RNA–Protein interactions for RNA: ENST00000476964.5

SOX2-OT-207, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 606 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-207ENST00000476964 SMTNP53814 917 aa9.11□□□□□ -0.95
SOX2-OT-207ENST00000476964 SLC27A3Q5K4L6 730 aa9.11□□□□□ -0.95
SOX2-OT-207ENST00000476964 TREML4Q6UXN2 200 aa9.11□□□□□ -0.95
SOX2-OT-207ENST00000476964 PPARGC1BQ86YN6 1023 aaKnown RBP9.11□□□□□ -0.95
SOX2-OT-207ENST00000476964 SIX5Q8N196 739 aa9.11□□□□□ -0.95
SOX2-OT-207ENST00000476964 C1orf115Q9H7X2 142 aa9.11□□□□□ -0.95
SOX2-OT-207ENST00000476964 DNAAF2Q9NVR5 837 aaKnown RBP9.11□□□□□ -0.95
SOX2-OT-207ENST00000476964 ARID3CA6NKF2 412 aa9.1□□□□□ -0.95
SOX2-OT-207ENST00000476964 PPFIA3O75145 1194 aa9.1□□□□□ -0.95
SOX2-OT-207ENST00000476964 POU4F2Q12837 409 aa9.1□□□□□ -0.95
SOX2-OT-207ENST00000476964 CCDC155Q8N6L0 562 aa9.1□□□□□ -0.95
SOX2-OT-207ENST00000476964 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.1□□□□□ -0.95
SOX2-OT-207ENST00000476964 ZSCAN10Q96SZ4 725 aaPredicted RBP9.1□□□□□ -0.95
SOX2-OT-207ENST00000476964 VRTNQ9H8Y1 702 aa9.1□□□□□ -0.95
SOX2-OT-207ENST00000476964 ZNF358Q9NW07 568 aa9.1□□□□□ -0.95
SOX2-OT-207ENST00000476964 SERPINA10Q9UK55 444 aa9.1□□□□□ -0.95
SOX2-OT-207ENST00000476964 TIMELESSQ9UNS1 1208 aa9.1□□□□□ -0.95
SOX2-OT-207ENST00000476964 PTK7Q13308 1070 aa9.09□□□□□ -0.95
SOX2-OT-207ENST00000476964 CCDC102BQ68D86 513 aa9.09□□□□□ -0.95
SOX2-OT-207ENST00000476964 NBPF10Q6P3W6 841 aaKnown RBP9.09□□□□□ -0.95
SOX2-OT-207ENST00000476964 ZNF295-AS1Q8N0V1 137 aa9.09□□□□□ -0.95
SOX2-OT-207ENST00000476964 NBPF15Q8N660 670 aa9.09□□□□□ -0.95
SOX2-OT-207ENST00000476964 IQSEC3Q9UPP2 1182 aaPredicted RBP9.09□□□□□ -0.95
SOX2-OT-207ENST00000476964 A6NJY4 79 aa9.08□□□□□ -0.96
SOX2-OT-207ENST00000476964 M0R2N6 131 aa9.08□□□□□ -0.96
SOX2-OT-207ENST00000476964 CDK2AP1O14519 115 aa9.08□□□□□ -0.96
SOX2-OT-207ENST00000476964 BACH1O14867 736 aa9.08□□□□□ -0.96
SOX2-OT-207ENST00000476964 RASA1P20936 1047 aa9.08□□□□□ -0.96
SOX2-OT-207ENST00000476964 EPHA4P54764 986 aa9.08□□□□□ -0.96
SOX2-OT-207ENST00000476964 LCE2CQ5TA81 110 aa9.08□□□□□ -0.96
SOX2-OT-207ENST00000476964 TPCN2Q8NHX9 752 aa9.08□□□□□ -0.96
SOX2-OT-207ENST00000476964 FAM196BA6NMK8 535 aa9.07□□□□□ -0.96
SOX2-OT-207ENST00000476964 RHOQP17081 205 aa9.07□□□□□ -0.96
SOX2-OT-207ENST00000476964 FOXK2Q01167 660 aa9.07□□□□□ -0.96
SOX2-OT-207ENST00000476964 PSME1Q06323 249 aa9.07□□□□□ -0.96
SOX2-OT-207ENST00000476964 TLR1Q15399 786 aa9.07□□□□□ -0.96
SOX2-OT-207ENST00000476964 CRTC2Q53ET0 693 aaPredicted RBP9.07□□□□□ -0.96
SOX2-OT-207ENST00000476964 TAS1R3Q7RTX0 852 aa9.07□□□□□ -0.96
SOX2-OT-207ENST00000476964 SERTAD1Q9UHV2 236 aa9.07□□□□□ -0.96
SOX2-OT-207ENST00000476964 WFS1O76024 890 aa9.06□□□□□ -0.96
SOX2-OT-207ENST00000476964 VSIG8P0DPA2 414 aa9.06□□□□□ -0.96
SOX2-OT-207ENST00000476964 LARP1Q6PKG0 1096 aaKnown RBP9.06□□□□□ -0.96
SOX2-OT-207ENST00000476964 RHBDD1Q8TEB9 315 aa9.06□□□□□ -0.96
SOX2-OT-207ENST00000476964 NANOS1Q8WY41 292 aaKnown RBP9.06□□□□□ -0.96
SOX2-OT-207ENST00000476964 SCHIP1Q9P0W5 487 aaPredicted RBP9.06□□□□□ -0.96
SOX2-OT-207ENST00000476964 DYRK1BQ9Y463 629 aa9.06□□□□□ -0.96
SOX2-OT-207ENST00000476964 VEGFBP49765 207 aa9.05□□□□□ -0.96
SOX2-OT-207ENST00000476964 C4orf17Q53FE4 359 aa9.05□□□□□ -0.96
SOX2-OT-207ENST00000476964 TMEM214Q6NUQ4 689 aaKnown RBP9.05□□□□□ -0.96
SOX2-OT-207ENST00000476964 SLC16A10Q8TF71 515 aa9.05□□□□□ -0.96
SOX2-OT-207ENST00000476964 ARXQ96QS3 562 aa9.05□□□□□ -0.96
SOX2-OT-207ENST00000476964 RFX1P22670 979 aa9.04□□□□□ -0.96
SOX2-OT-207ENST00000476964 ITGA6P23229 1130 aa9.04□□□□□ -0.96
SOX2-OT-207ENST00000476964 CCDC97Q96F63 343 aaPredicted RBP9.04□□□□□ -0.96
SOX2-OT-207ENST00000476964 ZNF594Q96JF6 807 aaPredicted RBP9.04□□□□□ -0.96
SOX2-OT-207ENST00000476964 USP3Q9Y6I4 520 aa9.04□□□□□ -0.96
SOX2-OT-207ENST00000476964 USP17L15C9J2P7 530 aa9.03□□□□□ -0.96
SOX2-OT-207ENST00000476964 USP17L10C9JJH3 530 aa9.03□□□□□ -0.96
SOX2-OT-207ENST00000476964 USP17L13C9JLJ4 530 aa9.03□□□□□ -0.96
SOX2-OT-207ENST00000476964 USP17L12C9JPN9 530 aa9.03□□□□□ -0.96
SOX2-OT-207ENST00000476964 USP17L11C9JVI0 530 aa9.03□□□□□ -0.96
SOX2-OT-207ENST00000476964 USP17L21D6R901 530 aa9.03□□□□□ -0.96
SOX2-OT-207ENST00000476964 USP17L18D6R9N7 530 aa9.03□□□□□ -0.96
SOX2-OT-207ENST00000476964 USP17L22D6RA61 530 aa9.03□□□□□ -0.96
SOX2-OT-207ENST00000476964 USP17L17D6RBQ6 530 aa9.03□□□□□ -0.96
SOX2-OT-207ENST00000476964 USP17L19D6RCP7 530 aa9.03□□□□□ -0.96
SOX2-OT-207ENST00000476964 USP17L20D6RJB6 530 aa9.03□□□□□ -0.96
SOX2-OT-207ENST00000476964 SEC13P55735 322 aa9.03□□□□□ -0.96
SOX2-OT-207ENST00000476964 USP17L24Q0WX57 530 aa9.03□□□□□ -0.96
SOX2-OT-207ENST00000476964 GNASQ5JWF2 1037 aa9.03□□□□□ -0.96
SOX2-OT-207ENST00000476964 ANKMY2Q8IV38 441 aa9.03□□□□□ -0.96
SOX2-OT-207ENST00000476964 TNS4Q8IZW8 715 aa9.03□□□□□ -0.96
SOX2-OT-207ENST00000476964 TIMMDC1Q9NPL8 285 aa9.03□□□□□ -0.96
SOX2-OT-207ENST00000476964 ERBB4Q15303 1308 aa9.03□□□□□ -0.96
SOX2-OT-207ENST00000476964 SFI1A8K8P3 1242 aa9.02□□□□□ -0.97
SOX2-OT-207ENST00000476964 CCDC82Q8N4S0 544 aa9.02□□□□□ -0.97
SOX2-OT-207ENST00000476964 NIFKQ9BYG3 293 aaKnown RBP9.02□□□□□ -0.97
SOX2-OT-207ENST00000476964 F11P03951 625 aa9.01□□□□□ -0.97
SOX2-OT-207ENST00000476964 GTF2E1P29083 439 aaPredicted RBP9.01□□□□□ -0.97
SOX2-OT-207ENST00000476964 DPYDQ12882 1025 aa9.01□□□□□ -0.97
SOX2-OT-207ENST00000476964 ELOAQ14241 798 aaKnown RBP9.01□□□□□ -0.97
SOX2-OT-207ENST00000476964 POTEAQ6S8J7 498 aa9.01□□□□□ -0.97
SOX2-OT-207ENST00000476964 IRF7Q92985 503 aa9.01□□□□□ -0.97
SOX2-OT-207ENST00000476964 CUEDC1Q9NWM3 386 aaPredicted RBP9.01□□□□□ -0.97
SOX2-OT-207ENST00000476964 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9□□□□□ -0.97
SOX2-OT-207ENST00000476964 A0A1B0GTH6 734 aa9□□□□□ -0.97
SOX2-OT-207ENST00000476964 PHKA2P46019 1235 aa9□□□□□ -0.97
SOX2-OT-207ENST00000476964 TEAD4Q15561 434 aa9□□□□□ -0.97
SOX2-OT-207ENST00000476964 CDCA8Q53HL2 280 aa9□□□□□ -0.97
SOX2-OT-207ENST00000476964 TSEN2Q8NCE0 465 aaKnown RBP9□□□□□ -0.97
SOX2-OT-207ENST00000476964 GMCL1Q96IK5 515 aa9□□□□□ -0.97
SOX2-OT-207ENST00000476964 ATG7O95352 703 aa8.99□□□□□ -0.97
SOX2-OT-207ENST00000476964 DBN1Q16643 649 aa8.99□□□□□ -0.97
SOX2-OT-207ENST00000476964 TRIM22Q8IYM9 498 aa8.99□□□□□ -0.97
SOX2-OT-207ENST00000476964 PBXIP1Q96AQ6 731 aa8.99□□□□□ -0.97
SOX2-OT-207ENST00000476964 RBM19Q9Y4C8 960 aaKnown RBP8.99□□□□□ -0.97
SOX2-OT-207ENST00000476964 WIPF1O43516 503 aa8.98□□□□□ -0.97
SOX2-OT-207ENST00000476964 C21orf2O43822 256 aa8.98□□□□□ -0.97
SOX2-OT-207ENST00000476964 SLC9A9Q8IVB4 645 aa8.98□□□□□ -0.97
SOX2-OT-207ENST00000476964 GPR161Q8N6U8 529 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms