RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 HMGB2P26583 209 aaKnown RBP15.42■□□□□ 0.06
NUDCD3-206ENST00000475952 MTHFSP49914 203 aa15.42■□□□□ 0.06
NUDCD3-206ENST00000475952 PLEKHO1Q53GL0 409 aaPredicted RBP15.42■□□□□ 0.06
NUDCD3-206ENST00000475952 COL3A1P02461 1466 aaPredicted RBP15.41■□□□□ 0.06
NUDCD3-206ENST00000475952 HSP90AB1P08238 724 aaKnown RBP15.41■□□□□ 0.06
NUDCD3-206ENST00000475952 IL13P35225 146 aa15.41■□□□□ 0.06
NUDCD3-206ENST00000475952 AMOTQ4VCS5 1084 aa15.41■□□□□ 0.06
NUDCD3-206ENST00000475952 SULT6B1Q6IMI4 303 aa15.41■□□□□ 0.06
NUDCD3-206ENST00000475952 COL23A1Q86Y22 540 aaPredicted RBP15.41■□□□□ 0.06
NUDCD3-206ENST00000475952 SMARCC1Q92922 1105 aaPredicted RBP15.41■□□□□ 0.06
NUDCD3-206ENST00000475952 TMOD3Q9NYL9 352 aa15.41■□□□□ 0.06
NUDCD3-206ENST00000475952 MSL1Q68DK7 614 aa15.4■□□□□ 0.06
NUDCD3-206ENST00000475952 AEBP1Q8IUX7 1158 aa15.4■□□□□ 0.06
NUDCD3-206ENST00000475952 CNGB1Q14028 1251 aaPredicted RBP15.39■□□□□ 0.05
NUDCD3-206ENST00000475952 ZNF526Q8TF50 670 aaPredicted RBP15.39■□□□□ 0.05
NUDCD3-206ENST00000475952 ADAMTS7Q9UKP4 1686 aa15.38■□□□□ 0.05
NUDCD3-206ENST00000475952 KDM6AO15550 1401 aaPredicted RBP15.38■□□□□ 0.05
NUDCD3-206ENST00000475952 MSH5O43196 834 aa15.38■□□□□ 0.05
NUDCD3-206ENST00000475952 DIAPH1O60610 1272 aaKnown RBP15.38■□□□□ 0.05
NUDCD3-206ENST00000475952 C1orf141Q5JVX7 400 aa15.38■□□□□ 0.05
NUDCD3-206ENST00000475952 ZNF530Q6P9A1 599 aaPredicted RBP15.38■□□□□ 0.05
NUDCD3-206ENST00000475952 PIGBQ92521 554 aa15.38■□□□□ 0.05
NUDCD3-206ENST00000475952 CICQ96RK0 1608 aaPredicted RBP15.38■□□□□ 0.05
NUDCD3-206ENST00000475952 DCAF5Q96JK2 942 aa15.37■□□□□ 0.05
NUDCD3-206ENST00000475952 CD2APQ9Y5K6 639 aa15.37■□□□□ 0.05
NUDCD3-206ENST00000475952 ERVV-2B6SEH9 535 aa15.36■□□□□ 0.05
NUDCD3-206ENST00000475952 SIPA1L3O60292 1781 aaPredicted RBP15.36■□□□□ 0.05
NUDCD3-206ENST00000475952 TJP1Q07157 1748 aa15.35■□□□□ 0.05
NUDCD3-206ENST00000475952 MYH14Q7Z406 1995 aaKnown RBP15.35■□□□□ 0.05
NUDCD3-206ENST00000475952 C4AP0C0L4 1744 aa15.34■□□□□ 0.05
NUDCD3-206ENST00000475952 UBR2Q8IWV8 1755 aa15.34■□□□□ 0.05
NUDCD3-206ENST00000475952 HMOX1P09601 288 aa15.34■□□□□ 0.05
NUDCD3-206ENST00000475952 DLG5Q8TDM6 1919 aa15.34■□□□□ 0.05
NUDCD3-206ENST00000475952 WDR90Q96KV7 1748 aa15.34■□□□□ 0.05
NUDCD3-206ENST00000475952 KIAA1551Q9HCM1 1747 aa15.34■□□□□ 0.05
NUDCD3-206ENST00000475952 MRC1P22897 1456 aa15.33■□□□□ 0.05
NUDCD3-206ENST00000475952 LOC102724428A0A0B4J2F2 783 aa15.33■□□□□ 0.04
NUDCD3-206ENST00000475952 KIF3CO14782 793 aa15.33■□□□□ 0.04
NUDCD3-206ENST00000475952 SIK1P57059 783 aa15.33■□□□□ 0.04
NUDCD3-206ENST00000475952 CFAP53Q96M91 514 aa15.33■□□□□ 0.04
NUDCD3-206ENST00000475952 KIF13BQ9NQT8 1826 aa15.33■□□□□ 0.04
NUDCD3-206ENST00000475952 CABP4P57796 275 aa15.32■□□□□ 0.04
NUDCD3-206ENST00000475952 AK7Q96M32 723 aa15.32■□□□□ 0.04
NUDCD3-206ENST00000475952 ASAP1Q9ULH1 1129 aa15.32■□□□□ 0.04
NUDCD3-206ENST00000475952 U2SURPO15042 1029 aaKnown RBP15.31■□□□□ 0.04
NUDCD3-206ENST00000475952 AKAP4Q5JQC9 854 aa15.31■□□□□ 0.04
NUDCD3-206ENST00000475952 FLAD1Q8NFF5 587 aa15.31■□□□□ 0.04
NUDCD3-206ENST00000475952 N4BP2Q86UW6 1770 aaPredicted RBP15.31■□□□□ 0.04
NUDCD3-206ENST00000475952 ATP6V1AP38606 617 aa15.3■□□□□ 0.04
NUDCD3-206ENST00000475952 ATG3Q9NT62 314 aa15.3■□□□□ 0.04
NUDCD3-206ENST00000475952 WWC3Q9ULE0 1092 aa15.3■□□□□ 0.04
NUDCD3-206ENST00000475952 BRCA1P38398 1863 aaKnown RBP15.29■□□□□ 0.04
NUDCD3-206ENST00000475952 PPP2R1AP30153 589 aa15.28■□□□□ 0.04
NUDCD3-206ENST00000475952 APLP1P51693 650 aa15.28■□□□□ 0.04
NUDCD3-206ENST00000475952 AMIGO3Q86WK7 504 aa15.28■□□□□ 0.04
NUDCD3-206ENST00000475952 DNAJC5GQ8N7S2 189 aa15.27■□□□□ 0.04
NUDCD3-206ENST00000475952 LINC00116Q8NCU8 138 aa15.27■□□□□ 0.04
NUDCD3-206ENST00000475952 RBM42Q9BTD8 480 aaKnown RBP15.27■□□□□ 0.04
NUDCD3-206ENST00000475952 NUDCQ9Y266 331 aa15.27■□□□□ 0.04
NUDCD3-206ENST00000475952 SSFA2P28290 1259 aa15.26■□□□□ 0.03
NUDCD3-206ENST00000475952 ITPK1Q13572 414 aa15.26■□□□□ 0.03
NUDCD3-206ENST00000475952 MTHFSDQ2M296 383 aaKnown RBP15.26■□□□□ 0.03
NUDCD3-206ENST00000475952 NFATC2IPQ8NCF5 419 aa15.26■□□□□ 0.03
NUDCD3-206ENST00000475952 GNPATO15228 680 aa15.25■□□□□ 0.03
NUDCD3-206ENST00000475952 PHF14O94880 888 aa15.25■□□□□ 0.03
NUDCD3-206ENST00000475952 GAS2L2Q8NHY3 880 aa15.25■□□□□ 0.03
NUDCD3-206ENST00000475952 SLC52A2Q9HAB3 445 aa15.25■□□□□ 0.03
NUDCD3-206ENST00000475952 KCPQ6ZWJ8 1503 aa15.24■□□□□ 0.03
NUDCD3-206ENST00000475952 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.24■□□□□ 0.03
NUDCD3-206ENST00000475952 RNMTO43148 476 aaKnown RBP15.24■□□□□ 0.03
NUDCD3-206ENST00000475952 SMIM5Q71RC9 77 aa15.24■□□□□ 0.03
NUDCD3-206ENST00000475952 CNTNAP4Q9C0A0 1308 aa15.23■□□□□ 0.03
NUDCD3-206ENST00000475952 PXDNLA1KZ92 1463 aa15.23■□□□□ 0.03
NUDCD3-206ENST00000475952 ARFGEF1Q9Y6D6 1849 aa15.23■□□□□ 0.03
NUDCD3-206ENST00000475952 PTCD1O75127 700 aaKnown RBP15.22■□□□□ 0.03
NUDCD3-206ENST00000475952 PRKAR2BP31323 418 aa15.22■□□□□ 0.03
NUDCD3-206ENST00000475952 SLC4A9Q96Q91 983 aa15.22■□□□□ 0.03
NUDCD3-206ENST00000475952 RSPH6AQ9H0K4 717 aa15.22■□□□□ 0.03
NUDCD3-206ENST00000475952 LGR6Q9HBX8 967 aa15.22■□□□□ 0.03
NUDCD3-206ENST00000475952 GNAT3A8MTJ3 354 aa15.21■□□□□ 0.03
NUDCD3-206ENST00000475952 TOMM70O94826 608 aa15.21■□□□□ 0.03
NUDCD3-206ENST00000475952 U2AF1L5P0DN76 240 aaPredicted RBP15.21■□□□□ 0.03
NUDCD3-206ENST00000475952 U2AF1Q01081 240 aaKnown RBP eCLIP15.21■□□□□ 0.03
NUDCD3-206ENST00000475952 RTCBQ9Y3I0 505 aaKnown RBP15.21■□□□□ 0.03
NUDCD3-206ENST00000475952 RC3H1Q5TC82 1133 aaKnown RBP15.2■□□□□ 0.02
NUDCD3-206ENST00000475952 LAMB4A4D0S4 1761 aa15.2■□□□□ 0.02
NUDCD3-206ENST00000475952 ADRA2BP18089 450 aa15.19■□□□□ 0.02
NUDCD3-206ENST00000475952 TEFQ10587 303 aa15.19■□□□□ 0.02
NUDCD3-206ENST00000475952 KDM3BQ7LBC6 1761 aa15.19■□□□□ 0.02
NUDCD3-206ENST00000475952 AFDNP55196 1824 aaKnown RBP15.18■□□□□ 0.02
NUDCD3-206ENST00000475952 FCHSD2O94868 740 aa15.18■□□□□ 0.02
NUDCD3-206ENST00000475952 TRAPPC3LQ5T215 181 aa15.18■□□□□ 0.02
NUDCD3-206ENST00000475952 COL13A1Q5TAT6 717 aaPredicted RBP15.18■□□□□ 0.02
NUDCD3-206ENST00000475952 TTC5Q8N0Z6 440 aa15.18■□□□□ 0.02
NUDCD3-206ENST00000475952 NMRK2Q9NPI5 230 aa15.18■□□□□ 0.02
NUDCD3-206ENST00000475952 TNRC6CQ9HCJ0 1690 aaKnown RBP15.18■□□□□ 0.02
NUDCD3-206ENST00000475952 C10orf71Q711Q0 1435 aa15.17■□□□□ 0.02
NUDCD3-206ENST00000475952 SBF1O95248 1867 aa15.17■□□□□ 0.02
NUDCD3-206ENST00000475952 CEMIPQ8WUJ3 1361 aa15.17■□□□□ 0.02
NUDCD3-206ENST00000475952 RPS6KA4O75676 772 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms