RNA–Protein interactions for RNA: ENST00000475722.5

PRUNE1-210, Transcript of prune exopolyphosphatase 1, humanhuman

TSL 3

Gene PRUNE1, Length 916 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-210ENST00000475722 LAS1LQ9Y4W2 734 aaKnown RBP19.55■□□□□ 0.72
PRUNE1-210ENST00000475722 E9PSI1 815 aa19.54■□□□□ 0.72
PRUNE1-210ENST00000475722 CHL1O00533 1208 aa19.53■□□□□ 0.72
PRUNE1-210ENST00000475722 PRIM1P49642 420 aaKnown RBP19.53■□□□□ 0.72
PRUNE1-210ENST00000475722 ACSBG1Q96GR2 724 aa19.53■□□□□ 0.72
PRUNE1-210ENST00000475722 DOT1LQ8TEK3 1739 aa19.52■□□□□ 0.72
PRUNE1-210ENST00000475722 TRMT2AQ8IZ69 625 aaKnown RBP19.52■□□□□ 0.72
PRUNE1-210ENST00000475722 BABAM1Q9NWV8 329 aa19.52■□□□□ 0.72
PRUNE1-210ENST00000475722 TMOD3Q9NYL9 352 aa19.52■□□□□ 0.72
PRUNE1-210ENST00000475722 MIS18AQ9NYP9 233 aa19.52■□□□□ 0.72
PRUNE1-210ENST00000475722 SIPA1L3O60292 1781 aaPredicted RBP19.52■□□□□ 0.71
PRUNE1-210ENST00000475722 BTBD11A6QL63 1104 aa19.51■□□□□ 0.71
PRUNE1-210ENST00000475722 FAM196AQ6ZSG2 479 aa19.51■□□□□ 0.71
PRUNE1-210ENST00000475722 SYTL4Q96C24 671 aaPredicted RBP19.51■□□□□ 0.71
PRUNE1-210ENST00000475722 MYH16Q9H6N6 1097 aa19.51■□□□□ 0.71
PRUNE1-210ENST00000475722 MBIPQ9NS73 344 aa19.51■□□□□ 0.71
PRUNE1-210ENST00000475722 TSPYL4Q9UJ04 414 aa19.51■□□□□ 0.71
PRUNE1-210ENST00000475722 PIGBQ92521 554 aa19.5■□□□□ 0.71
PRUNE1-210ENST00000475722 TSR2Q969E8 191 aaKnown RBP19.5■□□□□ 0.71
PRUNE1-210ENST00000475722 FANCIQ9NVI1 1328 aa19.5■□□□□ 0.71
PRUNE1-210ENST00000475722 ITGB4P16144 1822 aa19.49■□□□□ 0.71
PRUNE1-210ENST00000475722 KCNQ2O43526 872 aa19.49■□□□□ 0.71
PRUNE1-210ENST00000475722 DUSP27Q5VZP5 1158 aa19.49■□□□□ 0.71
PRUNE1-210ENST00000475722 SLC39A6Q13433 755 aa19.48■□□□□ 0.71
PRUNE1-210ENST00000475722 KAT6BQ8WYB5 2073 aa19.47■□□□□ 0.71
PRUNE1-210ENST00000475722 KCNQ3O43525 872 aa19.47■□□□□ 0.71
PRUNE1-210ENST00000475722 ZNF790Q6PG37 636 aa19.46■□□□□ 0.71
PRUNE1-210ENST00000475722 NHSQ6T4R5 1651 aa19.46■□□□□ 0.71
PRUNE1-210ENST00000475722 KDM3BQ7LBC6 1761 aa19.45■□□□□ 0.7
PRUNE1-210ENST00000475722 PTF1AQ7RTS3 328 aa19.45■□□□□ 0.7
PRUNE1-210ENST00000475722 ATG3Q9NT62 314 aa19.45■□□□□ 0.7
PRUNE1-210ENST00000475722 ASAP1Q9ULH1 1129 aa19.45■□□□□ 0.7
PRUNE1-210ENST00000475722 SBF2Q86WG5 1849 aa19.45■□□□□ 0.7
PRUNE1-210ENST00000475722 BCL11BQ9C0K0 894 aaPredicted RBP19.44■□□□□ 0.7
PRUNE1-210ENST00000475722 EIF4A1P60842 406 aaKnown RBP19.43■□□□□ 0.7
PRUNE1-210ENST00000475722 EXOSC9Q06265 439 aaKnown RBP19.43■□□□□ 0.7
PRUNE1-210ENST00000475722 TTC5Q8N0Z6 440 aa19.43■□□□□ 0.7
PRUNE1-210ENST00000475722 PAPPAQ13219 1627 aa19.43■□□□□ 0.7
PRUNE1-210ENST00000475722 TRIM37O94972 964 aa19.42■□□□□ 0.7
PRUNE1-210ENST00000475722 KRT24Q2M2I5 525 aa19.41■□□□□ 0.7
PRUNE1-210ENST00000475722 C8orf58Q8NAV2 365 aa19.41■□□□□ 0.7
PRUNE1-210ENST00000475722 ZNF496Q96IT1 587 aaPredicted RBP19.41■□□□□ 0.7
PRUNE1-210ENST00000475722 SMARCC1Q92922 1105 aaPredicted RBP19.4■□□□□ 0.7
PRUNE1-210ENST00000475722 TSPYL6Q8N831 410 aa19.39■□□□□ 0.69
PRUNE1-210ENST00000475722 FMNL2Q96PY5 1086 aa19.39■□□□□ 0.69
PRUNE1-210ENST00000475722 HEG1Q9ULI3 1381 aa19.39■□□□□ 0.69
PRUNE1-210ENST00000475722 KCPQ6ZWJ8 1503 aa19.39■□□□□ 0.69
PRUNE1-210ENST00000475722 EP400Q96L91 3159 aa19.39■□□□□ 0.69
PRUNE1-210ENST00000475722 BTAF1O14981 1849 aa19.39■□□□□ 0.69
PRUNE1-210ENST00000475722 ELL2O00472 640 aaPredicted RBP19.38■□□□□ 0.69
PRUNE1-210ENST00000475722 PTCD1O75127 700 aaKnown RBP19.38■□□□□ 0.69
PRUNE1-210ENST00000475722 UBR2Q8IWV8 1755 aa19.38■□□□□ 0.69
PRUNE1-210ENST00000475722 PALLDQ8WX93 1383 aa19.37■□□□□ 0.69
PRUNE1-210ENST00000475722 GIGYF1O75420 1035 aaPredicted RBP19.37■□□□□ 0.69
PRUNE1-210ENST00000475722 TWISTNBQ3B726 338 aaPredicted RBP19.37■□□□□ 0.69
PRUNE1-210ENST00000475722 RBM42Q9BTD8 480 aaKnown RBP19.37■□□□□ 0.69
PRUNE1-210ENST00000475722 VAMP4O75379 141 aa19.35■□□□□ 0.69
PRUNE1-210ENST00000475722 SNRPA1P09661 255 aaKnown RBP19.35■□□□□ 0.69
PRUNE1-210ENST00000475722 CT47B1P0C2W7 299 aaPredicted RBP19.35■□□□□ 0.69
PRUNE1-210ENST00000475722 SLC4A9Q96Q91 983 aa19.35■□□□□ 0.69
PRUNE1-210ENST00000475722 SOS1Q07889 1333 aaPredicted RBP19.34■□□□□ 0.69
PRUNE1-210ENST00000475722 PRAMEF22A3QJZ6 481 aa19.34■□□□□ 0.69
PRUNE1-210ENST00000475722 HOXB7P09629 217 aa19.34■□□□□ 0.69
PRUNE1-210ENST00000475722 VSIG10Q8N0Z9 540 aa19.34■□□□□ 0.69
PRUNE1-210ENST00000475722 LOC102724428A0A0B4J2F2 783 aa19.33■□□□□ 0.68
PRUNE1-210ENST00000475722 CENPBP07199 599 aaPredicted RBP19.33■□□□□ 0.68
PRUNE1-210ENST00000475722 SIK1P57059 783 aa19.33■□□□□ 0.68
PRUNE1-210ENST00000475722 APBA3O96018 575 aa19.32■□□□□ 0.68
PRUNE1-210ENST00000475722 TNS1Q9HBL0 1735 aaKnown RBP19.31■□□□□ 0.68
PRUNE1-210ENST00000475722 USP16Q9Y5T5 823 aa19.31■□□□□ 0.68
PRUNE1-210ENST00000475722 PLSCR1O15162 318 aa19.3■□□□□ 0.68
PRUNE1-210ENST00000475722 EIF2S2P20042 333 aaKnown RBP19.3■□□□□ 0.68
PRUNE1-210ENST00000475722 ATP6V1AP38606 617 aa19.3■□□□□ 0.68
PRUNE1-210ENST00000475722 DNAJC10Q8IXB1 793 aa19.3■□□□□ 0.68
PRUNE1-210ENST00000475722 ZNF428Q96B54 188 aa19.3■□□□□ 0.68
PRUNE1-210ENST00000475722 TEX13AQ9BXU3 409 aaPredicted RBP19.3■□□□□ 0.68
PRUNE1-210ENST00000475722 C5P01031 1676 aa19.3■□□□□ 0.68
PRUNE1-210ENST00000475722 HDGFL1Q5TGJ6 251 aa19.29■□□□□ 0.68
PRUNE1-210ENST00000475722 LY75O60449 1722 aa19.28■□□□□ 0.68
PRUNE1-210ENST00000475722 RARSP54136 660 aaKnown RBP19.28■□□□□ 0.68
PRUNE1-210ENST00000475722 ITPK1Q13572 414 aa19.28■□□□□ 0.68
PRUNE1-210ENST00000475722 CCDC30Q5VVM6 783 aa19.28■□□□□ 0.68
PRUNE1-210ENST00000475722 NECTIN2Q92692 538 aa19.28■□□□□ 0.68
PRUNE1-210ENST00000475722 CHMP4AQ9BY43 222 aa19.28■□□□□ 0.68
PRUNE1-210ENST00000475722 CCNL1Q9UK58 526 aaPredicted RBP19.28■□□□□ 0.68
PRUNE1-210ENST00000475722 RCAN3Q9UKA8 241 aa19.28■□□□□ 0.68
PRUNE1-210ENST00000475722 ZNF831Q5JPB2 1677 aa19.27■□□□□ 0.68
PRUNE1-210ENST00000475722 SSH1Q8WYL5 1049 aa19.27■□□□□ 0.68
PRUNE1-210ENST00000475722 TJP1Q07157 1748 aa19.27■□□□□ 0.68
PRUNE1-210ENST00000475722 CICQ96RK0 1608 aaPredicted RBP19.26■□□□□ 0.67
PRUNE1-210ENST00000475722 TCERG1O14776 1098 aaKnown RBP19.26■□□□□ 0.67
PRUNE1-210ENST00000475722 STARD3NLO95772 234 aa19.26■□□□□ 0.67
PRUNE1-210ENST00000475722 CYP19A1P11511 503 aaPredicted RBP19.26■□□□□ 0.67
PRUNE1-210ENST00000475722 KCNQ4P56696 695 aa19.26■□□□□ 0.67
PRUNE1-210ENST00000475722 SF3B2Q13435 895 aaKnown RBP19.26■□□□□ 0.67
PRUNE1-210ENST00000475722 ALDH1L2Q3SY69 923 aa19.26■□□□□ 0.67
PRUNE1-210ENST00000475722 LAMB4A4D0S4 1761 aa19.26■□□□□ 0.67
PRUNE1-210ENST00000475722 TXNRD1Q16881 649 aa19.25■□□□□ 0.67
PRUNE1-210ENST00000475722 SLC27A3Q5K4L6 730 aa19.25■□□□□ 0.67
PRUNE1-210ENST00000475722 CCDC125Q86Z20 511 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms