RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 PHLPP1O60346 1717 aa8.64□□□□□ -1.03
ATG4A-207ENST00000474825 FAM205CA6NFA0 338 aa8.64□□□□□ -1.03
ATG4A-207ENST00000474825 CT47B1P0C2W7 299 aaPredicted RBP8.64□□□□□ -1.03
ATG4A-207ENST00000474825 CALD1Q05682 793 aaKnown RBP8.64□□□□□ -1.03
ATG4A-207ENST00000474825 NEUROD2Q15784 382 aa8.64□□□□□ -1.03
ATG4A-207ENST00000474825 MTHFSDQ2M296 383 aaKnown RBP8.64□□□□□ -1.03
ATG4A-207ENST00000474825 MEX3CQ5U5Q3 659 aaKnown RBP8.64□□□□□ -1.03
ATG4A-207ENST00000474825 ERICH6BQ5W0A0 696 aa8.64□□□□□ -1.03
ATG4A-207ENST00000474825 RCAN3Q9UKA8 241 aa8.64□□□□□ -1.03
ATG4A-207ENST00000474825 SUPT16HQ9Y5B9 1047 aaKnown RBP8.64□□□□□ -1.03
ATG4A-207ENST00000474825 GTF3C3Q9Y5Q9 886 aa8.64□□□□□ -1.03
ATG4A-207ENST00000474825 ABCA3Q99758 1704 aa8.63□□□□□ -1.03
ATG4A-207ENST00000474825 DCAF8Q5TAQ9 597 aa8.63□□□□□ -1.03
ATG4A-207ENST00000474825 MYH16Q9H6N6 1097 aa8.63□□□□□ -1.03
ATG4A-207ENST00000474825 IFT57Q9NWB7 429 aa8.63□□□□□ -1.03
ATG4A-207ENST00000474825 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.63□□□□□ -1.03
ATG4A-207ENST00000474825 RGS17Q9UGC6 210 aaPredicted RBP8.63□□□□□ -1.03
ATG4A-207ENST00000474825 WDR17Q8IZU2 1322 aa8.62□□□□□ -1.03
ATG4A-207ENST00000474825 FAM83GA6ND36 823 aa8.62□□□□□ -1.03
ATG4A-207ENST00000474825 AMOTQ4VCS5 1084 aa8.62□□□□□ -1.03
ATG4A-207ENST00000474825 LTV1Q96GA3 475 aaPredicted RBP8.62□□□□□ -1.03
ATG4A-207ENST00000474825 CFAP44Q96MT7 982 aa8.62□□□□□ -1.03
ATG4A-207ENST00000474825 BABAM1Q9NWV8 329 aa8.62□□□□□ -1.03
ATG4A-207ENST00000474825 CRB1P82279 1406 aa8.62□□□□□ -1.03
ATG4A-207ENST00000474825 CEMIPQ8WUJ3 1361 aa8.61□□□□□ -1.03
ATG4A-207ENST00000474825 FANCIQ9NVI1 1328 aa8.61□□□□□ -1.03
ATG4A-207ENST00000474825 NUTM2BA6NNL0 878 aaPredicted RBP8.61□□□□□ -1.03
ATG4A-207ENST00000474825 NUTM2EB1AL46 878 aaPredicted RBP8.61□□□□□ -1.03
ATG4A-207ENST00000474825 CHL1O00533 1208 aa8.61□□□□□ -1.03
ATG4A-207ENST00000474825 GNAI1P63096 354 aa8.61□□□□□ -1.03
ATG4A-207ENST00000474825 CHRNA2Q15822 529 aa8.61□□□□□ -1.03
ATG4A-207ENST00000474825 ZNF772Q68DY9 489 aaPredicted RBP8.61□□□□□ -1.03
ATG4A-207ENST00000474825 POTEAQ6S8J7 498 aa8.61□□□□□ -1.03
ATG4A-207ENST00000474825 NUTM2AQ8IVF1 878 aaPredicted RBP8.61□□□□□ -1.03
ATG4A-207ENST00000474825 COL5A2P05997 1499 aaPredicted RBP8.61□□□□□ -1.03
ATG4A-207ENST00000474825 FAM208AQ9UK61 1670 aaKnown RBP8.61□□□□□ -1.03
ATG4A-207ENST00000474825 GNAT3A8MTJ3 354 aa8.6□□□□□ -1.03
ATG4A-207ENST00000474825 BRPF1P55201 1214 aaPredicted RBP8.6□□□□□ -1.03
ATG4A-207ENST00000474825 MKRN3Q13064 507 aaKnown RBP8.6□□□□□ -1.03
ATG4A-207ENST00000474825 PLEKHO1Q53GL0 409 aaPredicted RBP8.6□□□□□ -1.03
ATG4A-207ENST00000474825 ZNF428Q96B54 188 aa8.6□□□□□ -1.03
ATG4A-207ENST00000474825 CARD10Q9BWT7 1032 aa8.6□□□□□ -1.03
ATG4A-207ENST00000474825 PRDM11Q9NQV5 511 aa8.6□□□□□ -1.03
ATG4A-207ENST00000474825 OVOS2A0A0G2JMS6 1433 aa8.6□□□□□ -1.03
ATG4A-207ENST00000474825 MAP3K5Q99683 1374 aa8.6□□□□□ -1.03
ATG4A-207ENST00000474825 RRP1P56182 461 aaKnown RBP8.59□□□□□ -1.03
ATG4A-207ENST00000474825 AKAP4Q5JQC9 854 aa8.59□□□□□ -1.03
ATG4A-207ENST00000474825 ZNF467Q7Z7K2 595 aaPredicted RBP8.59□□□□□ -1.03
ATG4A-207ENST00000474825 USHBP1Q8N6Y0 703 aa8.59□□□□□ -1.03
ATG4A-207ENST00000474825 IL17REQ8NFR9 667 aa8.59□□□□□ -1.03
ATG4A-207ENST00000474825 LRRC37A3O60309 1634 aa8.58□□□□□ -1.04
ATG4A-207ENST00000474825 ZBTB7CA1YPR0 619 aa8.58□□□□□ -1.04
ATG4A-207ENST00000474825 RARSP54136 660 aaKnown RBP8.58□□□□□ -1.04
ATG4A-207ENST00000474825 THUMPD2Q9BTF0 503 aaKnown RBP8.58□□□□□ -1.04
ATG4A-207ENST00000474825 ADAMTS7Q9UKP4 1686 aa8.58□□□□□ -1.04
ATG4A-207ENST00000474825 COL14A1Q05707 1796 aaKnown RBP8.58□□□□□ -1.04
ATG4A-207ENST00000474825 DLG5Q8TDM6 1919 aa8.57□□□□□ -1.04
ATG4A-207ENST00000474825 RXRBP28702 533 aa8.57□□□□□ -1.04
ATG4A-207ENST00000474825 EXOSC9Q06265 439 aaKnown RBP8.57□□□□□ -1.04
ATG4A-207ENST00000474825 DCTN1Q14203 1278 aa8.57□□□□□ -1.04
ATG4A-207ENST00000474825 MCM10Q7L590 875 aa8.57□□□□□ -1.04
ATG4A-207ENST00000474825 RAPGEF4Q8WZA2 1011 aa8.57□□□□□ -1.04
ATG4A-207ENST00000474825 RTF1Q92541 710 aaKnown RBP8.57□□□□□ -1.04
ATG4A-207ENST00000474825 TSR2Q969E8 191 aaKnown RBP8.57□□□□□ -1.04
ATG4A-207ENST00000474825 MBIPQ9NS73 344 aa8.57□□□□□ -1.04
ATG4A-207ENST00000474825 NLRP2Q9NX02 1062 aa8.57□□□□□ -1.04
ATG4A-207ENST00000474825 MEGF6O75095 1541 aa8.57□□□□□ -1.04
ATG4A-207ENST00000474825 RGPD2P0DJD1 1756 aa8.57□□□□□ -1.04
ATG4A-207ENST00000474825 RGPD5Q99666 1765 aa8.57□□□□□ -1.04
ATG4A-207ENST00000474825 SOS1Q07889 1333 aaPredicted RBP8.56□□□□□ -1.04
ATG4A-207ENST00000474825 DISP2A7MBM2 1401 aa8.56□□□□□ -1.04
ATG4A-207ENST00000474825 SLIT2O94813 1529 aa8.56□□□□□ -1.04
ATG4A-207ENST00000474825 VAMP4O75379 141 aa8.56□□□□□ -1.04
ATG4A-207ENST00000474825 NEFLP07196 543 aa8.56□□□□□ -1.04
ATG4A-207ENST00000474825 TATP17735 454 aaPredicted RBP8.56□□□□□ -1.04
ATG4A-207ENST00000474825 HAP1P54257 671 aaPredicted RBP8.56□□□□□ -1.04
ATG4A-207ENST00000474825 FKBP8Q14318 412 aa8.56□□□□□ -1.04
ATG4A-207ENST00000474825 ALDH1L2Q3SY69 923 aa8.56□□□□□ -1.04
ATG4A-207ENST00000474825 SPG7Q9UQ90 795 aa8.56□□□□□ -1.04
ATG4A-207ENST00000474825 RNMTO43148 476 aaKnown RBP8.55□□□□□ -1.04
ATG4A-207ENST00000474825 CSB-PGBD3P0DP91 1061 aa8.55□□□□□ -1.04
ATG4A-207ENST00000474825 PHKG2P15735 406 aa8.55□□□□□ -1.04
ATG4A-207ENST00000474825 PDE3AQ14432 1141 aa8.55□□□□□ -1.04
ATG4A-207ENST00000474825 NKX1-1Q15270 411 aaPredicted RBP8.55□□□□□ -1.04
ATG4A-207ENST00000474825 TAF7Q15545 349 aaPredicted RBP8.55□□□□□ -1.04
ATG4A-207ENST00000474825 ZNF530Q6P9A1 599 aaPredicted RBP8.55□□□□□ -1.04
ATG4A-207ENST00000474825 LARP1Q6PKG0 1096 aaKnown RBP8.55□□□□□ -1.04
ATG4A-207ENST00000474825 NGLY1Q96IV0 654 aa8.55□□□□□ -1.04
ATG4A-207ENST00000474825 BTG4Q9NY30 223 aa8.55□□□□□ -1.04
ATG4A-207ENST00000474825 PKD1L3Q7Z443 1732 aa8.54□□□□□ -1.04
ATG4A-207ENST00000474825 CYP27B1O15528 508 aa8.54□□□□□ -1.04
ATG4A-207ENST00000474825 BCAR3O75815 825 aa8.54□□□□□ -1.04
ATG4A-207ENST00000474825 IL2RBP14784 551 aa8.54□□□□□ -1.04
ATG4A-207ENST00000474825 TOM1L2Q6ZVM7 507 aa8.54□□□□□ -1.04
ATG4A-207ENST00000474825 IFNL2Q8IZJ0 200 aa8.54□□□□□ -1.04
ATG4A-207ENST00000474825 FNBP4Q8N3X1 1017 aaPredicted RBP8.54□□□□□ -1.04
ATG4A-207ENST00000474825 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.54□□□□□ -1.04
ATG4A-207ENST00000474825 C8orf58Q8NAV2 365 aa8.54□□□□□ -1.04
ATG4A-207ENST00000474825 C8orf37Q96NL8 207 aa8.54□□□□□ -1.04
ATG4A-207ENST00000474825 QTRT2Q9H974 415 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms