RNA–Protein interactions for RNA: ENST00000475340.1

CFAP46-206, Transcript of cilia and flagella associated protein 46, humanhuman

TSL 1 (best)

Gene CFAP46, Length 1,156 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP46-206ENST00000475340 TMOD3Q9NYL9 352 aa22■■□□□ 1.11
CFAP46-206ENST00000475340 KNSTRNQ9Y448 316 aa22■■□□□ 1.11
CFAP46-206ENST00000475340 PHKG2P15735 406 aa21.99■■□□□ 1.11
CFAP46-206ENST00000475340 FLAD1Q8NFF5 587 aa21.98■■□□□ 1.11
CFAP46-206ENST00000475340 AK7Q96M32 723 aa21.97■■□□□ 1.11
CFAP46-206ENST00000475340 MYH14Q7Z406 1995 aaKnown RBP21.96■■□□□ 1.11
CFAP46-206ENST00000475340 GPR162Q16538 588 aa21.95■■□□□ 1.1
CFAP46-206ENST00000475340 LOC102724428A0A0B4J2F2 783 aa21.94■■□□□ 1.1
CFAP46-206ENST00000475340 SIK1P57059 783 aa21.94■■□□□ 1.1
CFAP46-206ENST00000475340 MSL1Q68DK7 614 aa21.94■■□□□ 1.1
CFAP46-206ENST00000475340 HSP90AB1P08238 724 aaKnown RBP21.93■■□□□ 1.1
CFAP46-206ENST00000475340 C4AP0C0L4 1744 aa21.93■■□□□ 1.1
CFAP46-206ENST00000475340 KIF7Q2M1P5 1343 aa21.93■■□□□ 1.1
CFAP46-206ENST00000475340 PLEKHO1Q53GL0 409 aaPredicted RBP21.93■■□□□ 1.1
CFAP46-206ENST00000475340 ASAP1Q9ULH1 1129 aa21.92■■□□□ 1.1
CFAP46-206ENST00000475340 PHF14O94880 888 aa21.91■■□□□ 1.1
CFAP46-206ENST00000475340 PELP1Q8IZL8 1130 aaKnown RBP21.91■■□□□ 1.1
CFAP46-206ENST00000475340 KIF13BQ9NQT8 1826 aa21.9■■□□□ 1.1
CFAP46-206ENST00000475340 ATP6V1AP38606 617 aa21.9■■□□□ 1.1
CFAP46-206ENST00000475340 AMOTQ4VCS5 1084 aa21.9■■□□□ 1.1
CFAP46-206ENST00000475340 ZNF530Q6P9A1 599 aaPredicted RBP21.9■■□□□ 1.1
CFAP46-206ENST00000475340 NLGN2Q8NFZ4 835 aa21.9■■□□□ 1.1
CFAP46-206ENST00000475340 DCAF5Q96JK2 942 aa21.9■■□□□ 1.1
CFAP46-206ENST00000475340 ERVV-2B6SEH9 535 aa21.89■■□□□ 1.09
CFAP46-206ENST00000475340 LINC00116Q8NCU8 138 aa21.89■■□□□ 1.09
CFAP46-206ENST00000475340 ATG3Q9NT62 314 aa21.89■■□□□ 1.09
CFAP46-206ENST00000475340 KDM6AO15550 1401 aaPredicted RBP21.89■■□□□ 1.09
CFAP46-206ENST00000475340 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.88■■□□□ 1.09
CFAP46-206ENST00000475340 SSFA2P28290 1259 aa21.88■■□□□ 1.09
CFAP46-206ENST00000475340 AMER1Q5JTC6 1135 aaPredicted RBP21.88■■□□□ 1.09
CFAP46-206ENST00000475340 C1orf141Q5JVX7 400 aa21.88■■□□□ 1.09
CFAP46-206ENST00000475340 AEBP1Q8IUX7 1158 aa21.88■■□□□ 1.09
CFAP46-206ENST00000475340 TJP1Q07157 1748 aa21.88■■□□□ 1.09
CFAP46-206ENST00000475340 CICQ96RK0 1608 aaPredicted RBP21.88■■□□□ 1.09
CFAP46-206ENST00000475340 KDRP35968 1356 aa21.87■■□□□ 1.09
CFAP46-206ENST00000475340 ITPK1Q13572 414 aa21.86■■□□□ 1.09
CFAP46-206ENST00000475340 SULT6B1Q6IMI4 303 aa21.86■■□□□ 1.09
CFAP46-206ENST00000475340 AMIGO3Q86WK7 504 aa21.86■■□□□ 1.09
CFAP46-206ENST00000475340 N4BP2Q86UW6 1770 aaPredicted RBP21.86■■□□□ 1.09
CFAP46-206ENST00000475340 GNPATO15228 680 aa21.85■■□□□ 1.09
CFAP46-206ENST00000475340 ZNF784Q8NCA9 323 aaPredicted RBP21.85■■□□□ 1.09
CFAP46-206ENST00000475340 IL13P35225 146 aa21.84■■□□□ 1.09
CFAP46-206ENST00000475340 MTHFSP49914 203 aa21.84■■□□□ 1.09
CFAP46-206ENST00000475340 CABP4P57796 275 aa21.84■■□□□ 1.09
CFAP46-206ENST00000475340 RBM42Q9BTD8 480 aaKnown RBP21.84■■□□□ 1.09
CFAP46-206ENST00000475340 CD2APQ9Y5K6 639 aa21.84■■□□□ 1.09
CFAP46-206ENST00000475340 SMIM5Q71RC9 77 aa21.83■■□□□ 1.09
CFAP46-206ENST00000475340 BRCA1P38398 1863 aaKnown RBP21.81■■□□□ 1.08
CFAP46-206ENST00000475340 CC2D1BQ5T0F9 858 aaKnown RBP21.81■■□□□ 1.08
CFAP46-206ENST00000475340 KIAA1551Q9HCM1 1747 aa21.8■■□□□ 1.08
CFAP46-206ENST00000475340 ADAMTS7Q9UKP4 1686 aa21.8■■□□□ 1.08
CFAP46-206ENST00000475340 UBR2Q8IWV8 1755 aa21.79■■□□□ 1.08
CFAP46-206ENST00000475340 PER1O15534 1290 aaPredicted RBP21.79■■□□□ 1.08
CFAP46-206ENST00000475340 GRIN3BO60391 1043 aa21.79■■□□□ 1.08
CFAP46-206ENST00000475340 YBX3P16989 372 aaKnown RBP eCLIP21.79■■□□□ 1.08
CFAP46-206ENST00000475340 RTCBQ9Y3I0 505 aaKnown RBP21.79■■□□□ 1.08
CFAP46-206ENST00000475340 SIPA1L3O60292 1781 aaPredicted RBP21.78■■□□□ 1.08
CFAP46-206ENST00000475340 TRAPPC3LQ5T215 181 aa21.77■■□□□ 1.08
CFAP46-206ENST00000475340 NFATC2IPQ8NCF5 419 aa21.77■■□□□ 1.08
CFAP46-206ENST00000475340 SLC4A9Q96Q91 983 aa21.77■■□□□ 1.08
CFAP46-206ENST00000475340 CNTNAP4Q9C0A0 1308 aa21.77■■□□□ 1.07
CFAP46-206ENST00000475340 AKAP4Q5JQC9 854 aa21.76■■□□□ 1.07
CFAP46-206ENST00000475340 MRC1P22897 1456 aa21.76■■□□□ 1.07
CFAP46-206ENST00000475340 DIAPH1O60610 1272 aaKnown RBP21.75■■□□□ 1.07
CFAP46-206ENST00000475340 PTCD1O75127 700 aaKnown RBP21.75■■□□□ 1.07
CFAP46-206ENST00000475340 HMOX1P09601 288 aa21.75■■□□□ 1.07
CFAP46-206ENST00000475340 RC3H1Q5TC82 1133 aaKnown RBP21.75■■□□□ 1.07
CFAP46-206ENST00000475340 ARFGEF1Q9Y6D6 1849 aa21.75■■□□□ 1.07
CFAP46-206ENST00000475340 NPC1L1Q9UHC9 1359 aa21.74■■□□□ 1.07
CFAP46-206ENST00000475340 ZNF219Q9P2Y4 722 aaPredicted RBP21.74■■□□□ 1.07
CFAP46-206ENST00000475340 AFDNP55196 1824 aaKnown RBP21.73■■□□□ 1.07
CFAP46-206ENST00000475340 CNGB1Q14028 1251 aaPredicted RBP21.73■■□□□ 1.07
CFAP46-206ENST00000475340 COL3A1P02461 1466 aaPredicted RBP21.72■■□□□ 1.07
CFAP46-206ENST00000475340 MMP10P09238 476 aa21.72■■□□□ 1.07
CFAP46-206ENST00000475340 RFC4P35249 363 aa21.72■■□□□ 1.07
CFAP46-206ENST00000475340 RPS6KA4O75676 772 aa21.71■■□□□ 1.07
CFAP46-206ENST00000475340 ARHGEF1Q92888 912 aaKnown RBP21.71■■□□□ 1.07
CFAP46-206ENST00000475340 NLGN1Q8N2Q7 840 aa21.7■■□□□ 1.06
CFAP46-206ENST00000475340 SLC52A2Q9HAB3 445 aa21.7■■□□□ 1.06
CFAP46-206ENST00000475340 ABCB7O75027 752 aa21.69■■□□□ 1.06
CFAP46-206ENST00000475340 CRKLP46109 303 aaKnown RBP21.69■■□□□ 1.06
CFAP46-206ENST00000475340 LGR6Q9HBX8 967 aa21.68■■□□□ 1.06
CFAP46-206ENST00000475340 KCPQ6ZWJ8 1503 aa21.67■■□□□ 1.06
CFAP46-206ENST00000475340 RNMTO43148 476 aaKnown RBP21.67■■□□□ 1.06
CFAP46-206ENST00000475340 MTHFSDQ2M296 383 aaKnown RBP21.67■■□□□ 1.06
CFAP46-206ENST00000475340 WWC3Q9ULE0 1092 aa21.67■■□□□ 1.06
CFAP46-206ENST00000475340 DLG5Q8TDM6 1919 aa21.67■■□□□ 1.06
CFAP46-206ENST00000475340 U2SURPO15042 1029 aaKnown RBP21.66■■□□□ 1.06
CFAP46-206ENST00000475340 GYS1P13807 737 aa21.66■■□□□ 1.06
CFAP46-206ENST00000475340 PXDNLA1KZ92 1463 aa21.65■■□□□ 1.06
CFAP46-206ENST00000475340 C10orf71Q711Q0 1435 aa21.65■■□□□ 1.06
CFAP46-206ENST00000475340 SAMD1Q6SPF0 538 aaPredicted RBP21.65■■□□□ 1.06
CFAP46-206ENST00000475340 GIGYF1O75420 1035 aaPredicted RBP21.64■■□□□ 1.05
CFAP46-206ENST00000475340 CCDC87Q9NVE4 849 aa21.64■■□□□ 1.05
CFAP46-206ENST00000475340 PARP3Q9Y6F1 533 aa21.64■■□□□ 1.05
CFAP46-206ENST00000475340 SBF1O95248 1867 aa21.64■■□□□ 1.05
CFAP46-206ENST00000475340 CCDC88AQ3V6T2 1871 aa21.64■■□□□ 1.05
CFAP46-206ENST00000475340 DLEC1Q9Y238 1755 aa21.64■■□□□ 1.05
CFAP46-206ENST00000475340 SLC39A6Q13433 755 aa21.63■■□□□ 1.05
CFAP46-206ENST00000475340 ATP10DQ9P241 1426 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms