RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 SMARCA5O60264 1052 aaPredicted RBP19.83■□□□□ 0.77
VARS2-207ENST00000476162 SPRYD3Q8NCJ5 442 aa19.83■□□□□ 0.77
VARS2-207ENST00000476162 OTUD7AQ8TE49 926 aaPredicted RBP19.83■□□□□ 0.77
VARS2-207ENST00000476162 HMMRO75330 724 aa19.82■□□□□ 0.76
VARS2-207ENST00000476162 CDC45O75419 566 aa19.82■□□□□ 0.76
VARS2-207ENST00000476162 GNAI2P04899 355 aa19.82■□□□□ 0.76
VARS2-207ENST00000476162 TTC22Q5TAA0 569 aa19.82■□□□□ 0.76
VARS2-207ENST00000476162 HDGFL1Q5TGJ6 251 aa19.82■□□□□ 0.76
VARS2-207ENST00000476162 KRT28Q7Z3Y7 464 aa19.82■□□□□ 0.76
VARS2-207ENST00000476162 FAM208AQ9UK61 1670 aaKnown RBP19.81■□□□□ 0.76
VARS2-207ENST00000476162 PHRF1Q9P1Y6 1649 aaKnown RBP19.8■□□□□ 0.76
VARS2-207ENST00000476162 RGPD2P0DJD1 1756 aa19.8■□□□□ 0.76
VARS2-207ENST00000476162 ZNF530Q6P9A1 599 aaPredicted RBP19.8■□□□□ 0.76
VARS2-207ENST00000476162 C19orf44Q9H6X5 657 aa19.8■□□□□ 0.76
VARS2-207ENST00000476162 PLEKHO1Q53GL0 409 aaPredicted RBP19.79■□□□□ 0.76
VARS2-207ENST00000476162 AKAP4Q5JQC9 854 aa19.79■□□□□ 0.76
VARS2-207ENST00000476162 ANKRD24Q8TF21 1146 aa19.79■□□□□ 0.76
VARS2-207ENST00000476162 SLIT3O75094 1523 aa19.79■□□□□ 0.76
VARS2-207ENST00000476162 EIF4A1P60842 406 aaKnown RBP19.79■□□□□ 0.76
VARS2-207ENST00000476162 HSCBQ8IWL3 235 aa19.79■□□□□ 0.76
VARS2-207ENST00000476162 GNAI3P08754 354 aa19.78■□□□□ 0.76
VARS2-207ENST00000476162 MPRIPQ6WCQ1 1025 aa19.78■□□□□ 0.76
VARS2-207ENST00000476162 KIF2CQ99661 725 aa19.78■□□□□ 0.76
VARS2-207ENST00000476162 PHAXQ9H814 394 aaKnown RBP19.78■□□□□ 0.76
VARS2-207ENST00000476162 AXIN2Q9Y2T1 843 aa19.78■□□□□ 0.76
VARS2-207ENST00000476162 C1orf167Q5SNV9 1468 aa19.78■□□□□ 0.76
VARS2-207ENST00000476162 KCNQ3O43525 872 aa19.78■□□□□ 0.76
VARS2-207ENST00000476162 EIF2S2P20042 333 aaKnown RBP19.78■□□□□ 0.76
VARS2-207ENST00000476162 TEFQ10587 303 aa19.77■□□□□ 0.76
VARS2-207ENST00000476162 AMOTQ4VCS5 1084 aa19.77■□□□□ 0.76
VARS2-207ENST00000476162 RRAGDQ9NQL2 400 aaPredicted RBP19.76■□□□□ 0.75
VARS2-207ENST00000476162 MED1Q15648 1581 aaPredicted RBP19.76■□□□□ 0.75
VARS2-207ENST00000476162 SNX21Q969T3 373 aa19.76■□□□□ 0.75
VARS2-207ENST00000476162 CACNA1FO60840 1977 aa19.75■□□□□ 0.75
VARS2-207ENST00000476162 BTBD11A6QL63 1104 aa19.75■□□□□ 0.75
VARS2-207ENST00000476162 EXOC6BQ9Y2D4 811 aa19.75■□□□□ 0.75
VARS2-207ENST00000476162 PNMA6EA0A0J9YXQ4 647 aa19.75■□□□□ 0.75
VARS2-207ENST00000476162 SDSP20132 328 aa19.75■□□□□ 0.75
VARS2-207ENST00000476162 USP44Q9H0E7 712 aa19.75■□□□□ 0.75
VARS2-207ENST00000476162 TRPM3Q9HCF6 1732 aaPredicted RBP19.74■□□□□ 0.75
VARS2-207ENST00000476162 C1orf141Q5JVX7 400 aa19.74■□□□□ 0.75
VARS2-207ENST00000476162 NCAPD2Q15021 1401 aa19.74■□□□□ 0.75
VARS2-207ENST00000476162 ATP8B2P98198 1209 aa19.74■□□□□ 0.75
VARS2-207ENST00000476162 LRRFIP2Q9Y608 721 aaKnown RBP19.74■□□□□ 0.75
VARS2-207ENST00000476162 RNMTO43148 476 aaKnown RBP19.73■□□□□ 0.75
VARS2-207ENST00000476162 HOXB7P09629 217 aa19.73■□□□□ 0.75
VARS2-207ENST00000476162 ZC3H6P61129 1189 aaKnown RBP19.73■□□□□ 0.75
VARS2-207ENST00000476162 CHPF2Q9P2E5 772 aa19.73■□□□□ 0.75
VARS2-207ENST00000476162 PXDNQ92626 1479 aa19.73■□□□□ 0.75
VARS2-207ENST00000476162 LMO7Q8WWI1 1683 aa19.72■□□□□ 0.75
VARS2-207ENST00000476162 PXDNLA1KZ92 1463 aa19.72■□□□□ 0.75
VARS2-207ENST00000476162 ATF3P18847 181 aa19.71■□□□□ 0.75
VARS2-207ENST00000476162 CHMP5Q9NZZ3 219 aa19.71■□□□□ 0.75
VARS2-207ENST00000476162 UBTFL1P0CB47 393 aaPredicted RBP19.71■□□□□ 0.75
VARS2-207ENST00000476162 PDE1AP54750 535 aa19.71■□□□□ 0.75
VARS2-207ENST00000476162 DDX17Q92841 729 aaKnown RBP19.71■□□□□ 0.75
VARS2-207ENST00000476162 RBM42Q9BTD8 480 aaKnown RBP19.71■□□□□ 0.75
VARS2-207ENST00000476162 LRRCC1Q9C099 1032 aa19.7■□□□□ 0.74
VARS2-207ENST00000476162 OSBPL3Q9H4L5 887 aa19.7■□□□□ 0.74
VARS2-207ENST00000476162 KDM3BQ7LBC6 1761 aa19.7■□□□□ 0.74
VARS2-207ENST00000476162 KIF1AQ12756 1690 aa19.7■□□□□ 0.74
VARS2-207ENST00000476162 TMEM94Q12767 1356 aa19.7■□□□□ 0.74
VARS2-207ENST00000476162 RRP9O43818 475 aaKnown RBP19.7■□□□□ 0.74
VARS2-207ENST00000476162 ERBB3P21860 1342 aa19.69■□□□□ 0.74
VARS2-207ENST00000476162 CD2BP2O95400 341 aaKnown RBP19.69■□□□□ 0.74
VARS2-207ENST00000476162 ANXA1P04083 346 aa19.69■□□□□ 0.74
VARS2-207ENST00000476162 CHMP4AQ9BY43 222 aa19.69■□□□□ 0.74
VARS2-207ENST00000476162 SRCIN1Q9C0H9 1055 aa19.69■□□□□ 0.74
VARS2-207ENST00000476162 PODXL2Q9NZ53 605 aa19.69■□□□□ 0.74
VARS2-207ENST00000476162 PI4KAP2A4QPH2 592 aa19.68■□□□□ 0.74
VARS2-207ENST00000476162 PI4KAP1Q8N8J0 262 aa19.68■□□□□ 0.74
VARS2-207ENST00000476162 MST1RQ04912 1400 aa19.68■□□□□ 0.74
VARS2-207ENST00000476162 HSP90AA2PQ14568 343 aaPredicted RBP19.68■□□□□ 0.74
VARS2-207ENST00000476162 NCOA3Q9Y6Q9 1424 aa19.68■□□□□ 0.74
VARS2-207ENST00000476162 IBTKQ9P2D0 1353 aaPredicted RBP19.68■□□□□ 0.74
VARS2-207ENST00000476162 HSP90AB1P08238 724 aaKnown RBP19.67■□□□□ 0.74
VARS2-207ENST00000476162 CASC1Q6TDU7 716 aa19.67■□□□□ 0.74
VARS2-207ENST00000476162 USP26Q9BXU7 913 aa19.67■□□□□ 0.74
VARS2-207ENST00000476162 TSHZ3Q63HK5 1081 aa19.67■□□□□ 0.74
VARS2-207ENST00000476162 DNAAF4Q8WXU2 420 aa19.67■□□□□ 0.74
VARS2-207ENST00000476162 SALL3Q9BXA9 1300 aa19.66■□□□□ 0.74
VARS2-207ENST00000476162 N4BP2Q86UW6 1770 aaPredicted RBP19.66■□□□□ 0.74
VARS2-207ENST00000476162 GIGYF1O75420 1035 aaPredicted RBP19.66■□□□□ 0.74
VARS2-207ENST00000476162 BEND3Q5T5X7 828 aa19.66■□□□□ 0.74
VARS2-207ENST00000476162 OVOS2A0A0G2JMS6 1433 aa19.65■□□□□ 0.74
VARS2-207ENST00000476162 DDIT3P35638 169 aa19.65■□□□□ 0.74
VARS2-207ENST00000476162 SSH3Q8TE77 659 aa19.65■□□□□ 0.74
VARS2-207ENST00000476162 DBF4Q9UBU7 674 aaPredicted RBP19.65■□□□□ 0.74
VARS2-207ENST00000476162 ALS2Q96Q42 1657 aa19.65■□□□□ 0.74
VARS2-207ENST00000476162 CAMTA1Q9Y6Y1 1673 aa19.65■□□□□ 0.74
VARS2-207ENST00000476162 NBPF7P0C2Y1 421 aaPredicted RBP19.64■□□□□ 0.74
VARS2-207ENST00000476162 RGPD5Q99666 1765 aa19.64■□□□□ 0.73
VARS2-207ENST00000476162 K7ELQ4 463 aaPredicted RBP19.64■□□□□ 0.73
VARS2-207ENST00000476162 MX1P20591 662 aa19.64■□□□□ 0.73
VARS2-207ENST00000476162 PPP1R42Q7Z4L9 355 aa19.64■□□□□ 0.73
VARS2-207ENST00000476162 NLRP2Q9NX02 1062 aa19.64■□□□□ 0.73
VARS2-207ENST00000476162 PRAMEF22A3QJZ6 481 aa19.63■□□□□ 0.73
VARS2-207ENST00000476162 ADCY9O60503 1353 aa19.63■□□□□ 0.73
VARS2-207ENST00000476162 CABLES1Q8TDN4 633 aa19.63■□□□□ 0.73
VARS2-207ENST00000476162 RAPGEF4Q8WZA2 1011 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms