RNA–Protein interactions for RNA: ENST00000476034.5

PDE6B-209, Transcript of phosphodiesterase 6B, humanhuman

TSL 1 (best)

Gene PDE6B, Length 1,012 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-209ENST00000476034 GNAT3A8MTJ3 354 aa25.64■■□□□ 1.7
PDE6B-209ENST00000476034 NFATC2IPQ8NCF5 419 aa25.64■■□□□ 1.7
PDE6B-209ENST00000476034 LGR6Q9HBX8 967 aa25.64■■□□□ 1.7
PDE6B-209ENST00000476034 TUBGCP6Q96RT7 1819 aa25.64■■□□□ 1.7
PDE6B-209ENST00000476034 ZNF827Q17R98 1081 aa25.63■■□□□ 1.69
PDE6B-209ENST00000476034 AKT1S1Q96B36 256 aa25.63■■□□□ 1.69
PDE6B-209ENST00000476034 SLC52A2Q9HAB3 445 aa25.63■■□□□ 1.69
PDE6B-209ENST00000476034 LOC102724428A0A0B4J2F2 783 aa25.62■■□□□ 1.69
PDE6B-209ENST00000476034 NEFMP07197 916 aa25.62■■□□□ 1.69
PDE6B-209ENST00000476034 SIK1P57059 783 aa25.62■■□□□ 1.69
PDE6B-209ENST00000476034 PNNQ9H307 717 aaKnown RBP25.62■■□□□ 1.69
PDE6B-209ENST00000476034 C4BP0C0L5 1744 aa25.62■■□□□ 1.69
PDE6B-209ENST00000476034 SIPA1L3O60292 1781 aaPredicted RBP25.61■■□□□ 1.69
PDE6B-209ENST00000476034 CICQ96RK0 1608 aaPredicted RBP25.59■■□□□ 1.69
PDE6B-209ENST00000476034 DLG5Q8TDM6 1919 aa25.59■■□□□ 1.69
PDE6B-209ENST00000476034 PLEKHF1Q96S99 279 aa25.58■■□□□ 1.69
PDE6B-209ENST00000476034 COL5A3P25940 1745 aaPredicted RBP25.57■■□□□ 1.68
PDE6B-209ENST00000476034 CEMIPQ8WUJ3 1361 aa25.56■■□□□ 1.68
PDE6B-209ENST00000476034 ATP6V1AP38606 617 aa25.56■■□□□ 1.68
PDE6B-209ENST00000476034 IL17REQ8NFR9 667 aa25.56■■□□□ 1.68
PDE6B-209ENST00000476034 TFCP2L1Q9NZI6 479 aa25.56■■□□□ 1.68
PDE6B-209ENST00000476034 MAPK8IP3Q9UPT6 1336 aa25.56■■□□□ 1.68
PDE6B-209ENST00000476034 UBR2Q8IWV8 1755 aa25.56■■□□□ 1.68
PDE6B-209ENST00000476034 TEFQ10587 303 aa25.55■■□□□ 1.68
PDE6B-209ENST00000476034 WDR43Q15061 677 aaKnown RBP eCLIP25.55■■□□□ 1.68
PDE6B-209ENST00000476034 RBM42Q9BTD8 480 aaKnown RBP25.55■■□□□ 1.68
PDE6B-209ENST00000476034 PDGFDQ9GZP0 370 aaPredicted RBP25.55■■□□□ 1.68
PDE6B-209ENST00000476034 RTF1Q92541 710 aaKnown RBP25.54■■□□□ 1.68
PDE6B-209ENST00000476034 TJP1Q07157 1748 aa25.54■■□□□ 1.68
PDE6B-209ENST00000476034 SRCAPQ6ZRS2 3230 aa25.54■■□□□ 1.68
PDE6B-209ENST00000476034 UBR3Q6ZT12 1888 aa25.53■■□□□ 1.68
PDE6B-209ENST00000476034 ANP32CO43423 234 aa25.53■■□□□ 1.68
PDE6B-209ENST00000476034 HTATSF1O43719 755 aaKnown RBP25.53■■□□□ 1.68
PDE6B-209ENST00000476034 ITPK1Q13572 414 aa25.53■■□□□ 1.68
PDE6B-209ENST00000476034 KCPQ6ZWJ8 1503 aa25.53■■□□□ 1.68
PDE6B-209ENST00000476034 LINC00116Q8NCU8 138 aa25.52■■□□□ 1.68
PDE6B-209ENST00000476034 SLC4A9Q96Q91 983 aa25.52■■□□□ 1.68
PDE6B-209ENST00000476034 PNPLA7Q6ZV29 1317 aa25.52■■□□□ 1.68
PDE6B-209ENST00000476034 PTCD1O75127 700 aaKnown RBP25.51■■□□□ 1.67
PDE6B-209ENST00000476034 AK7Q96M32 723 aa25.51■■□□□ 1.67
PDE6B-209ENST00000476034 SPON1Q9HCB6 807 aa25.51■■□□□ 1.67
PDE6B-209ENST00000476034 NFE2L2Q16236 605 aa25.5■■□□□ 1.67
PDE6B-209ENST00000476034 SLC39A6Q13433 755 aa25.49■■□□□ 1.67
PDE6B-209ENST00000476034 ZBTB7AO95365 584 aa25.48■■□□□ 1.67
PDE6B-209ENST00000476034 MCM10Q7L590 875 aa25.48■■□□□ 1.67
PDE6B-209ENST00000476034 MTFR1LQ9H019 292 aa25.48■■□□□ 1.67
PDE6B-209ENST00000476034 TTC5Q8N0Z6 440 aa25.47■■□□□ 1.67
PDE6B-209ENST00000476034 FLAD1Q8NFF5 587 aa25.47■■□□□ 1.67
PDE6B-209ENST00000476034 SLC16A10Q8TF71 515 aa25.47■■□□□ 1.67
PDE6B-209ENST00000476034 COL24A1Q17RW2 1714 aa25.46■■□□□ 1.67
PDE6B-209ENST00000476034 ADAMTS8Q9UP79 889 aa25.46■■□□□ 1.67
PDE6B-209ENST00000476034 CNTNAP4Q9C0A0 1308 aa25.45■■□□□ 1.66
PDE6B-209ENST00000476034 DCTN1Q14203 1278 aa25.45■■□□□ 1.66
PDE6B-209ENST00000476034 ZNF790Q6PG37 636 aa25.44■■□□□ 1.66
PDE6B-209ENST00000476034 COL23A1Q86Y22 540 aaPredicted RBP25.44■■□□□ 1.66
PDE6B-209ENST00000476034 RUNDC1Q96C34 613 aa25.44■■□□□ 1.66
PDE6B-209ENST00000476034 GNPATO15228 680 aa25.43■■□□□ 1.66
PDE6B-209ENST00000476034 RC3H1Q5TC82 1133 aaKnown RBP25.43■■□□□ 1.66
PDE6B-209ENST00000476034 CCDC146Q8IYE0 955 aa25.43■■□□□ 1.66
PDE6B-209ENST00000476034 MYH14Q7Z406 1995 aaKnown RBP25.42■■□□□ 1.66
PDE6B-209ENST00000476034 BTBD11A6QL63 1104 aa25.42■■□□□ 1.66
PDE6B-209ENST00000476034 MSH5O43196 834 aa25.42■■□□□ 1.66
PDE6B-209ENST00000476034 SSFA2P28290 1259 aa25.42■■□□□ 1.66
PDE6B-209ENST00000476034 VSIG10Q8N0Z9 540 aa25.42■■□□□ 1.66
PDE6B-209ENST00000476034 ATF5Q9Y2D1 282 aaPredicted RBP25.42■■□□□ 1.66
PDE6B-209ENST00000476034 AMIGO3Q86WK7 504 aa25.41■■□□□ 1.66
PDE6B-209ENST00000476034 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.4■■□□□ 1.66
PDE6B-209ENST00000476034 PHF14O94880 888 aa25.4■■□□□ 1.66
PDE6B-209ENST00000476034 TMPOP42166 694 aaKnown RBP25.4■■□□□ 1.66
PDE6B-209ENST00000476034 RIPK4P57078 832 aa25.4■■□□□ 1.66
PDE6B-209ENST00000476034 CCDC184Q52MB2 194 aa25.4■■□□□ 1.66
PDE6B-209ENST00000476034 KDM3BQ7LBC6 1761 aa25.4■■□□□ 1.66
PDE6B-209ENST00000476034 PTGER2P43116 358 aa25.39■■□□□ 1.66
PDE6B-209ENST00000476034 LMOD3Q0VAK6 560 aa25.39■■□□□ 1.66
PDE6B-209ENST00000476034 DNAJC10Q8IXB1 793 aa25.39■■□□□ 1.66
PDE6B-209ENST00000476034 ZNF496Q96IT1 587 aaPredicted RBP25.39■■□□□ 1.66
PDE6B-209ENST00000476034 RTCBQ9Y3I0 505 aaKnown RBP25.39■■□□□ 1.66
PDE6B-209ENST00000476034 HEG1Q9ULI3 1381 aa25.39■■□□□ 1.65
PDE6B-209ENST00000476034 CRKLP46109 303 aaKnown RBP25.38■■□□□ 1.65
PDE6B-209ENST00000476034 TAF7Q15545 349 aaPredicted RBP25.38■■□□□ 1.65
PDE6B-209ENST00000476034 PPP1R1BQ9UD71 204 aaPredicted RBP25.38■■□□□ 1.65
PDE6B-209ENST00000476034 C4AP0C0L4 1744 aa25.37■■□□□ 1.65
PDE6B-209ENST00000476034 FMNL2Q96PY5 1086 aa25.37■■□□□ 1.65
PDE6B-209ENST00000476034 SGIP1Q9BQI5 828 aa25.37■■□□□ 1.65
PDE6B-209ENST00000476034 MRS2Q9HD23 443 aa25.37■■□□□ 1.65
PDE6B-209ENST00000476034 RPS6KA4O75676 772 aa25.36■■□□□ 1.65
PDE6B-209ENST00000476034 ADRA2BP18089 450 aa25.36■■□□□ 1.65
PDE6B-209ENST00000476034 CYP19A1P11511 503 aaPredicted RBP25.35■■□□□ 1.65
PDE6B-209ENST00000476034 SMIM5Q71RC9 77 aa25.35■■□□□ 1.65
PDE6B-209ENST00000476034 PNISRQ8TF01 805 aaKnown RBP25.35■■□□□ 1.65
PDE6B-209ENST00000476034 THUMPD2Q9BTF0 503 aaKnown RBP25.35■■□□□ 1.65
PDE6B-209ENST00000476034 KCNQ3O43525 872 aa25.34■■□□□ 1.65
PDE6B-209ENST00000476034 TEX13AQ9BXU3 409 aaPredicted RBP25.34■■□□□ 1.65
PDE6B-209ENST00000476034 CCDC87Q9NVE4 849 aa25.34■■□□□ 1.65
PDE6B-209ENST00000476034 RRP7AQ9Y3A4 280 aaKnown RBP25.34■■□□□ 1.65
PDE6B-209ENST00000476034 POLD1P28340 1107 aa25.33■■□□□ 1.65
PDE6B-209ENST00000476034 NEUROD2Q15784 382 aa25.33■■□□□ 1.65
PDE6B-209ENST00000476034 TRAPPC3LQ5T215 181 aa25.33■■□□□ 1.65
PDE6B-209ENST00000476034 INTS5Q6P9B9 1019 aaKnown RBP25.33■■□□□ 1.65
PDE6B-209ENST00000476034 STARD3NLO95772 234 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms