RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 C7P10643 843 aa12.55□□□□□ -0.4
DDX39B-217ENST00000474961 USP21Q9UK80 565 aa12.55□□□□□ -0.4
DDX39B-217ENST00000474961 AFF2P51816 1311 aa12.55□□□□□ -0.4
DDX39B-217ENST00000474961 PARP4Q9UKK3 1724 aaKnown RBP12.54□□□□□ -0.4
DDX39B-217ENST00000474961 TATP17735 454 aaPredicted RBP12.54□□□□□ -0.4
DDX39B-217ENST00000474961 TMPOP42166 694 aaKnown RBP12.54□□□□□ -0.4
DDX39B-217ENST00000474961 RAPGEF4Q8WZA2 1011 aa12.54□□□□□ -0.4
DDX39B-217ENST00000474961 USP35Q9P2H5 1018 aa12.54□□□□□ -0.4
DDX39B-217ENST00000474961 RRP7AQ9Y3A4 280 aaKnown RBP12.54□□□□□ -0.4
DDX39B-217ENST00000474961 SALL2Q9Y467 1007 aaPredicted RBP12.54□□□□□ -0.4
DDX39B-217ENST00000474961 MEGF6O75095 1541 aa12.53□□□□□ -0.4
DDX39B-217ENST00000474961 NEUROD2Q15784 382 aa12.53□□□□□ -0.4
DDX39B-217ENST00000474961 VPS72Q15906 364 aa12.53□□□□□ -0.4
DDX39B-217ENST00000474961 NFE2L2Q16236 605 aa12.53□□□□□ -0.4
DDX39B-217ENST00000474961 CCDC9Q9Y3X0 531 aaKnown RBP12.53□□□□□ -0.4
DDX39B-217ENST00000474961 STK24Q9Y6E0 443 aa12.53□□□□□ -0.4
DDX39B-217ENST00000474961 SPATA31A1Q5TZJ5 1347 aa12.53□□□□□ -0.4
DDX39B-217ENST00000474961 SPATA31A5Q5VU36 1347 aa12.53□□□□□ -0.4
DDX39B-217ENST00000474961 SPATA31A7Q8IWB4 1347 aa12.53□□□□□ -0.4
DDX39B-217ENST00000474961 VIRMAQ69YN4 1812 aaKnown RBP12.53□□□□□ -0.4
DDX39B-217ENST00000474961 PKD1L3Q7Z443 1732 aa12.52□□□□□ -0.41
DDX39B-217ENST00000474961 IL2RBP14784 551 aa12.52□□□□□ -0.41
DDX39B-217ENST00000474961 MTHFSDQ2M296 383 aaKnown RBP12.52□□□□□ -0.41
DDX39B-217ENST00000474961 PLEKHO1Q53GL0 409 aaPredicted RBP12.52□□□□□ -0.41
DDX39B-217ENST00000474961 IER5LQ5T953 404 aa12.52□□□□□ -0.41
DDX39B-217ENST00000474961 PELP1Q8IZL8 1130 aaKnown RBP12.52□□□□□ -0.41
DDX39B-217ENST00000474961 BCL11BQ9C0K0 894 aaPredicted RBP12.52□□□□□ -0.41
DDX39B-217ENST00000474961 RIPK4P57078 832 aa12.51□□□□□ -0.41
DDX39B-217ENST00000474961 NGEFQ8N5V2 710 aa12.51□□□□□ -0.41
DDX39B-217ENST00000474961 GAS2L2Q8NHY3 880 aa12.51□□□□□ -0.41
DDX39B-217ENST00000474961 THRAP3Q9Y2W1 955 aaKnown RBP12.51□□□□□ -0.41
DDX39B-217ENST00000474961 OVOS2A0A0G2JMS6 1433 aa12.51□□□□□ -0.41
DDX39B-217ENST00000474961 SEC24BO95487 1268 aa12.5□□□□□ -0.41
DDX39B-217ENST00000474961 AMOTQ4VCS5 1084 aa12.5□□□□□ -0.41
DDX39B-217ENST00000474961 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.5□□□□□ -0.413e-20■□□□□ 9.1
DDX39B-217ENST00000474961 ZBED9Q6R2W3 1325 aa12.5□□□□□ -0.41
DDX39B-217ENST00000474961 PLEKHG2Q9H7P9 1386 aa12.5□□□□□ -0.41
DDX39B-217ENST00000474961 DISP2A7MBM2 1401 aa12.5□□□□□ -0.41
DDX39B-217ENST00000474961 ATRNO75882 1429 aa12.5□□□□□ -0.41
DDX39B-217ENST00000474961 SHANK3Q9BYB0 1731 aa12.5□□□□□ -0.41
DDX39B-217ENST00000474961 CCDC27Q2M243 656 aa12.49□□□□□ -0.41
DDX39B-217ENST00000474961 ZNF530Q6P9A1 599 aaPredicted RBP12.49□□□□□ -0.41
DDX39B-217ENST00000474961 TRPC5Q9UL62 973 aaPredicted RBP12.49□□□□□ -0.41
DDX39B-217ENST00000474961 SPG7Q9UQ90 795 aa12.49□□□□□ -0.41
DDX39B-217ENST00000474961 GLI3P10071 1580 aa12.48□□□□□ -0.41
DDX39B-217ENST00000474961 BARGINQ6ZT62 677 aa12.48□□□□□ -0.41
DDX39B-217ENST00000474961 WWC1Q8IX03 1113 aa12.48□□□□□ -0.41
DDX39B-217ENST00000474961 ZCRB1Q8TBF4 217 aaKnown RBP12.48□□□□□ -0.41
DDX39B-217ENST00000474961 QTRT2Q9H974 415 aaKnown RBP12.48□□□□□ -0.41
DDX39B-217ENST00000474961 METRNQ9UJH8 293 aa12.48□□□□□ -0.41
DDX39B-217ENST00000474961 ZNF521Q96K83 1311 aa12.47□□□□□ -0.41
DDX39B-217ENST00000474961 LMOD3Q0VAK6 560 aa12.47□□□□□ -0.41
DDX39B-217ENST00000474961 GJD4Q96KN9 370 aaPredicted RBP12.47□□□□□ -0.41
DDX39B-217ENST00000474961 CDCA7Q9BWT1 371 aaPredicted RBP12.47□□□□□ -0.41
DDX39B-217ENST00000474961 SCN11AQ9UI33 1791 aa12.46□□□□□ -0.41
DDX39B-217ENST00000474961 MAP3K5Q99683 1374 aa12.46□□□□□ -0.41
DDX39B-217ENST00000474961 GNAT3A8MTJ3 354 aa12.46□□□□□ -0.41
DDX39B-217ENST00000474961 FAM98CQ17RN3 349 aaKnown RBP12.46□□□□□ -0.41
DDX39B-217ENST00000474961 AKAP4Q5JQC9 854 aa12.46□□□□□ -0.41
DDX39B-217ENST00000474961 C1orf141Q5JVX7 400 aa12.46□□□□□ -0.41
DDX39B-217ENST00000474961 ZNF772Q68DY9 489 aaPredicted RBP12.46□□□□□ -0.41
DDX39B-217ENST00000474961 LRRC37A3O60309 1634 aa12.45□□□□□ -0.42
DDX39B-217ENST00000474961 CYP27B1O15528 508 aa12.45□□□□□ -0.42
DDX39B-217ENST00000474961 HTATSF1O43719 755 aaKnown RBP12.45□□□□□ -0.42
DDX39B-217ENST00000474961 PHKG2P15735 406 aa12.45□□□□□ -0.42
DDX39B-217ENST00000474961 DCTN1Q14203 1278 aa12.45□□□□□ -0.42
DDX39B-217ENST00000474961 WDR63Q8IWG1 891 aa12.45□□□□□ -0.42
DDX39B-217ENST00000474961 IFNL2Q8IZJ0 200 aa12.45□□□□□ -0.42
DDX39B-217ENST00000474961 HS6ST3Q8IZP7 471 aa12.45□□□□□ -0.42
DDX39B-217ENST00000474961 RTF1Q92541 710 aaKnown RBP12.45□□□□□ -0.42
DDX39B-217ENST00000474961 THUMPD2Q9BTF0 503 aaKnown RBP12.45□□□□□ -0.42
DDX39B-217ENST00000474961 THSD7AQ9UPZ6 1657 aa12.45□□□□□ -0.42
DDX39B-217ENST00000474961 KAT6BQ8WYB5 2073 aa12.44□□□□□ -0.42
DDX39B-217ENST00000474961 PCDH11XQ9BZA7 1347 aa12.44□□□□□ -0.42
DDX39B-217ENST00000474961 PCDH11YQ9BZA8 1340 aa12.44□□□□□ -0.42
DDX39B-217ENST00000474961 EXOC5O00471 708 aa12.44□□□□□ -0.42
DDX39B-217ENST00000474961 PLCG2P16885 1265 aa12.44□□□□□ -0.42
DDX39B-217ENST00000474961 MCM10Q7L590 875 aa12.44□□□□□ -0.42
DDX39B-217ENST00000474961 DDX54Q8TDD1 881 aaKnown RBP12.44□□□□□ -0.42
DDX39B-217ENST00000474961 TNS2Q63HR2 1409 aa12.44□□□□□ -0.42
DDX39B-217ENST00000474961 ADAMTS7Q9UKP4 1686 aa12.43□□□□□ -0.42
DDX39B-217ENST00000474961 PDE3BQ13370 1112 aa12.43□□□□□ -0.42
DDX39B-217ENST00000474961 DDB1Q16531 1140 aa12.43□□□□□ -0.42
DDX39B-217ENST00000474961 MPRIPQ6WCQ1 1025 aa12.43□□□□□ -0.42
DDX39B-217ENST00000474961 EFCAB3Q8N7B9 438 aa12.43□□□□□ -0.42
DDX39B-217ENST00000474961 IL17REQ8NFR9 667 aa12.43□□□□□ -0.42
DDX39B-217ENST00000474961 LGR6Q9HBX8 967 aa12.43□□□□□ -0.42
DDX39B-217ENST00000474961 RNMTO43148 476 aaKnown RBP12.42□□□□□ -0.42
DDX39B-217ENST00000474961 ONECUT3O60422 494 aaPredicted RBP12.42□□□□□ -0.42
DDX39B-217ENST00000474961 HSP90AB1P08238 724 aaKnown RBP12.42□□□□□ -0.42
DDX39B-217ENST00000474961 CDCA7LQ96GN5 454 aa12.42□□□□□ -0.42
DDX39B-217ENST00000474961 OCEL1Q9H607 264 aa12.42□□□□□ -0.42
DDX39B-217ENST00000474961 RGS17Q9UGC6 210 aaPredicted RBP12.42□□□□□ -0.42
DDX39B-217ENST00000474961 IL16Q14005 1332 aa12.41□□□□□ -0.42
DDX39B-217ENST00000474961 SIPA1L3O60292 1781 aaPredicted RBP12.41□□□□□ -0.42
DDX39B-217ENST00000474961 A0A0G2JS52 829 aa12.41□□□□□ -0.42
DDX39B-217ENST00000474961 KDM6AO15550 1401 aaPredicted RBP12.41□□□□□ -0.42
DDX39B-217ENST00000474961 RBM6P78332 1123 aaKnown RBP12.41□□□□□ -0.42
DDX39B-217ENST00000474961 MYT1Q01538 1121 aa12.41□□□□□ -0.42
DDX39B-217ENST00000474961 CALD1Q05682 793 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms