RNA–Protein interactions for RNA: ENST00000474627.7

ATPAF2-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF2, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-206ENST00000474627 CCNL1Q9UK58 526 aaPredicted RBP25.79■■□□□ 1.72
ATPAF2-206ENST00000474627 WDR43Q15061 677 aaKnown RBP eCLIP25.78■■□□□ 1.72
ATPAF2-206ENST00000474627 PNNQ9H307 717 aaKnown RBP25.78■■□□□ 1.72
ATPAF2-206ENST00000474627 ATG3Q9NT62 314 aa25.78■■□□□ 1.72
ATPAF2-206ENST00000474627 ZBED9Q6R2W3 1325 aa25.78■■□□□ 1.72
ATPAF2-206ENST00000474627 SLC52A2Q9HAB3 445 aa25.77■■□□□ 1.72
ATPAF2-206ENST00000474627 LY75O60449 1722 aa25.75■■□□□ 1.71
ATPAF2-206ENST00000474627 IL17REQ8NFR9 667 aa25.75■■□□□ 1.71
ATPAF2-206ENST00000474627 STK32BQ9NY57 414 aa25.75■■□□□ 1.71
ATPAF2-206ENST00000474627 SCN11AQ9UI33 1791 aa25.75■■□□□ 1.71
ATPAF2-206ENST00000474627 MAPK8IP3Q9UPT6 1336 aa25.74■■□□□ 1.71
ATPAF2-206ENST00000474627 SLC15A2Q16348 729 aa25.73■■□□□ 1.71
ATPAF2-206ENST00000474627 ADAMTS8Q9UP79 889 aa25.73■■□□□ 1.71
ATPAF2-206ENST00000474627 LOC102724428A0A0B4J2F2 783 aa25.72■■□□□ 1.71
ATPAF2-206ENST00000474627 SIK1P57059 783 aa25.72■■□□□ 1.71
ATPAF2-206ENST00000474627 RTF1Q92541 710 aaKnown RBP25.72■■□□□ 1.71
ATPAF2-206ENST00000474627 ADAMTS7Q9UKP4 1686 aa25.71■■□□□ 1.71
ATPAF2-206ENST00000474627 TEFQ10587 303 aa25.7■■□□□ 1.71
ATPAF2-206ENST00000474627 ZNF827Q17R98 1081 aa25.7■■□□□ 1.71
ATPAF2-206ENST00000474627 CCDC146Q8IYE0 955 aa25.7■■□□□ 1.71
ATPAF2-206ENST00000474627 RBM42Q9BTD8 480 aaKnown RBP25.7■■□□□ 1.71
ATPAF2-206ENST00000474627 MRC1P22897 1456 aa25.7■■□□□ 1.71
ATPAF2-206ENST00000474627 NFE2L2Q16236 605 aa25.69■■□□□ 1.7
ATPAF2-206ENST00000474627 MCM10Q7L590 875 aa25.69■■□□□ 1.7
ATPAF2-206ENST00000474627 PAPPAQ13219 1627 aa25.69■■□□□ 1.7
ATPAF2-206ENST00000474627 AKT1S1Q96B36 256 aa25.69■■□□□ 1.7
ATPAF2-206ENST00000474627 PTCD1O75127 700 aaKnown RBP25.68■■□□□ 1.7
ATPAF2-206ENST00000474627 ATP6V1AP38606 617 aa25.68■■□□□ 1.7
ATPAF2-206ENST00000474627 DCTN1Q14203 1278 aa25.68■■□□□ 1.7
ATPAF2-206ENST00000474627 CEMIPQ8WUJ3 1361 aa25.67■■□□□ 1.7
ATPAF2-206ENST00000474627 HTATSF1O43719 755 aaKnown RBP25.67■■□□□ 1.7
ATPAF2-206ENST00000474627 SLC39A6Q13433 755 aa25.67■■□□□ 1.7
ATPAF2-206ENST00000474627 ITPK1Q13572 414 aa25.65■■□□□ 1.7
ATPAF2-206ENST00000474627 RUNDC1Q96C34 613 aa25.65■■□□□ 1.7
ATPAF2-206ENST00000474627 SLC4A9Q96Q91 983 aa25.65■■□□□ 1.7
ATPAF2-206ENST00000474627 VIRMAQ69YN4 1812 aaKnown RBP25.65■■□□□ 1.7
ATPAF2-206ENST00000474627 HMGB2P26583 209 aaKnown RBP25.65■■□□□ 1.7
ATPAF2-206ENST00000474627 TFCP2L1Q9NZI6 479 aa25.65■■□□□ 1.7
ATPAF2-206ENST00000474627 PDGFDQ9GZP0 370 aaPredicted RBP25.64■■□□□ 1.69
ATPAF2-206ENST00000474627 LINC00116Q8NCU8 138 aa25.63■■□□□ 1.69
ATPAF2-206ENST00000474627 TMPOP42166 694 aaKnown RBP25.62■■□□□ 1.69
ATPAF2-206ENST00000474627 RIPK4P57078 832 aa25.62■■□□□ 1.69
ATPAF2-206ENST00000474627 RRP7AQ9Y3A4 280 aaKnown RBP25.61■■□□□ 1.69
ATPAF2-206ENST00000474627 C5P01031 1676 aa25.61■■□□□ 1.69
ATPAF2-206ENST00000474627 TTC5Q8N0Z6 440 aa25.61■■□□□ 1.69
ATPAF2-206ENST00000474627 BTBD11A6QL63 1104 aa25.6■■□□□ 1.69
ATPAF2-206ENST00000474627 NEUROD2Q15784 382 aa25.6■■□□□ 1.69
ATPAF2-206ENST00000474627 AK7Q96M32 723 aa25.59■■□□□ 1.69
ATPAF2-206ENST00000474627 THUMPD2Q9BTF0 503 aaKnown RBP25.59■■□□□ 1.69
ATPAF2-206ENST00000474627 ZNF790Q6PG37 636 aa25.58■■□□□ 1.69
ATPAF2-206ENST00000474627 TAF1LQ8IZX4 1826 aa25.58■■□□□ 1.69
ATPAF2-206ENST00000474627 DLG5Q8TDM6 1919 aa25.58■■□□□ 1.68
ATPAF2-206ENST00000474627 PNPLA7Q6ZV29 1317 aa25.57■■□□□ 1.68
ATPAF2-206ENST00000474627 C4BP0C0L5 1744 aa25.56■■□□□ 1.68
ATPAF2-206ENST00000474627 TAF7Q15545 349 aaPredicted RBP25.56■■□□□ 1.68
ATPAF2-206ENST00000474627 SIPA1L3O60292 1781 aaPredicted RBP25.56■■□□□ 1.68
ATPAF2-206ENST00000474627 KCPQ6ZWJ8 1503 aa25.55■■□□□ 1.68
ATPAF2-206ENST00000474627 KCNQ3O43525 872 aa25.55■■□□□ 1.68
ATPAF2-206ENST00000474627 ZBTB7AO95365 584 aa25.55■■□□□ 1.68
ATPAF2-206ENST00000474627 LMOD3Q0VAK6 560 aa25.55■■□□□ 1.68
ATPAF2-206ENST00000474627 ZNF496Q96IT1 587 aaPredicted RBP25.55■■□□□ 1.68
ATPAF2-206ENST00000474627 ZNF831Q5JPB2 1677 aa25.54■■□□□ 1.68
ATPAF2-206ENST00000474627 DNAJC10Q8IXB1 793 aa25.54■■□□□ 1.68
ATPAF2-206ENST00000474627 CASZ1Q86V15 1759 aa25.53■■□□□ 1.68
ATPAF2-206ENST00000474627 APAF1O14727 1248 aa25.53■■□□□ 1.68
ATPAF2-206ENST00000474627 GNPATO15228 680 aa25.53■■□□□ 1.68
ATPAF2-206ENST00000474627 SMIM5Q71RC9 77 aa25.53■■□□□ 1.68
ATPAF2-206ENST00000474627 MIS18AQ9NYP9 233 aa25.53■■□□□ 1.68
ATPAF2-206ENST00000474627 MSH5O43196 834 aa25.52■■□□□ 1.68
ATPAF2-206ENST00000474627 AMIGO3Q86WK7 504 aa25.52■■□□□ 1.68
ATPAF2-206ENST00000474627 COL23A1Q86Y22 540 aaPredicted RBP25.52■■□□□ 1.68
ATPAF2-206ENST00000474627 PHF14O94880 888 aa25.52■■□□□ 1.68
ATPAF2-206ENST00000474627 VSIG10Q8N0Z9 540 aa25.52■■□□□ 1.68
ATPAF2-206ENST00000474627 RC3H1Q5TC82 1133 aaKnown RBP25.51■■□□□ 1.67
ATPAF2-206ENST00000474627 FMNL2Q96PY5 1086 aa25.51■■□□□ 1.67
ATPAF2-206ENST00000474627 SPON1Q9HCB6 807 aa25.51■■□□□ 1.67
ATPAF2-206ENST00000474627 TRIM35Q9UPQ4 493 aa25.51■■□□□ 1.67
ATPAF2-206ENST00000474627 CNTNAP4Q9C0A0 1308 aa25.5■■□□□ 1.67
ATPAF2-206ENST00000474627 TUBGCP6Q96RT7 1819 aa25.5■■□□□ 1.67
ATPAF2-206ENST00000474627 CRKLP46109 303 aaKnown RBP25.5■■□□□ 1.67
ATPAF2-206ENST00000474627 FLAD1Q8NFF5 587 aa25.5■■□□□ 1.67
ATPAF2-206ENST00000474627 ATF5Q9Y2D1 282 aaPredicted RBP25.5■■□□□ 1.67
ATPAF2-206ENST00000474627 UBR2Q8IWV8 1755 aa25.49■■□□□ 1.67
ATPAF2-206ENST00000474627 HEG1Q9ULI3 1381 aa25.49■■□□□ 1.67
ATPAF2-206ENST00000474627 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.49■■□□□ 1.67
ATPAF2-206ENST00000474627 NEFLP07196 543 aa25.48■■□□□ 1.67
ATPAF2-206ENST00000474627 MTFR1LQ9H019 292 aa25.48■■□□□ 1.67
ATPAF2-206ENST00000474627 TJP1Q07157 1748 aa25.48■■□□□ 1.67
ATPAF2-206ENST00000474627 QSER1Q2KHR3 1735 aa25.48■■□□□ 1.67
ATPAF2-206ENST00000474627 SSFA2P28290 1259 aa25.48■■□□□ 1.67
ATPAF2-206ENST00000474627 SLC16A10Q8TF71 515 aa25.48■■□□□ 1.67
ATPAF2-206ENST00000474627 RTCBQ9Y3I0 505 aaKnown RBP25.48■■□□□ 1.67
ATPAF2-206ENST00000474627 COL5A3P25940 1745 aaPredicted RBP25.47■■□□□ 1.67
ATPAF2-206ENST00000474627 CYP19A1P11511 503 aaPredicted RBP25.47■■□□□ 1.67
ATPAF2-206ENST00000474627 SUPT16HQ9Y5B9 1047 aaKnown RBP25.47■■□□□ 1.67
ATPAF2-206ENST00000474627 SENP3-EIF4A1A0A087X0R7 540 aa25.46■■□□□ 1.67
ATPAF2-206ENST00000474627 INTS5Q6P9B9 1019 aaKnown RBP25.46■■□□□ 1.67
ATPAF2-206ENST00000474627 SRCAPQ6ZRS2 3230 aa25.46■■□□□ 1.67
ATPAF2-206ENST00000474627 RPS6KA4O75676 772 aa25.45■■□□□ 1.66
ATPAF2-206ENST00000474627 CCDC87Q9NVE4 849 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms