RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 RREB1Q92766 1687 aa5.46□□□□□ -1.54
GAPVD1-216ENST00000474637 BTAF1O14981 1849 aa5.46□□□□□ -1.54
GAPVD1-216ENST00000474637 WDR43Q15061 677 aaKnown RBP eCLIP5.46□□□□□ -1.54
GAPVD1-216ENST00000474637 CAMKK2Q96RR4 588 aa5.46□□□□□ -1.54
GAPVD1-216ENST00000474637 ITGB4P16144 1822 aa5.45□□□□□ -1.54
GAPVD1-216ENST00000474637 PRKAR2BP31323 418 aa5.45□□□□□ -1.54
GAPVD1-216ENST00000474637 PRIM1P49642 420 aaKnown RBP5.45□□□□□ -1.54
GAPVD1-216ENST00000474637 NBR1Q14596 966 aa5.45□□□□□ -1.54
GAPVD1-216ENST00000474637 SMARCC1Q92922 1105 aaPredicted RBP5.45□□□□□ -1.54
GAPVD1-216ENST00000474637 TOGARAM1Q9Y4F4 1720 aa5.45□□□□□ -1.54
GAPVD1-216ENST00000474637 SCN11AQ9UI33 1791 aa5.45□□□□□ -1.54
GAPVD1-216ENST00000474637 KCNQ2O43526 872 aa5.45□□□□□ -1.54
GAPVD1-216ENST00000474637 HTATSF1O43719 755 aaKnown RBP5.45□□□□□ -1.54
GAPVD1-216ENST00000474637 EN1Q05925 392 aaPredicted RBP5.45□□□□□ -1.54
GAPVD1-216ENST00000474637 MTHFSDQ2M296 383 aaKnown RBP5.45□□□□□ -1.54
GAPVD1-216ENST00000474637 DEFB132Q7Z7B7 95 aa5.45□□□□□ -1.54
GAPVD1-216ENST00000474637 SYTL4Q96C24 671 aaPredicted RBP5.45□□□□□ -1.54
GAPVD1-216ENST00000474637 CCDC136Q96JN2 1154 aa5.45□□□□□ -1.54
GAPVD1-216ENST00000474637 TMOD3Q9NYL9 352 aa5.45□□□□□ -1.54
GAPVD1-216ENST00000474637 MAPK8IP3Q9UPT6 1336 aa5.45□□□□□ -1.54
GAPVD1-216ENST00000474637 MAP3K5Q99683 1374 aa5.45□□□□□ -1.54
GAPVD1-216ENST00000474637 GNAT3A8MTJ3 354 aa5.44□□□□□ -1.54
GAPVD1-216ENST00000474637 EZH2Q15910 746 aaKnown RBP5.44□□□□□ -1.54
GAPVD1-216ENST00000474637 SLC27A3Q5K4L6 730 aa5.44□□□□□ -1.54
GAPVD1-216ENST00000474637 NBPF14Q5TI25 921 aa5.44□□□□□ -1.54
GAPVD1-216ENST00000474637 ADAMTS7Q9UKP4 1686 aa5.44□□□□□ -1.54
GAPVD1-216ENST00000474637 NUP188Q5SRE5 1749 aa5.44□□□□□ -1.54
GAPVD1-216ENST00000474637 KDM6AO15550 1401 aaPredicted RBP5.44□□□□□ -1.54
GAPVD1-216ENST00000474637 MRC1P22897 1456 aa5.44□□□□□ -1.54
GAPVD1-216ENST00000474637 RNMTO43148 476 aaKnown RBP5.44□□□□□ -1.54
GAPVD1-216ENST00000474637 CABP4P57796 275 aa5.44□□□□□ -1.54
GAPVD1-216ENST00000474637 LY75O60449 1722 aa5.44□□□□□ -1.54
GAPVD1-216ENST00000474637 VIRMAQ69YN4 1812 aaKnown RBP5.44□□□□□ -1.54
GAPVD1-216ENST00000474637 MPRIPQ6WCQ1 1025 aa5.43□□□□□ -1.54
GAPVD1-216ENST00000474637 PIGBQ92521 554 aa5.43□□□□□ -1.54
GAPVD1-216ENST00000474637 RTF1Q92541 710 aaKnown RBP5.43□□□□□ -1.54
GAPVD1-216ENST00000474637 RUNDC1Q96C34 613 aa5.43□□□□□ -1.54
GAPVD1-216ENST00000474637 PLEKHF1Q96S99 279 aa5.43□□□□□ -1.54
GAPVD1-216ENST00000474637 KAT6BQ8WYB5 2073 aa5.43□□□□□ -1.54
GAPVD1-216ENST00000474637 RNF123Q5XPI4 1314 aa5.43□□□□□ -1.54
GAPVD1-216ENST00000474637 LMOD3Q0VAK6 560 aa5.43□□□□□ -1.54
GAPVD1-216ENST00000474637 NFE2L2Q16236 605 aa5.43□□□□□ -1.54
GAPVD1-216ENST00000474637 TXNRD1Q16881 649 aa5.43□□□□□ -1.54
GAPVD1-216ENST00000474637 PTF1AQ7RTS3 328 aa5.43□□□□□ -1.54
GAPVD1-216ENST00000474637 PHACTR3Q96KR7 559 aa5.43□□□□□ -1.54
GAPVD1-216ENST00000474637 SLC52A2Q9HAB3 445 aa5.43□□□□□ -1.54
GAPVD1-216ENST00000474637 ATF5Q9Y2D1 282 aaPredicted RBP5.43□□□□□ -1.54
GAPVD1-216ENST00000474637 FANCIQ9NVI1 1328 aa5.43□□□□□ -1.54
GAPVD1-216ENST00000474637 ZNF831Q5JPB2 1677 aa5.43□□□□□ -1.54
GAPVD1-216ENST00000474637 PALLDQ8WX93 1383 aa5.42□□□□□ -1.54
GAPVD1-216ENST00000474637 TEFQ10587 303 aa5.42□□□□□ -1.54
GAPVD1-216ENST00000474637 RTN4Q9NQC3 1192 aaKnown RBP5.42□□□□□ -1.54
GAPVD1-216ENST00000474637 STK32BQ9NY57 414 aa5.42□□□□□ -1.54
GAPVD1-216ENST00000474637 CCNL1Q9UK58 526 aaPredicted RBP5.42□□□□□ -1.54
GAPVD1-216ENST00000474637 ADAMTS8Q9UP79 889 aa5.42□□□□□ -1.54
GAPVD1-216ENST00000474637 CEMIPQ8WUJ3 1361 aa5.42□□□□□ -1.54
GAPVD1-216ENST00000474637 PAPPAQ13219 1627 aa5.42□□□□□ -1.54
GAPVD1-216ENST00000474637 PROM2Q8N271 834 aa5.41□□□□□ -1.54
GAPVD1-216ENST00000474637 NFATC2IPQ8NCF5 419 aa5.41□□□□□ -1.54
GAPVD1-216ENST00000474637 CDCA7LQ96GN5 454 aa5.41□□□□□ -1.54
GAPVD1-216ENST00000474637 LGR6Q9HBX8 967 aa5.41□□□□□ -1.54
GAPVD1-216ENST00000474637 ATG3Q9NT62 314 aa5.41□□□□□ -1.54
GAPVD1-216ENST00000474637 SIPA1L3O60292 1781 aaPredicted RBP5.41□□□□□ -1.54
GAPVD1-216ENST00000474637 DLG5Q8TDM6 1919 aa5.41□□□□□ -1.54
GAPVD1-216ENST00000474637 C5P01031 1676 aa5.41□□□□□ -1.54
GAPVD1-216ENST00000474637 QSER1Q2KHR3 1735 aa5.41□□□□□ -1.54
GAPVD1-216ENST00000474637 CICQ96RK0 1608 aaPredicted RBP5.41□□□□□ -1.54
GAPVD1-216ENST00000474637 ATXN8OSP0DMR3 200 aa5.4□□□□□ -1.54
GAPVD1-216ENST00000474637 TMPOP42166 694 aaKnown RBP5.4□□□□□ -1.54
GAPVD1-216ENST00000474637 RIPK4P57078 832 aa5.4□□□□□ -1.54
GAPVD1-216ENST00000474637 TTC5Q8N0Z6 440 aa5.4□□□□□ -1.54
GAPVD1-216ENST00000474637 IL17REQ8NFR9 667 aa5.4□□□□□ -1.54
GAPVD1-216ENST00000474637 BABAM1Q9NWV8 329 aa5.4□□□□□ -1.54
GAPVD1-216ENST00000474637 RCAN3Q9UKA8 241 aa5.4□□□□□ -1.54
GAPVD1-216ENST00000474637 ASAP1Q9ULH1 1129 aa5.4□□□□□ -1.54
GAPVD1-216ENST00000474637 TAF1LQ8IZX4 1826 aa5.4□□□□□ -1.54
GAPVD1-216ENST00000474637 LOC102724428A0A0B4J2F2 783 aa5.4□□□□□ -1.55
GAPVD1-216ENST00000474637 SIK1P57059 783 aa5.4□□□□□ -1.55
GAPVD1-216ENST00000474637 TAF7Q15545 349 aaPredicted RBP5.4□□□□□ -1.55
GAPVD1-216ENST00000474637 SLC15A2Q16348 729 aa5.4□□□□□ -1.55
GAPVD1-216ENST00000474637 VSIG10Q8N0Z9 540 aa5.4□□□□□ -1.55
GAPVD1-216ENST00000474637 EXOC6Q8TAG9 804 aa5.4□□□□□ -1.55
GAPVD1-216ENST00000474637 RBM42Q9BTD8 480 aaKnown RBP5.4□□□□□ -1.55
GAPVD1-216ENST00000474637 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.4□□□□□ -1.55
GAPVD1-216ENST00000474637 EP400Q96L91 3159 aa5.39□□□□□ -1.55
GAPVD1-216ENST00000474637 UBR2Q8IWV8 1755 aa5.39□□□□□ -1.55
GAPVD1-216ENST00000474637 BTBD11A6QL63 1104 aa5.39□□□□□ -1.55
GAPVD1-216ENST00000474637 ATP6V1AP38606 617 aa5.39□□□□□ -1.55
GAPVD1-216ENST00000474637 RRP1P56182 461 aaKnown RBP5.39□□□□□ -1.55
GAPVD1-216ENST00000474637 CALD1Q05682 793 aaKnown RBP5.39□□□□□ -1.55
GAPVD1-216ENST00000474637 MCM10Q7L590 875 aa5.39□□□□□ -1.55
GAPVD1-216ENST00000474637 CCDC146Q8IYE0 955 aa5.39□□□□□ -1.55
GAPVD1-216ENST00000474637 NGEFQ8N5V2 710 aa5.39□□□□□ -1.55
GAPVD1-216ENST00000474637 FLAD1Q8NFF5 587 aa5.39□□□□□ -1.55
GAPVD1-216ENST00000474637 AKT1S1Q96B36 256 aa5.39□□□□□ -1.55
GAPVD1-216ENST00000474637 TEX13AQ9BXU3 409 aaPredicted RBP5.39□□□□□ -1.55
GAPVD1-216ENST00000474637 LRRC4BQ9NT99 713 aa5.39□□□□□ -1.55
GAPVD1-216ENST00000474637 C4BP0C0L5 1744 aa5.39□□□□□ -1.55
GAPVD1-216ENST00000474637 RC3H1Q5TC82 1133 aaKnown RBP5.39□□□□□ -1.55
GAPVD1-216ENST00000474637 KCPQ6ZWJ8 1503 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms