RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 CC2D1BQ5T0F9 858 aaKnown RBP12.83□□□□□ -0.36
PDPN-204ENST00000475043 CCNL1Q9UK58 526 aaPredicted RBP12.82□□□□□ -0.36
PDPN-204ENST00000475043 IGSF1Q8N6C5 1336 aa12.82□□□□□ -0.36
PDPN-204ENST00000475043 ZNF827Q17R98 1081 aa12.81□□□□□ -0.36
PDPN-204ENST00000475043 IFNL2Q8IZJ0 200 aa12.81□□□□□ -0.36
PDPN-204ENST00000475043 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.81□□□□□ -0.36
PDPN-204ENST00000475043 PER1O15534 1290 aaPredicted RBP12.8□□□□□ -0.36
PDPN-204ENST00000475043 TFCP2L1Q9NZI6 479 aa12.8□□□□□ -0.36
PDPN-204ENST00000475043 TUBGCP6Q96RT7 1819 aa12.8□□□□□ -0.36
PDPN-204ENST00000475043 C5P01031 1676 aa12.8□□□□□ -0.36
PDPN-204ENST00000475043 QSER1Q2KHR3 1735 aa12.79□□□□□ -0.36
PDPN-204ENST00000475043 PHKG2P15735 406 aa12.79□□□□□ -0.36
PDPN-204ENST00000475043 MTHFSP49914 203 aa12.79□□□□□ -0.36
PDPN-204ENST00000475043 NKX1-1Q15270 411 aaPredicted RBP12.79□□□□□ -0.36
PDPN-204ENST00000475043 MTFR1LQ9H019 292 aa12.79□□□□□ -0.36
PDPN-204ENST00000475043 PALLDQ8WX93 1383 aa12.79□□□□□ -0.36
PDPN-204ENST00000475043 MNX1P50219 401 aaPredicted RBP12.78□□□□□ -0.36
PDPN-204ENST00000475043 PLEKHO1Q53GL0 409 aaPredicted RBP12.78□□□□□ -0.36
PDPN-204ENST00000475043 SULT6B1Q6IMI4 303 aa12.78□□□□□ -0.36
PDPN-204ENST00000475043 AEBP1Q8IUX7 1158 aa12.78□□□□□ -0.36
PDPN-204ENST00000475043 TMOD3Q9NYL9 352 aa12.78□□□□□ -0.36
PDPN-204ENST00000475043 TAF1LQ8IZX4 1826 aa12.78□□□□□ -0.36
PDPN-204ENST00000475043 PIGBQ92521 554 aa12.77□□□□□ -0.37
PDPN-204ENST00000475043 SMARCC1Q92922 1105 aaPredicted RBP12.77□□□□□ -0.37
PDPN-204ENST00000475043 IL13P35225 146 aa12.76□□□□□ -0.37
PDPN-204ENST00000475043 PTGER2P43116 358 aa12.76□□□□□ -0.37
PDPN-204ENST00000475043 AMOTQ4VCS5 1084 aa12.76□□□□□ -0.37
PDPN-204ENST00000475043 ZNF530Q6P9A1 599 aaPredicted RBP12.76□□□□□ -0.37
PDPN-204ENST00000475043 PLEKHG2Q9H7P9 1386 aa12.76□□□□□ -0.37
PDPN-204ENST00000475043 HSP90AB1P08238 724 aaKnown RBP12.75□□□□□ -0.37
PDPN-204ENST00000475043 CLCN6P51797 869 aa12.75□□□□□ -0.37
PDPN-204ENST00000475043 C1orf141Q5JVX7 400 aa12.75□□□□□ -0.37
PDPN-204ENST00000475043 PNPLA7Q6ZV29 1317 aa12.75□□□□□ -0.37
PDPN-204ENST00000475043 NPC1L1Q9UHC9 1359 aa12.74□□□□□ -0.37
PDPN-204ENST00000475043 DIAPH1O60610 1272 aaKnown RBP12.74□□□□□ -0.37
PDPN-204ENST00000475043 HMGB2P26583 209 aaKnown RBP12.74□□□□□ -0.37
PDPN-204ENST00000475043 ZNF579Q8NAF0 562 aaKnown RBP12.74□□□□□ -0.37
PDPN-204ENST00000475043 SLC16A10Q8TF71 515 aa12.74□□□□□ -0.37
PDPN-204ENST00000475043 DCAF5Q96JK2 942 aa12.74□□□□□ -0.37
PDPN-204ENST00000475043 ASAP1Q9ULH1 1129 aa12.74□□□□□ -0.37
PDPN-204ENST00000475043 C4BP0C0L5 1744 aa12.74□□□□□ -0.37
PDPN-204ENST00000475043 KDRP35968 1356 aa12.73□□□□□ -0.37
PDPN-204ENST00000475043 HMOX1P09601 288 aa12.73□□□□□ -0.37
PDPN-204ENST00000475043 ARXQ96QS3 562 aa12.73□□□□□ -0.37
PDPN-204ENST00000475043 ERVV-2B6SEH9 535 aa12.72□□□□□ -0.37
PDPN-204ENST00000475043 AK7Q96M32 723 aa12.72□□□□□ -0.37
PDPN-204ENST00000475043 SGIP1Q9BQI5 828 aa12.72□□□□□ -0.37
PDPN-204ENST00000475043 FHDC1Q9C0D6 1143 aaPredicted RBP12.72□□□□□ -0.37
PDPN-204ENST00000475043 LOC102724428A0A0B4J2F2 783 aa12.71□□□□□ -0.37
PDPN-204ENST00000475043 POLD1P28340 1107 aa12.71□□□□□ -0.37
PDPN-204ENST00000475043 ATP6V1AP38606 617 aa12.71□□□□□ -0.37
PDPN-204ENST00000475043 SIK1P57059 783 aa12.71□□□□□ -0.37
PDPN-204ENST00000475043 CABP4P57796 275 aa12.71□□□□□ -0.37
PDPN-204ENST00000475043 COL23A1Q86Y22 540 aaPredicted RBP12.71□□□□□ -0.37
PDPN-204ENST00000475043 KLHL34Q8N239 644 aa12.71□□□□□ -0.37
PDPN-204ENST00000475043 ATG3Q9NT62 314 aa12.71□□□□□ -0.37
PDPN-204ENST00000475043 VIRMAQ69YN4 1812 aaKnown RBP12.71□□□□□ -0.38
PDPN-204ENST00000475043 SCN11AQ9UI33 1791 aa12.71□□□□□ -0.38
PDPN-204ENST00000475043 KDM6AO15550 1401 aaPredicted RBP12.71□□□□□ -0.38
PDPN-204ENST00000475043 U2SURPO15042 1029 aaKnown RBP12.7□□□□□ -0.38
PDPN-204ENST00000475043 COL24A1Q17RW2 1714 aa12.7□□□□□ -0.38
PDPN-204ENST00000475043 UBR3Q6ZT12 1888 aa12.7□□□□□ -0.38
PDPN-204ENST00000475043 PHF14O94880 888 aa12.69□□□□□ -0.38
PDPN-204ENST00000475043 MSL1Q68DK7 614 aa12.69□□□□□ -0.38
PDPN-204ENST00000475043 FLAD1Q8NFF5 587 aa12.69□□□□□ -0.38
PDPN-204ENST00000475043 SYT17Q9BSW7 474 aa12.69□□□□□ -0.38
PDPN-204ENST00000475043 COL3A1P02461 1466 aaPredicted RBP12.68□□□□□ -0.38
PDPN-204ENST00000475043 ITPK1Q13572 414 aa12.68□□□□□ -0.38
PDPN-204ENST00000475043 FKBP8Q14318 412 aa12.68□□□□□ -0.38
PDPN-204ENST00000475043 AKAP4Q5JQC9 854 aa12.68□□□□□ -0.38
PDPN-204ENST00000475043 NFATC2IPQ8NCF5 419 aa12.68□□□□□ -0.38
PDPN-204ENST00000475043 LINC00116Q8NCU8 138 aa12.68□□□□□ -0.38
PDPN-204ENST00000475043 CFAP53Q96M91 514 aa12.68□□□□□ -0.38
PDPN-204ENST00000475043 SMIM5Q71RC9 77 aa12.67□□□□□ -0.38
PDPN-204ENST00000475043 ZNF831Q5JPB2 1677 aa12.67□□□□□ -0.38
PDPN-204ENST00000475043 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.66□□□□□ -0.38
PDPN-204ENST00000475043 GNPATO15228 680 aa12.66□□□□□ -0.38
PDPN-204ENST00000475043 PTCD1O75127 700 aaKnown RBP12.66□□□□□ -0.38
PDPN-204ENST00000475043 MTHFSDQ2M296 383 aaKnown RBP12.66□□□□□ -0.38
PDPN-204ENST00000475043 COL5A3P25940 1745 aaPredicted RBP12.65□□□□□ -0.38
PDPN-204ENST00000475043 SSFA2P28290 1259 aa12.65□□□□□ -0.38
PDPN-204ENST00000475043 PPP2R1AP30153 589 aa12.65□□□□□ -0.38
PDPN-204ENST00000475043 AMIGO3Q86WK7 504 aa12.65□□□□□ -0.38
PDPN-204ENST00000475043 LGR6Q9HBX8 967 aa12.65□□□□□ -0.38
PDPN-204ENST00000475043 SLC4A9Q96Q91 983 aa12.64□□□□□ -0.39
PDPN-204ENST00000475043 SLC52A2Q9HAB3 445 aa12.64□□□□□ -0.39
PDPN-204ENST00000475043 NUDCQ9Y266 331 aa12.64□□□□□ -0.39
PDPN-204ENST00000475043 MAP3K5Q99683 1374 aa12.64□□□□□ -0.39
PDPN-204ENST00000475043 RNMTO43148 476 aaKnown RBP12.63□□□□□ -0.39
PDPN-204ENST00000475043 RTCBQ9Y3I0 505 aaKnown RBP12.63□□□□□ -0.39
PDPN-204ENST00000475043 POTEIP0CG38 1075 aa12.62□□□□□ -0.39
PDPN-204ENST00000475043 YY1P25490 414 aa12.62□□□□□ -0.39
PDPN-204ENST00000475043 PELP1Q8IZL8 1130 aaKnown RBP12.62□□□□□ -0.39
PDPN-204ENST00000475043 TJP1Q07157 1748 aa12.62□□□□□ -0.39
PDPN-204ENST00000475043 ADAMTS7Q9UKP4 1686 aa12.61□□□□□ -0.39
PDPN-204ENST00000475043 MRC1P22897 1456 aa12.61□□□□□ -0.39
PDPN-204ENST00000475043 U2AF1L5P0DN76 240 aaPredicted RBP12.61□□□□□ -0.39
PDPN-204ENST00000475043 PRKAR2BP31323 418 aa12.61□□□□□ -0.39
PDPN-204ENST00000475043 U2AF1Q01081 240 aaKnown RBP eCLIP12.61□□□□□ -0.39
PDPN-204ENST00000475043 SLC39A6Q13433 755 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms