RNA–Protein interactions for RNA: ENST00000476350.1

MACF1-216, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 5,304 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-216ENST00000476350 CLSTN1O94985 981 aa10.27□□□□□ -0.76
MACF1-216ENST00000476350 ZNF445P59923 1031 aa10.27□□□□□ -0.76
MACF1-216ENST00000476350 RIMS2Q9UQ26 1411 aa10.27□□□□□ -0.76
MACF1-216ENST00000476350 HMMRO75330 724 aa10.27□□□□□ -0.77
MACF1-216ENST00000476350 KRT28Q7Z3Y7 464 aa10.27□□□□□ -0.77
MACF1-216ENST00000476350 POLKQ9UBT6 870 aa10.27□□□□□ -0.77
MACF1-216ENST00000476350 PRPF40AO75400 957 aaKnown RBP10.27□□□□□ -0.77
MACF1-216ENST00000476350 PREX1Q8TCU6 1659 aa10.27□□□□□ -0.77
MACF1-216ENST00000476350 TULP1O00294 542 aaPredicted RBP10.27□□□□□ -0.77
MACF1-216ENST00000476350 C8orf58Q8NAV2 365 aa10.27□□□□□ -0.77
MACF1-216ENST00000476350 LMBRD1Q9NUN5 540 aa10.27□□□□□ -0.77
MACF1-216ENST00000476350 TMEM131LA2VDJ0 1609 aa10.27□□□□□ -0.77
MACF1-216ENST00000476350 ALKQ9UM73 1620 aa10.27□□□□□ -0.77
MACF1-216ENST00000476350 APBB1O00213 710 aa10.26□□□□□ -0.77
MACF1-216ENST00000476350 OFD1O75665 1012 aa10.26□□□□□ -0.77
MACF1-216ENST00000476350 STARD3NLO95772 234 aa10.26□□□□□ -0.77
MACF1-216ENST00000476350 CERKQ8TCT0 537 aa10.26□□□□□ -0.77
MACF1-216ENST00000476350 RBM27Q9P2N5 1060 aaKnown RBP10.26□□□□□ -0.77
MACF1-216ENST00000476350 TRPC5Q9UL62 973 aaPredicted RBP10.26□□□□□ -0.77
MACF1-216ENST00000476350 ATP7BP35670 1465 aa10.26□□□□□ -0.77
MACF1-216ENST00000476350 ARHGEF40Q8TER5 1519 aa10.26□□□□□ -0.77
MACF1-216ENST00000476350 DCTPP1Q9H773 170 aa10.26□□□□□ -0.77
MACF1-216ENST00000476350 DIP2CQ9Y2E4 1556 aa10.26□□□□□ -0.77
MACF1-216ENST00000476350 ZNF853P0CG23 659 aa10.26□□□□□ -0.77
MACF1-216ENST00000476350 IDI1Q13907 227 aa10.26□□□□□ -0.77
MACF1-216ENST00000476350 ZMYND15Q9H091 742 aa10.26□□□□□ -0.77
MACF1-216ENST00000476350 RBSNQ9H1K0 784 aa10.26□□□□□ -0.77
MACF1-216ENST00000476350 EMILIN1Q9Y6C2 1016 aa10.26□□□□□ -0.77
MACF1-216ENST00000476350 SMARCA5O60264 1052 aaPredicted RBP10.25□□□□□ -0.77
MACF1-216ENST00000476350 GPR162Q16538 588 aa10.25□□□□□ -0.77
MACF1-216ENST00000476350 IL13P35225 146 aa10.25□□□□□ -0.77
MACF1-216ENST00000476350 PKP1Q13835 747 aa10.25□□□□□ -0.77
MACF1-216ENST00000476350 R3HCC1Q9Y3T6 440 aaKnown RBP10.25□□□□□ -0.77
MACF1-216ENST00000476350 NF2P35240 595 aa10.25□□□□□ -0.77
MACF1-216ENST00000476350 FOXD4L5Q5VV16 416 aaPredicted RBP10.25□□□□□ -0.77
MACF1-216ENST00000476350 FOXD4L4Q8WXT5 416 aaPredicted RBP10.25□□□□□ -0.77
MACF1-216ENST00000476350 CDK12Q9NYV4 1490 aaPredicted RBP10.24□□□□□ -0.77
MACF1-216ENST00000476350 FAM83GA6ND36 823 aa10.24□□□□□ -0.77
MACF1-216ENST00000476350 GPT2Q8TD30 523 aa10.24□□□□□ -0.77
MACF1-216ENST00000476350 OTUD7AQ8TE49 926 aaPredicted RBP10.24□□□□□ -0.77
MACF1-216ENST00000476350 PDCL3Q9H2J4 239 aa10.24□□□□□ -0.77
MACF1-216ENST00000476350 MAP2P11137 1827 aaKnown RBP10.24□□□□□ -0.77
MACF1-216ENST00000476350 NCKAP5LQ9HCH0 1330 aa10.24□□□□□ -0.77
MACF1-216ENST00000476350 SDSP20132 328 aa10.24□□□□□ -0.77
MACF1-216ENST00000476350 HS1BP3Q53T59 392 aa10.24□□□□□ -0.77
MACF1-216ENST00000476350 ZGPATQ8N5A5 531 aaKnown RBP10.24□□□□□ -0.77
MACF1-216ENST00000476350 RBM10P98175 930 aaKnown RBP10.24□□□□□ -0.77
MACF1-216ENST00000476350 NUTM2GQ5VZR2 741 aa10.24□□□□□ -0.77
MACF1-216ENST00000476350 CCDC39Q9UFE4 941 aa10.24□□□□□ -0.77
MACF1-216ENST00000476350 REC8O95072 547 aa10.23□□□□□ -0.77
MACF1-216ENST00000476350 PRIM1P49642 420 aaKnown RBP10.23□□□□□ -0.77
MACF1-216ENST00000476350 CLEC11AQ9Y240 323 aa10.23□□□□□ -0.77
MACF1-216ENST00000476350 CYP2E1P05181 493 aaPredicted RBP10.23□□□□□ -0.77
MACF1-216ENST00000476350 TMOD3Q9NYL9 352 aa10.23□□□□□ -0.77
MACF1-216ENST00000476350 NOL7Q9UMY1 257 aaKnown RBP10.23□□□□□ -0.77
MACF1-216ENST00000476350 AK9Q5TCS8 1911 aa10.23□□□□□ -0.77
MACF1-216ENST00000476350 DLG5Q8TDM6 1919 aa10.23□□□□□ -0.77
MACF1-216ENST00000476350 CHMP4CQ96CF2 233 aa10.23□□□□□ -0.77
MACF1-216ENST00000476350 GNL3LQ9NVN8 582 aaKnown RBP10.23□□□□□ -0.77
MACF1-216ENST00000476350 CEP85Q6P2H3 762 aa10.23□□□□□ -0.77
MACF1-216ENST00000476350 TTLL12Q14166 644 aaPredicted RBP10.22□□□□□ -0.77
MACF1-216ENST00000476350 DCTN1Q14203 1278 aa10.22□□□□□ -0.77
MACF1-216ENST00000476350 LRSAM1Q6UWE0 723 aa10.22□□□□□ -0.77
MACF1-216ENST00000476350 CCDC61Q9Y6R9 512 aa10.22□□□□□ -0.77
MACF1-216ENST00000476350 YEATS2Q9ULM3 1422 aa10.22□□□□□ -0.77
MACF1-216ENST00000476350 SYCE3A1L190 88 aa10.22□□□□□ -0.77
MACF1-216ENST00000476350 ERC2O15083 957 aa10.22□□□□□ -0.77
MACF1-216ENST00000476350 KCNA6P17658 529 aa10.22□□□□□ -0.77
MACF1-216ENST00000476350 LMOD1P29536 600 aaPredicted RBP10.22□□□□□ -0.77
MACF1-216ENST00000476350 ANKRD44Q8N8A2 993 aa10.22□□□□□ -0.77
MACF1-216ENST00000476350 FLAD1Q8NFF5 587 aa10.22□□□□□ -0.77
MACF1-216ENST00000476350 CNKSR2Q8WXI2 1034 aa10.22□□□□□ -0.77
MACF1-216ENST00000476350 ARHGEF6Q15052 776 aa10.22□□□□□ -0.77
MACF1-216ENST00000476350 TEX13AQ9BXU3 409 aaPredicted RBP10.22□□□□□ -0.77
MACF1-216ENST00000476350 RIMBP3CA6NJZ7 1639 aa10.22□□□□□ -0.77
MACF1-216ENST00000476350 RIMBP3BA6NNM3 1639 aa10.22□□□□□ -0.77
MACF1-216ENST00000476350 RIMBP3Q9UFD9 1639 aa10.22□□□□□ -0.77
MACF1-216ENST00000476350 UQCRHLA0A096LP55 91 aa10.22□□□□□ -0.77
MACF1-216ENST00000476350 UQCRHP07919 91 aa10.22□□□□□ -0.77
MACF1-216ENST00000476350 XPCQ01831 940 aaPredicted RBP10.22□□□□□ -0.77
MACF1-216ENST00000476350 CSPP1Q1MSJ5 1256 aa10.22□□□□□ -0.77
MACF1-216ENST00000476350 RPAP2Q8IXW5 612 aaPredicted RBP10.22□□□□□ -0.77
MACF1-216ENST00000476350 ZC3H6P61129 1189 aaKnown RBP10.21□□□□□ -0.77
MACF1-216ENST00000476350 NME9Q86XW9 330 aa10.21□□□□□ -0.77
MACF1-216ENST00000476350 USP21Q9UK80 565 aa10.21□□□□□ -0.77
MACF1-216ENST00000476350 EDC4Q6P2E9 1401 aaKnown RBP10.21□□□□□ -0.77
MACF1-216ENST00000476350 RRS1Q15050 365 aaKnown RBP10.21□□□□□ -0.78
MACF1-216ENST00000476350 DDB1Q16531 1140 aa10.21□□□□□ -0.78
MACF1-216ENST00000476350 DLC1Q96QB1 1528 aa10.21□□□□□ -0.78
MACF1-216ENST00000476350 FOXO3O43524 673 aa10.21□□□□□ -0.78
MACF1-216ENST00000476350 MCCP23508 829 aa10.21□□□□□ -0.78
MACF1-216ENST00000476350 CPSF1Q10570 1443 aaKnown RBP10.21□□□□□ -0.78
MACF1-216ENST00000476350 TERF1P54274 439 aa10.2□□□□□ -0.78
MACF1-216ENST00000476350 ZNF500O60304 480 aaPredicted RBP10.2□□□□□ -0.78
MACF1-216ENST00000476350 WAPLQ7Z5K2 1190 aa10.2□□□□□ -0.78
MACF1-216ENST00000476350 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.2□□□□□ -0.78
MACF1-216ENST00000476350 ATP10DQ9P241 1426 aa10.2□□□□□ -0.78
MACF1-216ENST00000476350 PTMAP06454 111 aaKnown RBP10.2□□□□□ -0.78
MACF1-216ENST00000476350 ZNF710Q8N1W2 664 aa10.2□□□□□ -0.78
MACF1-216ENST00000476350 TSPY26PQ9H489 355 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms