RNA–Protein interactions for RNA: ENST00000475831.1

GBX1-202, Transcript of gastrulation brain homeobox 1, humanhuman

TSL 4

Gene GBX1, Length 556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBX1-202ENST00000475831 ZBTB7AO95365 584 aa22.96■■□□□ 1.27
GBX1-202ENST00000475831 ATP6V1AP38606 617 aa22.96■■□□□ 1.27
GBX1-202ENST00000475831 PAPPAQ13219 1627 aa22.96■■□□□ 1.27
GBX1-202ENST00000475831 ITPK1Q13572 414 aa22.95■■□□□ 1.26
GBX1-202ENST00000475831 SLC4A9Q96Q91 983 aa22.95■■□□□ 1.26
GBX1-202ENST00000475831 SCN11AQ9UI33 1791 aa22.95■■□□□ 1.26
GBX1-202ENST00000475831 ATF5Q9Y2D1 282 aaPredicted RBP22.95■■□□□ 1.26
GBX1-202ENST00000475831 PTCD1O75127 700 aaKnown RBP22.94■■□□□ 1.26
GBX1-202ENST00000475831 MAP3K5Q99683 1374 aa22.93■■□□□ 1.26
GBX1-202ENST00000475831 SLC39A6Q13433 755 aa22.93■■□□□ 1.26
GBX1-202ENST00000475831 SPON1Q9HCB6 807 aa22.93■■□□□ 1.26
GBX1-202ENST00000475831 LINC00116Q8NCU8 138 aa22.92■■□□□ 1.26
GBX1-202ENST00000475831 PLEKHF1Q96S99 279 aa22.92■■□□□ 1.26
GBX1-202ENST00000475831 PNPLA7Q6ZV29 1317 aa22.91■■□□□ 1.26
GBX1-202ENST00000475831 HMGB2P26583 209 aaKnown RBP22.91■■□□□ 1.26
GBX1-202ENST00000475831 SMIM5Q71RC9 77 aa22.91■■□□□ 1.26
GBX1-202ENST00000475831 NEFMP07197 916 aa22.9■■□□□ 1.26
GBX1-202ENST00000475831 VIRMAQ69YN4 1812 aaKnown RBP22.89■■□□□ 1.26
GBX1-202ENST00000475831 MSH5O43196 834 aa22.89■■□□□ 1.25
GBX1-202ENST00000475831 TEFQ10587 303 aa22.89■■□□□ 1.25
GBX1-202ENST00000475831 COL23A1Q86Y22 540 aaPredicted RBP22.89■■□□□ 1.25
GBX1-202ENST00000475831 PNNQ9H307 717 aaKnown RBP22.89■■□□□ 1.25
GBX1-202ENST00000475831 CASZ1Q86V15 1759 aa22.89■■□□□ 1.25
GBX1-202ENST00000475831 TAF1LQ8IZX4 1826 aa22.88■■□□□ 1.25
GBX1-202ENST00000475831 DCTN1Q14203 1278 aa22.88■■□□□ 1.25
GBX1-202ENST00000475831 MCM10Q7L590 875 aa22.88■■□□□ 1.25
GBX1-202ENST00000475831 RTF1Q92541 710 aaKnown RBP22.88■■□□□ 1.25
GBX1-202ENST00000475831 AK7Q96M32 723 aa22.88■■□□□ 1.25
GBX1-202ENST00000475831 C5P01031 1676 aa22.87■■□□□ 1.25
GBX1-202ENST00000475831 LRP5O75197 1615 aa22.87■■□□□ 1.25
GBX1-202ENST00000475831 AMIGO3Q86WK7 504 aa22.87■■□□□ 1.25
GBX1-202ENST00000475831 MTFR1LQ9H019 292 aa22.86■■□□□ 1.25
GBX1-202ENST00000475831 ADAMTS7Q9UKP4 1686 aa22.85■■□□□ 1.25
GBX1-202ENST00000475831 WDR43Q15061 677 aaKnown RBP eCLIP22.85■■□□□ 1.25
GBX1-202ENST00000475831 ADAMTS8Q9UP79 889 aa22.85■■□□□ 1.25
GBX1-202ENST00000475831 MAPK8IP3Q9UPT6 1336 aa22.84■■□□□ 1.25
GBX1-202ENST00000475831 HTATSF1O43719 755 aaKnown RBP22.84■■□□□ 1.25
GBX1-202ENST00000475831 PHF14O94880 888 aa22.84■■□□□ 1.25
GBX1-202ENST00000475831 PTGER2P43116 358 aa22.84■■□□□ 1.25
GBX1-202ENST00000475831 NFE2L2Q16236 605 aa22.84■■□□□ 1.25
GBX1-202ENST00000475831 CCDC146Q8IYE0 955 aa22.84■■□□□ 1.25
GBX1-202ENST00000475831 C4BP0C0L5 1744 aa22.84■■□□□ 1.25
GBX1-202ENST00000475831 TUBGCP6Q96RT7 1819 aa22.84■■□□□ 1.25
GBX1-202ENST00000475831 GNPATO15228 680 aa22.83■■□□□ 1.25
GBX1-202ENST00000475831 ANP32CO43423 234 aa22.83■■□□□ 1.25
GBX1-202ENST00000475831 CCDC184Q52MB2 194 aa22.83■■□□□ 1.25
GBX1-202ENST00000475831 SLC16A10Q8TF71 515 aa22.83■■□□□ 1.25
GBX1-202ENST00000475831 PPP1R1BQ9UD71 204 aaPredicted RBP22.83■■□□□ 1.25
GBX1-202ENST00000475831 CEMIPQ8WUJ3 1361 aa22.83■■□□□ 1.25
GBX1-202ENST00000475831 MRC1P22897 1456 aa22.83■■□□□ 1.25
GBX1-202ENST00000475831 FLAD1Q8NFF5 587 aa22.82■■□□□ 1.24
GBX1-202ENST00000475831 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.81■■□□□ 1.24
GBX1-202ENST00000475831 BTBD11A6QL63 1104 aa22.81■■□□□ 1.24
GBX1-202ENST00000475831 KCNQ3O43525 872 aa22.81■■□□□ 1.24
GBX1-202ENST00000475831 RC3H1Q5TC82 1133 aaKnown RBP22.81■■□□□ 1.24
GBX1-202ENST00000475831 DNAJC10Q8IXB1 793 aa22.81■■□□□ 1.24
GBX1-202ENST00000475831 TTC5Q8N0Z6 440 aa22.81■■□□□ 1.24
GBX1-202ENST00000475831 ZNF790Q6PG37 636 aa22.8■■□□□ 1.24
GBX1-202ENST00000475831 QSER1Q2KHR3 1735 aa22.79■■□□□ 1.24
GBX1-202ENST00000475831 RIPK4P57078 832 aa22.79■■□□□ 1.24
GBX1-202ENST00000475831 ZNF496Q96IT1 587 aaPredicted RBP22.79■■□□□ 1.24
GBX1-202ENST00000475831 SGIP1Q9BQI5 828 aa22.79■■□□□ 1.24
GBX1-202ENST00000475831 CRKLP46109 303 aaKnown RBP22.78■■□□□ 1.24
GBX1-202ENST00000475831 MSL1Q68DK7 614 aa22.78■■□□□ 1.24
GBX1-202ENST00000475831 THUMPD2Q9BTF0 503 aaKnown RBP22.78■■□□□ 1.24
GBX1-202ENST00000475831 MIS18AQ9NYP9 233 aa22.78■■□□□ 1.24
GBX1-202ENST00000475831 RTCBQ9Y3I0 505 aaKnown RBP22.78■■□□□ 1.24
GBX1-202ENST00000475831 SSFA2P28290 1259 aa22.77■■□□□ 1.24
GBX1-202ENST00000475831 TMPOP42166 694 aaKnown RBP22.77■■□□□ 1.24
GBX1-202ENST00000475831 TAF7Q15545 349 aaPredicted RBP22.77■■□□□ 1.24
GBX1-202ENST00000475831 NEUROD2Q15784 382 aa22.77■■□□□ 1.24
GBX1-202ENST00000475831 TRAPPC3LQ5T215 181 aa22.77■■□□□ 1.24
GBX1-202ENST00000475831 RUNDC1Q96C34 613 aa22.77■■□□□ 1.24
GBX1-202ENST00000475831 RRP7AQ9Y3A4 280 aaKnown RBP22.77■■□□□ 1.24
GBX1-202ENST00000475831 DLG5Q8TDM6 1919 aa22.76■■□□□ 1.23
GBX1-202ENST00000475831 RPS6KA4O75676 772 aa22.76■■□□□ 1.23
GBX1-202ENST00000475831 INTS5Q6P9B9 1019 aaKnown RBP22.76■■□□□ 1.23
GBX1-202ENST00000475831 ZNF831Q5JPB2 1677 aa22.76■■□□□ 1.23
GBX1-202ENST00000475831 UBR3Q6ZT12 1888 aa22.76■■□□□ 1.23
GBX1-202ENST00000475831 CNTNAP4Q9C0A0 1308 aa22.76■■□□□ 1.23
GBX1-202ENST00000475831 CYP19A1P11511 503 aaPredicted RBP22.75■■□□□ 1.23
GBX1-202ENST00000475831 VSIG10Q8N0Z9 540 aa22.75■■□□□ 1.23
GBX1-202ENST00000475831 ARHGEF1Q92888 912 aaKnown RBP22.75■■□□□ 1.23
GBX1-202ENST00000475831 ARXQ96QS3 562 aa22.75■■□□□ 1.23
GBX1-202ENST00000475831 MYH14Q7Z406 1995 aaKnown RBP22.75■■□□□ 1.23
GBX1-202ENST00000475831 KCPQ6ZWJ8 1503 aa22.75■■□□□ 1.23
GBX1-202ENST00000475831 SIPA1L3O60292 1781 aaPredicted RBP22.75■■□□□ 1.23
GBX1-202ENST00000475831 POLD1P28340 1107 aa22.73■■□□□ 1.23
GBX1-202ENST00000475831 FMNL2Q96PY5 1086 aa22.73■■□□□ 1.23
GBX1-202ENST00000475831 COL5A3P25940 1745 aaPredicted RBP22.72■■□□□ 1.23
GBX1-202ENST00000475831 TJP1Q07157 1748 aa22.72■■□□□ 1.23
GBX1-202ENST00000475831 CCDC87Q9NVE4 849 aa22.72■■□□□ 1.23
GBX1-202ENST00000475831 HEG1Q9ULI3 1381 aa22.71■■□□□ 1.23
GBX1-202ENST00000475831 STARD3NLO95772 234 aa22.7■■□□□ 1.22
GBX1-202ENST00000475831 RFC4P35249 363 aa22.7■■□□□ 1.22
GBX1-202ENST00000475831 MRS2Q9HD23 443 aa22.7■■□□□ 1.22
GBX1-202ENST00000475831 ADRA2BP18089 450 aa22.69■■□□□ 1.22
GBX1-202ENST00000475831 TEX13AQ9BXU3 409 aaPredicted RBP22.69■■□□□ 1.22
GBX1-202ENST00000475831 FHDC1Q9C0D6 1143 aaPredicted RBP22.69■■□□□ 1.22
GBX1-202ENST00000475831 UBR2Q8IWV8 1755 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms