RNA–Protein interactions for RNA: ENST00000476658.5

DFFA-203, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 3

Gene DFFA, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-203ENST00000476658 LOC102724428A0A0B4J2F2 783 aa19.97■□□□□ 0.79
DFFA-203ENST00000476658 SIK1P57059 783 aa19.97■□□□□ 0.79
DFFA-203ENST00000476658 ZNF827Q17R98 1081 aa19.97■□□□□ 0.79
DFFA-203ENST00000476658 PNNQ9H307 717 aaKnown RBP19.97■□□□□ 0.79
DFFA-203ENST00000476658 MRC1P22897 1456 aa19.97■□□□□ 0.79
DFFA-203ENST00000476658 TUBGCP6Q96RT7 1819 aa19.97■□□□□ 0.79
DFFA-203ENST00000476658 ANP32CO43423 234 aa19.96■□□□□ 0.79
DFFA-203ENST00000476658 WDR43Q15061 677 aaKnown RBP eCLIP19.96■□□□□ 0.79
DFFA-203ENST00000476658 RBM42Q9BTD8 480 aaKnown RBP19.96■□□□□ 0.79
DFFA-203ENST00000476658 MAPK8IP3Q9UPT6 1336 aa19.96■□□□□ 0.79
DFFA-203ENST00000476658 CASZ1Q86V15 1759 aa19.95■□□□□ 0.78
DFFA-203ENST00000476658 HMGB2P26583 209 aaKnown RBP19.95■□□□□ 0.78
DFFA-203ENST00000476658 AKT1S1Q96B36 256 aa19.95■□□□□ 0.78
DFFA-203ENST00000476658 QSER1Q2KHR3 1735 aa19.95■□□□□ 0.78
DFFA-203ENST00000476658 ATP6V1AP38606 617 aa19.94■□□□□ 0.78
DFFA-203ENST00000476658 TEFQ10587 303 aa19.94■□□□□ 0.78
DFFA-203ENST00000476658 IL17REQ8NFR9 667 aa19.94■□□□□ 0.78
DFFA-203ENST00000476658 RTF1Q92541 710 aaKnown RBP19.94■□□□□ 0.78
DFFA-203ENST00000476658 TFCP2L1Q9NZI6 479 aa19.94■□□□□ 0.78
DFFA-203ENST00000476658 C4BP0C0L5 1744 aa19.93■□□□□ 0.78
DFFA-203ENST00000476658 SIPA1L3O60292 1781 aaPredicted RBP19.93■□□□□ 0.78
DFFA-203ENST00000476658 PLEKHF1Q96S99 279 aa19.93■□□□□ 0.78
DFFA-203ENST00000476658 PDGFDQ9GZP0 370 aaPredicted RBP19.93■□□□□ 0.78
DFFA-203ENST00000476658 LRP5O75197 1615 aa19.92■□□□□ 0.78
DFFA-203ENST00000476658 PTCD1O75127 700 aaKnown RBP19.92■□□□□ 0.78
DFFA-203ENST00000476658 ZNF831Q5JPB2 1677 aa19.91■□□□□ 0.78
DFFA-203ENST00000476658 ITPK1Q13572 414 aa19.91■□□□□ 0.78
DFFA-203ENST00000476658 SLC39A6Q13433 755 aa19.9■□□□□ 0.78
DFFA-203ENST00000476658 MCM10Q7L590 875 aa19.9■□□□□ 0.78
DFFA-203ENST00000476658 LINC00116Q8NCU8 138 aa19.9■□□□□ 0.78
DFFA-203ENST00000476658 AK7Q96M32 723 aa19.9■□□□□ 0.78
DFFA-203ENST00000476658 COL5A3P25940 1745 aaPredicted RBP19.89■□□□□ 0.77
DFFA-203ENST00000476658 NFE2L2Q16236 605 aa19.89■□□□□ 0.77
DFFA-203ENST00000476658 CCDC146Q8IYE0 955 aa19.89■□□□□ 0.77
DFFA-203ENST00000476658 CEMIPQ8WUJ3 1361 aa19.89■□□□□ 0.77
DFFA-203ENST00000476658 SLC4A9Q96Q91 983 aa19.89■□□□□ 0.77
DFFA-203ENST00000476658 SRCAPQ6ZRS2 3230 aa19.89■□□□□ 0.77
DFFA-203ENST00000476658 UBR3Q6ZT12 1888 aa19.88■□□□□ 0.77
DFFA-203ENST00000476658 PNPLA7Q6ZV29 1317 aa19.88■□□□□ 0.77
DFFA-203ENST00000476658 HTATSF1O43719 755 aaKnown RBP19.88■□□□□ 0.77
DFFA-203ENST00000476658 ZBTB7AO95365 584 aa19.88■□□□□ 0.77
DFFA-203ENST00000476658 DCTN1Q14203 1278 aa19.88■□□□□ 0.77
DFFA-203ENST00000476658 ADAMTS8Q9UP79 889 aa19.88■□□□□ 0.77
DFFA-203ENST00000476658 MSH5O43196 834 aa19.87■□□□□ 0.77
DFFA-203ENST00000476658 TTC5Q8N0Z6 440 aa19.87■□□□□ 0.77
DFFA-203ENST00000476658 SPON1Q9HCB6 807 aa19.87■□□□□ 0.77
DFFA-203ENST00000476658 UBR2Q8IWV8 1755 aa19.87■□□□□ 0.77
DFFA-203ENST00000476658 TJP1Q07157 1748 aa19.87■□□□□ 0.77
DFFA-203ENST00000476658 CCDC184Q52MB2 194 aa19.85■□□□□ 0.77
DFFA-203ENST00000476658 RUNDC1Q96C34 613 aa19.85■□□□□ 0.77
DFFA-203ENST00000476658 ATF5Q9Y2D1 282 aaPredicted RBP19.85■□□□□ 0.77
DFFA-203ENST00000476658 KCPQ6ZWJ8 1503 aa19.85■□□□□ 0.77
DFFA-203ENST00000476658 MYH14Q7Z406 1995 aaKnown RBP19.84■□□□□ 0.77
DFFA-203ENST00000476658 CICQ96RK0 1608 aaPredicted RBP19.84■□□□□ 0.77
DFFA-203ENST00000476658 BTBD11A6QL63 1104 aa19.84■□□□□ 0.77
DFFA-203ENST00000476658 GNPATO15228 680 aa19.84■□□□□ 0.77
DFFA-203ENST00000476658 RIPK4P57078 832 aa19.84■□□□□ 0.77
DFFA-203ENST00000476658 MTFR1LQ9H019 292 aa19.84■□□□□ 0.77
DFFA-203ENST00000476658 PHF14O94880 888 aa19.83■□□□□ 0.77
DFFA-203ENST00000476658 TMPOP42166 694 aaKnown RBP19.83■□□□□ 0.77
DFFA-203ENST00000476658 ZNF790Q6PG37 636 aa19.83■□□□□ 0.77
DFFA-203ENST00000476658 COL23A1Q86Y22 540 aaPredicted RBP19.83■□□□□ 0.77
DFFA-203ENST00000476658 FLAD1Q8NFF5 587 aa19.83■□□□□ 0.77
DFFA-203ENST00000476658 MRS2Q9HD23 443 aa19.83■□□□□ 0.77
DFFA-203ENST00000476658 RRP7AQ9Y3A4 280 aaKnown RBP19.82■□□□□ 0.76
DFFA-203ENST00000476658 CNTNAP4Q9C0A0 1308 aa19.81■□□□□ 0.76
DFFA-203ENST00000476658 NEUROD2Q15784 382 aa19.81■□□□□ 0.76
DFFA-203ENST00000476658 SMIM5Q71RC9 77 aa19.81■□□□□ 0.76
DFFA-203ENST00000476658 DNAJC10Q8IXB1 793 aa19.81■□□□□ 0.76
DFFA-203ENST00000476658 SLC16A10Q8TF71 515 aa19.81■□□□□ 0.76
DFFA-203ENST00000476658 THUMPD2Q9BTF0 503 aaKnown RBP19.81■□□□□ 0.76
DFFA-203ENST00000476658 PPP1R1BQ9UD71 204 aaPredicted RBP19.81■□□□□ 0.76
DFFA-203ENST00000476658 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.8■□□□□ 0.76
DFFA-203ENST00000476658 SSFA2P28290 1259 aa19.8■□□□□ 0.76
DFFA-203ENST00000476658 TAF7Q15545 349 aaPredicted RBP19.8■□□□□ 0.76
DFFA-203ENST00000476658 RC3H1Q5TC82 1133 aaKnown RBP19.8■□□□□ 0.76
DFFA-203ENST00000476658 AMIGO3Q86WK7 504 aa19.8■□□□□ 0.76
DFFA-203ENST00000476658 ZNF496Q96IT1 587 aaPredicted RBP19.8■□□□□ 0.76
DFFA-203ENST00000476658 RTCBQ9Y3I0 505 aaKnown RBP19.8■□□□□ 0.76
DFFA-203ENST00000476658 KCNQ3O43525 872 aa19.79■□□□□ 0.76
DFFA-203ENST00000476658 CRKLP46109 303 aaKnown RBP19.79■□□□□ 0.76
DFFA-203ENST00000476658 LMOD3Q0VAK6 560 aa19.79■□□□□ 0.76
DFFA-203ENST00000476658 VSIG10Q8N0Z9 540 aa19.79■□□□□ 0.76
DFFA-203ENST00000476658 FMNL2Q96PY5 1086 aa19.79■□□□□ 0.76
DFFA-203ENST00000476658 HEG1Q9ULI3 1381 aa19.78■□□□□ 0.76
DFFA-203ENST00000476658 PTGER2P43116 358 aa19.77■□□□□ 0.76
DFFA-203ENST00000476658 MIS18AQ9NYP9 233 aa19.77■□□□□ 0.76
DFFA-203ENST00000476658 KDM3BQ7LBC6 1761 aa19.77■□□□□ 0.76
DFFA-203ENST00000476658 RPS6KA4O75676 772 aa19.76■□□□□ 0.75
DFFA-203ENST00000476658 TRAPPC3LQ5T215 181 aa19.76■□□□□ 0.75
DFFA-203ENST00000476658 PNISRQ8TF01 805 aaKnown RBP19.76■□□□□ 0.75
DFFA-203ENST00000476658 CCDC87Q9NVE4 849 aa19.76■□□□□ 0.75
DFFA-203ENST00000476658 COL24A1Q17RW2 1714 aa19.76■□□□□ 0.75
DFFA-203ENST00000476658 CYP19A1P11511 503 aaPredicted RBP19.75■□□□□ 0.75
DFFA-203ENST00000476658 POLD1P28340 1107 aa19.75■□□□□ 0.75
DFFA-203ENST00000476658 MSL1Q68DK7 614 aa19.75■□□□□ 0.75
DFFA-203ENST00000476658 C4AP0C0L4 1744 aa19.74■□□□□ 0.75
DFFA-203ENST00000476658 APAF1O14727 1248 aa19.74■□□□□ 0.75
DFFA-203ENST00000476658 STARD3NLO95772 234 aa19.74■□□□□ 0.75
DFFA-203ENST00000476658 INTS5Q6P9B9 1019 aaKnown RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms