RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 PDE1AP54750 535 aa25.97■■□□□ 1.75
LIMS2-214ENST00000476932 ABTB2Q8N961 1025 aa25.97■■□□□ 1.75
LIMS2-214ENST00000476932 FAM43AQ8N2R8 423 aa25.97■■□□□ 1.75
LIMS2-214ENST00000476932 SOS1Q07889 1333 aaPredicted RBP25.96■■□□□ 1.75
LIMS2-214ENST00000476932 FKBP5Q13451 457 aaPredicted RBP25.95■■□□□ 1.75
LIMS2-214ENST00000476932 ARXQ96QS3 562 aa25.95■■□□□ 1.75
LIMS2-214ENST00000476932 SSFA2P28290 1259 aa25.95■■□□□ 1.74
LIMS2-214ENST00000476932 EXOC6BQ9Y2D4 811 aa25.95■■□□□ 1.74
LIMS2-214ENST00000476932 RGPD2P0DJD1 1756 aa25.95■■□□□ 1.74
LIMS2-214ENST00000476932 KDM3BQ7LBC6 1761 aa25.95■■□□□ 1.74
LIMS2-214ENST00000476932 CASC1Q6TDU7 716 aa25.94■■□□□ 1.74
LIMS2-214ENST00000476932 NECTIN2Q92692 538 aa25.94■■□□□ 1.74
LIMS2-214ENST00000476932 LTV1Q96GA3 475 aaPredicted RBP25.94■■□□□ 1.74
LIMS2-214ENST00000476932 BABAM1Q9NWV8 329 aa25.94■■□□□ 1.74
LIMS2-214ENST00000476932 CLEC17AQ6ZS10 378 aa25.94■■□□□ 1.74
LIMS2-214ENST00000476932 PNMA6EA0A0J9YXQ4 647 aa25.93■■□□□ 1.74
LIMS2-214ENST00000476932 TAF7Q15545 349 aaPredicted RBP25.93■■□□□ 1.74
LIMS2-214ENST00000476932 PANK2Q9BZ23 570 aa25.93■■□□□ 1.74
LIMS2-214ENST00000476932 GNAI3P08754 354 aa25.93■■□□□ 1.74
LIMS2-214ENST00000476932 USHBP1Q8N6Y0 703 aa25.92■■□□□ 1.74
LIMS2-214ENST00000476932 SETD1BQ9UPS6 1966 aaKnown RBP25.92■■□□□ 1.74
LIMS2-214ENST00000476932 PHRF1Q9P1Y6 1649 aaKnown RBP25.92■■□□□ 1.74
LIMS2-214ENST00000476932 IBTKQ9P2D0 1353 aaPredicted RBP25.92■■□□□ 1.74
LIMS2-214ENST00000476932 CEMIPQ8WUJ3 1361 aa25.91■■□□□ 1.74
LIMS2-214ENST00000476932 ERC2O15083 957 aa25.9■■□□□ 1.74
LIMS2-214ENST00000476932 REC8O95072 547 aa25.9■■□□□ 1.74
LIMS2-214ENST00000476932 ATP8B2P98198 1209 aa25.9■■□□□ 1.74
LIMS2-214ENST00000476932 LMO7Q8WWI1 1683 aa25.89■■□□□ 1.74
LIMS2-214ENST00000476932 TSHZ3Q63HK5 1081 aa25.89■■□□□ 1.74
LIMS2-214ENST00000476932 PHF8Q9UPP1 1060 aa25.89■■□□□ 1.74
LIMS2-214ENST00000476932 LRRCC1Q9C099 1032 aa25.89■■□□□ 1.73
LIMS2-214ENST00000476932 LRRFIP2Q9Y608 721 aaKnown RBP25.88■■□□□ 1.73
LIMS2-214ENST00000476932 MRE11P49959 708 aa25.88■■□□□ 1.73
LIMS2-214ENST00000476932 ZNF142P52746 1687 aaPredicted RBP25.87■■□□□ 1.73
LIMS2-214ENST00000476932 PTMSP20962 102 aa25.87■■□□□ 1.73
LIMS2-214ENST00000476932 USP44Q9H0E7 712 aa25.87■■□□□ 1.73
LIMS2-214ENST00000476932 CYP2E1P05181 493 aaPredicted RBP25.86■■□□□ 1.73
LIMS2-214ENST00000476932 SKOR2Q2VWA4 1001 aaPredicted RBP25.86■■□□□ 1.73
LIMS2-214ENST00000476932 IP6K1Q92551 441 aa25.86■■□□□ 1.73
LIMS2-214ENST00000476932 ISY1Q9ULR0 285 aaKnown RBP25.86■■□□□ 1.73
LIMS2-214ENST00000476932 MX1P20591 662 aa25.85■■□□□ 1.73
LIMS2-214ENST00000476932 BAG4O95429 457 aaKnown RBP25.85■■□□□ 1.73
LIMS2-214ENST00000476932 HDGFL1Q5TGJ6 251 aa25.85■■□□□ 1.73
LIMS2-214ENST00000476932 GRPEL1Q9HAV7 217 aa25.85■■□□□ 1.73
LIMS2-214ENST00000476932 C14orf37Q86TY3 774 aa25.84■■□□□ 1.73
LIMS2-214ENST00000476932 PHAXQ9H814 394 aaKnown RBP25.84■■□□□ 1.73
LIMS2-214ENST00000476932 NBPF6Q5VWK0 638 aa25.84■■□□□ 1.73
LIMS2-214ENST00000476932 NBPF4Q96M43 638 aa25.84■■□□□ 1.73
LIMS2-214ENST00000476932 ST18O60284 1047 aa25.83■■□□□ 1.73
LIMS2-214ENST00000476932 STAP2Q9UGK3 403 aa25.83■■□□□ 1.73
LIMS2-214ENST00000476932 GAS2L3Q86XJ1 694 aa25.83■■□□□ 1.72
LIMS2-214ENST00000476932 RRAGDQ9NQL2 400 aaPredicted RBP25.83■■□□□ 1.72
LIMS2-214ENST00000476932 ADGRL3Q9HAR2 1447 aa25.82■■□□□ 1.72
LIMS2-214ENST00000476932 ESYT1Q9BSJ8 1104 aa25.82■■□□□ 1.72
LIMS2-214ENST00000476932 PKP1Q13835 747 aa25.81■■□□□ 1.72
LIMS2-214ENST00000476932 UBTFL1P0CB47 393 aaPredicted RBP25.8■■□□□ 1.72
LIMS2-214ENST00000476932 SSH3Q8TE77 659 aa25.8■■□□□ 1.72
LIMS2-214ENST00000476932 RBM33Q96EV2 1170 aaKnown RBP25.8■■□□□ 1.72
LIMS2-214ENST00000476932 EIF4A1P60842 406 aaKnown RBP25.8■■□□□ 1.72
LIMS2-214ENST00000476932 NUCB2P80303 420 aa25.8■■□□□ 1.72
LIMS2-214ENST00000476932 ZGPATQ8N5A5 531 aaKnown RBP25.8■■□□□ 1.72
LIMS2-214ENST00000476932 LGR6Q9HBX8 967 aa25.8■■□□□ 1.72
LIMS2-214ENST00000476932 CHMLP26374 656 aa25.78■■□□□ 1.72
LIMS2-214ENST00000476932 CWC22Q9HCG8 908 aaKnown RBP25.77■■□□□ 1.72
LIMS2-214ENST00000476932 AOX1Q06278 1338 aa25.77■■□□□ 1.72
LIMS2-214ENST00000476932 GOLGA6L22H0YM25 854 aa25.77■■□□□ 1.72
LIMS2-214ENST00000476932 UNC5CLQ8IV45 518 aa25.77■■□□□ 1.72
LIMS2-214ENST00000476932 NCAPD2Q15021 1401 aa25.76■■□□□ 1.71
LIMS2-214ENST00000476932 POLA2Q14181 598 aa25.76■■□□□ 1.71
LIMS2-214ENST00000476932 SRCIN1Q9C0H9 1055 aa25.76■■□□□ 1.71
LIMS2-214ENST00000476932 PXDNQ92626 1479 aa25.76■■□□□ 1.71
LIMS2-214ENST00000476932 HOXB7P09629 217 aa25.76■■□□□ 1.71
LIMS2-214ENST00000476932 KLHL40Q2TBA0 621 aa25.76■■□□□ 1.71
LIMS2-214ENST00000476932 CAMTA1Q9Y6Y1 1673 aa25.75■■□□□ 1.71
LIMS2-214ENST00000476932 SLIT3O75094 1523 aa25.75■■□□□ 1.71
LIMS2-214ENST00000476932 KCNQ3O43525 872 aa25.75■■□□□ 1.71
LIMS2-214ENST00000476932 PALD1Q9ULE6 856 aa25.75■■□□□ 1.71
LIMS2-214ENST00000476932 ANKLE2Q86XL3 938 aa25.75■■□□□ 1.71
LIMS2-214ENST00000476932 ANO8Q9HCE9 1232 aaPredicted RBP25.75■■□□□ 1.71
LIMS2-214ENST00000476932 CHPF2Q9P2E5 772 aa25.75■■□□□ 1.71
LIMS2-214ENST00000476932 ZDHHC9Q9Y397 364 aa25.75■■□□□ 1.71
LIMS2-214ENST00000476932 CRYBG1Q9Y4K1 1723 aa25.74■■□□□ 1.71
LIMS2-214ENST00000476932 PPP1R42Q7Z4L9 355 aa25.74■■□□□ 1.71
LIMS2-214ENST00000476932 EIF2S2P20042 333 aaKnown RBP25.74■■□□□ 1.71
LIMS2-214ENST00000476932 LRRC59Q96AG4 307 aaKnown RBP25.74■■□□□ 1.71
LIMS2-214ENST00000476932 SIPA1L3O60292 1781 aaPredicted RBP25.73■■□□□ 1.71
LIMS2-214ENST00000476932 RILPL2Q969X0 211 aa25.73■■□□□ 1.71
LIMS2-214ENST00000476932 IL17RAQ96F46 866 aa25.73■■□□□ 1.71
LIMS2-214ENST00000476932 IL1RAPL2Q9NP60 686 aa25.73■■□□□ 1.71
LIMS2-214ENST00000476932 TRIM6-TRIM34B2RNG4 842 aa25.72■■□□□ 1.71
LIMS2-214ENST00000476932 ESCO1Q5FWF5 840 aa25.72■■□□□ 1.71
LIMS2-214ENST00000476932 KCNH5Q8NCM2 988 aa25.72■■□□□ 1.71
LIMS2-214ENST00000476932 BEND3Q5T5X7 828 aa25.72■■□□□ 1.71
LIMS2-214ENST00000476932 MCTP1Q6DN14 999 aa25.72■■□□□ 1.71
LIMS2-214ENST00000476932 NBPF7P0C2Y1 421 aaPredicted RBP25.71■■□□□ 1.71
LIMS2-214ENST00000476932 NEK4P51957 841 aa25.71■■□□□ 1.71
LIMS2-214ENST00000476932 PSME1Q06323 249 aa25.71■■□□□ 1.71
LIMS2-214ENST00000476932 LMBRD1Q9NUN5 540 aa25.71■■□□□ 1.71
LIMS2-214ENST00000476932 ADCY9O60503 1353 aa25.71■■□□□ 1.71
LIMS2-214ENST00000476932 TRPM3Q9HCF6 1732 aaPredicted RBP25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms