 MCM10Q7L590 875 aa17.77■□□□□ 0.44
ACTN4-205ENST00000477174 RTCBQ9Y3I0 505 aaKnown RBP17.77■□□□□ 0.44
ACTN4-205ENST00000477174 ADAMTS7Q9UKP4 1686 aa17.77■□□□□ 0.43
ACTN4-205ENST00000477174 BTBD11A6QL63 1104 aa17.76■□□□□ 0.43
ACTN4-205ENST00000477174 POLD1P28340 1107 aa17.76■□□□□ 0.43
ACTN4-205ENST00000477174 TRAPPC3LQ5T215 181 aa17.76■□□□□ 0.43
ACTN4-205ENST00000477174 AMIGO3Q86WK7 504 aa17.76■□□□□ 0.43
ACTN4-205ENST00000477174 RPS6KA4O75676 772 aa17.75■□□□□ 0.43
ACTN4-205ENST00000477174 ADRA2BP18089 450 aa17.75■□□□□ 0.43
ACTN4-205ENST00000477174 ADAMTS8Q9UP79 889 aa17.75■□□□□ 0.43
ACTN4-205ENST00000477174 C4BP0C0L5 1744 aa17.75■□□□□ 0.43
ACTN4-205ENST00000477174 C5P01031 1676 aa17.74■□□□□ 0.43
ACTN4-205ENST00000477174 ANP32CO43423 234 aa17.74■□□□□ 0.43
ACTN4-205ENST00000477174 PHF14O94880 888 aa17.74■□□□□ 0.43
ACTN4-205ENST00000477174 CRKLP46109 303 aaKnown RBP17.74■□□□□ 0.43
ACTN4-205ENST00000477174 DCTN1Q14203 1278 aa17.74■□□□□ 0.43
ACTN4-205ENST00000477174 TAF7Q15545 349 aaPredicted RBP17.74■□□□□ 0.43
ACTN4-205ENST00000477174 DNAJC10Q8IXB1 793 aa17.74■□□□□ 0.43
ACTN4-205ENST00000477174 ARXQ96QS3 562 aa17.74■□□□□ 0.43
ACTN4-205ENST00000477174 TEX13AQ9BXU3 409 aaPredicted RBP17.74■□□□□ 0.43
ACTN4-205ENST00000477174 ZNF831Q5JPB2 1677 aa17.74■□□□□ 0.43
ACTN4-205ENST00000477174 TAF1LQ8IZX4 1826 aa17.73■□□□□ 0.43
ACTN4-205ENST00000477174 CYP19A1P11511 503 aaPredicted RBP17.73■□□□□ 0.43
ACTN4-205ENST00000477174 INTS5Q6P9B9 1019 aaKnown RBP17.73■□□□□ 0.43
ACTN4-205ENST00000477174 RUNDC1Q96C34 613 aa17.73■□□□□ 0.43
ACTN4-205ENST00000477174 ZNF496Q96IT1 587 aaPredicted RBP17.73■□□□□ 0.43
ACTN4-205ENST00000477174 QSER1Q2KHR3 1735 aa17.72■□□□□ 0.43
ACTN4-205ENST00000477174 STARD3NLO95772 234 aa17.72■□□□□ 0.43
ACTN4-205ENST00000477174 RIPK4P57078 832 aa17.72■□□□□ 0.43
ACTN4-205ENST00000477174 SMIM5Q71RC9 77 aa17.72■□□□□ 0.43
ACTN4-205ENST00000477174 FMNL2Q96PY5 1086 aa17.72■□□□□ 0.43
ACTN4-205ENST00000477174 TMPOP42166 694 aaKnown RBP17.71■□□□□ 0.43
ACTN4-205ENST00000477174 PNISRQ8TF01 805 aaKnown RBP17.71■□□□□ 0.43
ACTN4-205ENST00000477174 ARHGEF1Q92888 912 aaKnown RBP17.71■□□□□ 0.43
ACTN4-205ENST00000477174 CCDC87Q9NVE4 849 aa17.71■□□□□ 0.43
ACTN4-205ENST00000477174 RFC4P35249 363 aa17.7■□□□□ 0.42
ACTN4-205ENST00000477174 LMOD3Q0VAK6 560 aa17.7■□□□□ 0.42
ACTN4-205ENST00000477174 HEG1Q9ULI3 1381 aa17.69■□□□□ 0.42
ACTN4-205ENST00000477174 KCPQ6ZWJ8 1503 aa17.69■□□□□ 0.42
ACTN4-205ENST00000477174 KCNQ3O43525 872 aa17.69■□□□□ 0.42
ACTN4-205ENST00000477174 MSL1Q68DK7 614 aa17.69■□□□□ 0.42
ACTN4-205ENST00000477174 CCDC146Q8IYE0 955 aa17.69■□□□□ 0.42
ACTN4-205ENST00000477174 NLGN1Q8N2Q7 840 aa17.69■□□□□ 0.42
ACTN4-205ENST00000477174 FHDC1Q9C0D6 1143 aaPredicted RBP17.69■□□□□ 0.42
ACTN4-205ENST00000477174 SYT17Q9BSW7 474 aa17.68■□□□□ 0.42
ACTN4-205ENST00000477174 SNRPA1P09661 255 aaKnown RBP17.67■□□□□ 0.42
ACTN4-205ENST00000477174 THUMPD2Q9BTF0 503 aaKnown RBP17.66■□□□□ 0.42
ACTN4-205ENST00000477174 BABAM1Q9NWV8 329 aa17.66■□□□□ 0.42
ACTN4-205ENST00000477174 MIS18AQ9NYP9 233 aa17.66■□□□□ 0.42
ACTN4-205ENST00000477174 TUBGCP6Q96RT7 1819 aa17.65■□□□□ 0.42
ACTN4-205ENST00000477174 UBR3Q6ZT12 1888 aa17.65■□□□□ 0.42
ACTN4-205ENST00000477174 CCDC184Q52MB2 194 aa17.65■□□□□ 0.42
ACTN4-205ENST00000477174 RRP7AQ9Y3A4 280 aaKnown RBP17.65■□□□□ 0.42
ACTN4-205ENST00000477174 SOS1Q07889 1333 aaPredicted RBP17.65■□□□□ 0.42
ACTN4-205ENST00000477174 GYS1P13807 737 aa17.64■□□□□ 0.41
ACTN4-205ENST00000477174 NEUROD2Q15784 382 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms