RNA–Protein interactions for RNA: ENST00000475996.1

HLA-F-224, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-224ENST00000475996 NFATC2IPQ8NCF5 419 aa16.69■□□□□ 0.26
HLA-F-224ENST00000475996 SYTL4Q96C24 671 aaPredicted RBP16.69■□□□□ 0.26
HLA-F-224ENST00000475996 MRC1P22897 1456 aa16.69■□□□□ 0.26
HLA-F-224ENST00000475996 IL16Q14005 1332 aa16.69■□□□□ 0.26
HLA-F-224ENST00000475996 PRIM1P49642 420 aaKnown RBP16.68■□□□□ 0.26
HLA-F-224ENST00000475996 SLFN5Q08AF3 891 aa16.68■□□□□ 0.26
HLA-F-224ENST00000475996 TSR2Q969E8 191 aaKnown RBP16.68■□□□□ 0.26
HLA-F-224ENST00000475996 IFT57Q9NWB7 429 aa16.68■□□□□ 0.26
HLA-F-224ENST00000475996 E9PSI1 815 aa16.67■□□□□ 0.26
HLA-F-224ENST00000475996 ZNF853P0CG23 659 aa16.67■□□□□ 0.26
HLA-F-224ENST00000475996 GNAI1P63096 354 aa16.67■□□□□ 0.26
HLA-F-224ENST00000475996 CFAP44Q96MT7 982 aa16.67■□□□□ 0.26
HLA-F-224ENST00000475996 TSPYL4Q9UJ04 414 aa16.67■□□□□ 0.26
HLA-F-224ENST00000475996 EP400Q96L91 3159 aa16.66■□□□□ 0.26
HLA-F-224ENST00000475996 BTBD11A6QL63 1104 aa16.66■□□□□ 0.26
HLA-F-224ENST00000475996 MBIPQ9NS73 344 aa16.66■□□□□ 0.26
HLA-F-224ENST00000475996 TMOD3Q9NYL9 352 aa16.66■□□□□ 0.26
HLA-F-224ENST00000475996 CHL1O00533 1208 aa16.65■□□□□ 0.26
HLA-F-224ENST00000475996 KCNQ2O43526 872 aa16.65■□□□□ 0.26
HLA-F-224ENST00000475996 SLC39A6Q13433 755 aa16.65■□□□□ 0.26
HLA-F-224ENST00000475996 PIGBQ92521 554 aa16.65■□□□□ 0.26
HLA-F-224ENST00000475996 SBF2Q86WG5 1849 aa16.65■□□□□ 0.26
HLA-F-224ENST00000475996 KCNQ3O43525 872 aa16.65■□□□□ 0.26
HLA-F-224ENST00000475996 DUSP27Q5VZP5 1158 aa16.65■□□□□ 0.26
HLA-F-224ENST00000475996 MYH16Q9H6N6 1097 aa16.65■□□□□ 0.26
HLA-F-224ENST00000475996 FANCIQ9NVI1 1328 aa16.65■□□□□ 0.26
HLA-F-224ENST00000475996 BCL9O00512 1426 aa16.64■□□□□ 0.25
HLA-F-224ENST00000475996 KDM3BQ7LBC6 1761 aa16.64■□□□□ 0.25
HLA-F-224ENST00000475996 FAM196AQ6ZSG2 479 aa16.63■□□□□ 0.25
HLA-F-224ENST00000475996 PTF1AQ7RTS3 328 aa16.63■□□□□ 0.25
HLA-F-224ENST00000475996 TRMT2AQ8IZ69 625 aaKnown RBP16.63■□□□□ 0.25
HLA-F-224ENST00000475996 NHSQ6T4R5 1651 aa16.62■□□□□ 0.25
HLA-F-224ENST00000475996 BABAM1Q9NWV8 329 aa16.61■□□□□ 0.25
HLA-F-224ENST00000475996 ASAP1Q9ULH1 1129 aa16.61■□□□□ 0.25
HLA-F-224ENST00000475996 KRT24Q2M2I5 525 aa16.6■□□□□ 0.25
HLA-F-224ENST00000475996 ZNF790Q6PG37 636 aa16.6■□□□□ 0.25
HLA-F-224ENST00000475996 PAPPAQ13219 1627 aa16.6■□□□□ 0.25
HLA-F-224ENST00000475996 TRIM37O94972 964 aa16.6■□□□□ 0.25
HLA-F-224ENST00000475996 EXOSC9Q06265 439 aaKnown RBP16.6■□□□□ 0.25
HLA-F-224ENST00000475996 TTC5Q8N0Z6 440 aa16.6■□□□□ 0.25
HLA-F-224ENST00000475996 BTAF1O14981 1849 aa16.59■□□□□ 0.25
HLA-F-224ENST00000475996 ATG3Q9NT62 314 aa16.59■□□□□ 0.25
HLA-F-224ENST00000475996 ELL2O00472 640 aaPredicted RBP16.58■□□□□ 0.24
HLA-F-224ENST00000475996 EIF4A1P60842 406 aaKnown RBP16.58■□□□□ 0.24
HLA-F-224ENST00000475996 PTCD1O75127 700 aaKnown RBP16.57■□□□□ 0.24
HLA-F-224ENST00000475996 TSPYL6Q8N831 410 aa16.57■□□□□ 0.24
HLA-F-224ENST00000475996 C8orf58Q8NAV2 365 aa16.57■□□□□ 0.24
HLA-F-224ENST00000475996 BCL11BQ9C0K0 894 aaPredicted RBP16.57■□□□□ 0.24
HLA-F-224ENST00000475996 UBR2Q8IWV8 1755 aa16.56■□□□□ 0.24
HLA-F-224ENST00000475996 ZNF496Q96IT1 587 aaPredicted RBP16.56■□□□□ 0.24
HLA-F-224ENST00000475996 RBM42Q9BTD8 480 aaKnown RBP16.56■□□□□ 0.24
HLA-F-224ENST00000475996 KCPQ6ZWJ8 1503 aa16.56■□□□□ 0.24
HLA-F-224ENST00000475996 FMNL2Q96PY5 1086 aa16.55■□□□□ 0.24
HLA-F-224ENST00000475996 PALLDQ8WX93 1383 aa16.54■□□□□ 0.24
HLA-F-224ENST00000475996 PRAMEF22A3QJZ6 481 aa16.54■□□□□ 0.24
HLA-F-224ENST00000475996 TWISTNBQ3B726 338 aaPredicted RBP16.54■□□□□ 0.24
HLA-F-224ENST00000475996 SMARCC1Q92922 1105 aaPredicted RBP16.54■□□□□ 0.24
HLA-F-224ENST00000475996 CENPBP07199 599 aaPredicted RBP16.53■□□□□ 0.24
HLA-F-224ENST00000475996 HEG1Q9ULI3 1381 aa16.53■□□□□ 0.24
HLA-F-224ENST00000475996 C5P01031 1676 aa16.53■□□□□ 0.24
HLA-F-224ENST00000475996 GIGYF1O75420 1035 aaPredicted RBP16.52■□□□□ 0.24
HLA-F-224ENST00000475996 NECTIN2Q92692 538 aa16.52■□□□□ 0.24
HLA-F-224ENST00000475996 VAMP4O75379 141 aa16.51■□□□□ 0.23
HLA-F-224ENST00000475996 SLC4A9Q96Q91 983 aa16.51■□□□□ 0.23
HLA-F-224ENST00000475996 TNS1Q9HBL0 1735 aaKnown RBP16.51■□□□□ 0.23
HLA-F-224ENST00000475996 LOC102724428A0A0B4J2F2 783 aa16.5■□□□□ 0.23
HLA-F-224ENST00000475996 TCERG1O14776 1098 aaKnown RBP16.5■□□□□ 0.23
HLA-F-224ENST00000475996 APBA3O96018 575 aa16.5■□□□□ 0.23
HLA-F-224ENST00000475996 SNRPA1P09661 255 aaKnown RBP16.5■□□□□ 0.23
HLA-F-224ENST00000475996 EIF2S2P20042 333 aaKnown RBP16.5■□□□□ 0.23
HLA-F-224ENST00000475996 SIK1P57059 783 aa16.5■□□□□ 0.23
HLA-F-224ENST00000475996 KCNQ4P56696 695 aa16.5■□□□□ 0.23
HLA-F-224ENST00000475996 USP16Q9Y5T5 823 aa16.5■□□□□ 0.23
HLA-F-224ENST00000475996 ATP6V1AP38606 617 aa16.49■□□□□ 0.23
HLA-F-224ENST00000475996 HDGFL1Q5TGJ6 251 aa16.49■□□□□ 0.23
HLA-F-224ENST00000475996 DNAJC10Q8IXB1 793 aa16.49■□□□□ 0.23
HLA-F-224ENST00000475996 LY75O60449 1722 aa16.48■□□□□ 0.23
HLA-F-224ENST00000475996 TJP1Q07157 1748 aa16.48■□□□□ 0.23
HLA-F-224ENST00000475996 HOXB7P09629 217 aa16.48■□□□□ 0.23
HLA-F-224ENST00000475996 CT47B1P0C2W7 299 aaPredicted RBP16.48■□□□□ 0.23
HLA-F-224ENST00000475996 VSIG10Q8N0Z9 540 aa16.48■□□□□ 0.23
HLA-F-224ENST00000475996 BCL2L13Q9BXK5 485 aa16.48■□□□□ 0.23
HLA-F-224ENST00000475996 LAMB4A4D0S4 1761 aa16.47■□□□□ 0.23
HLA-F-224ENST00000475996 RCAN3Q9UKA8 241 aa16.47■□□□□ 0.23
HLA-F-224ENST00000475996 RARSP54136 660 aaKnown RBP16.46■□□□□ 0.23
HLA-F-224ENST00000475996 ITPK1Q13572 414 aa16.46■□□□□ 0.23
HLA-F-224ENST00000475996 CCNL1Q9UK58 526 aaPredicted RBP16.46■□□□□ 0.23
HLA-F-224ENST00000475996 SOS1Q07889 1333 aaPredicted RBP16.46■□□□□ 0.23
HLA-F-224ENST00000475996 SF3B2Q13435 895 aaKnown RBP16.45■□□□□ 0.22
HLA-F-224ENST00000475996 SSH1Q8WYL5 1049 aa16.45■□□□□ 0.22
HLA-F-224ENST00000475996 BCAR3O75815 825 aa16.45■□□□□ 0.22
HLA-F-224ENST00000475996 ANXA1P04083 346 aa16.45■□□□□ 0.22
HLA-F-224ENST00000475996 PIP4K2AP48426 406 aaPredicted RBP16.45■□□□□ 0.22
HLA-F-224ENST00000475996 CCDC30Q5VVM6 783 aa16.45■□□□□ 0.22
HLA-F-224ENST00000475996 ILDR2Q71H61 639 aa16.45■□□□□ 0.22
HLA-F-224ENST00000475996 SMC4Q9NTJ3 1288 aa16.45■□□□□ 0.22
HLA-F-224ENST00000475996 PLSCR1O15162 318 aa16.44■□□□□ 0.22
HLA-F-224ENST00000475996 A1BGP04217 495 aa16.44■□□□□ 0.22
HLA-F-224ENST00000475996 LINC00116Q8NCU8 138 aa16.44■□□□□ 0.22
HLA-F-224ENST00000475996 TEX13AQ9BXU3 409 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms