RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 RNMTO43148 476 aaKnown RBP27.28■■□□□ 1.96
CCM2-206ENST00000474617 EIF5BO60841 1220 aaKnown RBP27.28■■□□□ 1.96
CCM2-206ENST00000474617 ANKRD44Q8N8A2 993 aa27.27■■□□□ 1.96
CCM2-206ENST00000474617 SPG7Q9UQ90 795 aa27.27■■□□□ 1.96
CCM2-206ENST00000474617 EIF4A1P60842 406 aaKnown RBP27.26■■□□□ 1.96
CCM2-206ENST00000474617 ZC3H6P61129 1189 aaKnown RBP27.26■■□□□ 1.96
CCM2-206ENST00000474617 FLIIQ13045 1269 aa27.26■■□□□ 1.96
CCM2-206ENST00000474617 NPM2Q86SE8 214 aaKnown RBP27.26■■□□□ 1.96
CCM2-206ENST00000474617 SLAIN2Q9P270 581 aa27.26■■□□□ 1.96
CCM2-206ENST00000474617 TATP17735 454 aaPredicted RBP27.26■■□□□ 1.95
CCM2-206ENST00000474617 RGPD5Q99666 1765 aa27.25■■□□□ 1.95
CCM2-206ENST00000474617 HMMRO75330 724 aa27.25■■□□□ 1.95
CCM2-206ENST00000474617 MYT1Q01538 1121 aa27.25■■□□□ 1.95
CCM2-206ENST00000474617 HDGFL1Q5TGJ6 251 aa27.25■■□□□ 1.95
CCM2-206ENST00000474617 BTBD11A6QL63 1104 aa27.24■■□□□ 1.95
CCM2-206ENST00000474617 GNAI3P08754 354 aa27.23■■□□□ 1.95
CCM2-206ENST00000474617 DCTPP1Q9H773 170 aa27.23■■□□□ 1.95
CCM2-206ENST00000474617 ATP10DQ9P241 1426 aa27.23■■□□□ 1.95
CCM2-206ENST00000474617 LGR6Q9HBX8 967 aa27.22■■□□□ 1.95
CCM2-206ENST00000474617 SIPA1L3O60292 1781 aaPredicted RBP27.22■■□□□ 1.95
CCM2-206ENST00000474617 HSP90AB1P08238 724 aaKnown RBP27.21■■□□□ 1.95
CCM2-206ENST00000474617 FKBP5Q13451 457 aaPredicted RBP27.21■■□□□ 1.95
CCM2-206ENST00000474617 SIRT2Q8IXJ6 389 aa27.21■■□□□ 1.95
CCM2-206ENST00000474617 NLRP2Q9NX02 1062 aa27.21■■□□□ 1.95
CCM2-206ENST00000474617 HEG1Q9ULI3 1381 aa27.2■■□□□ 1.94
CCM2-206ENST00000474617 ZNF335Q9H4Z2 1342 aaPredicted RBP27.19■■□□□ 1.94
CCM2-206ENST00000474617 BMP2KLQ5H9B9 411 aa27.19■■□□□ 1.94
CCM2-206ENST00000474617 CSB-PGBD3P0DP91 1061 aa27.18■■□□□ 1.94
CCM2-206ENST00000474617 CEP85Q6P2H3 762 aa27.18■■□□□ 1.94
CCM2-206ENST00000474617 MPRIPQ6WCQ1 1025 aa27.18■■□□□ 1.94
CCM2-206ENST00000474617 G2E3Q7L622 706 aa27.18■■□□□ 1.94
CCM2-206ENST00000474617 PKD1L3Q7Z443 1732 aa27.18■■□□□ 1.94
CCM2-206ENST00000474617 GNAI2P04899 355 aa27.17■■□□□ 1.94
CCM2-206ENST00000474617 ANKRD45Q5TZF3 282 aa27.17■■□□□ 1.94
CCM2-206ENST00000474617 C1orf115Q9H7X2 142 aa27.17■■□□□ 1.94
CCM2-206ENST00000474617 NHSL1Q5SYE7 1610 aa27.16■■□□□ 1.94
CCM2-206ENST00000474617 IFNL2Q8IZJ0 200 aa27.16■■□□□ 1.94
CCM2-206ENST00000474617 DDX17Q92841 729 aaKnown RBP27.16■■□□□ 1.94
CCM2-206ENST00000474617 SCN11AQ9UI33 1791 aa27.16■■□□□ 1.94
CCM2-206ENST00000474617 MRC1P22897 1456 aa27.15■■□□□ 1.94
CCM2-206ENST00000474617 LNPKQ9C0E8 428 aa27.15■■□□□ 1.94
CCM2-206ENST00000474617 DBF4Q9UBU7 674 aaPredicted RBP27.15■■□□□ 1.94
CCM2-206ENST00000474617 DAXXQ9UER7 740 aaPredicted RBP27.15■■□□□ 1.94
CCM2-206ENST00000474617 SLC4A10Q6U841 1118 aa27.14■■□□□ 1.94
CCM2-206ENST00000474617 MEIS3Q99687 375 aa27.14■■□□□ 1.94
CCM2-206ENST00000474617 PHKG2P15735 406 aa27.13■■□□□ 1.93
CCM2-206ENST00000474617 DCAF5Q96JK2 942 aa27.13■■□□□ 1.93
CCM2-206ENST00000474617 HDAC5Q9UQL6 1122 aa27.13■■□□□ 1.93
CCM2-206ENST00000474617 PARP4Q9UKK3 1724 aaKnown RBP27.13■■□□□ 1.93
CCM2-206ENST00000474617 IBTKQ9P2D0 1353 aaPredicted RBP27.12■■□□□ 1.93
CCM2-206ENST00000474617 WDR17Q8IZU2 1322 aa27.11■■□□□ 1.93
CCM2-206ENST00000474617 MEGF6O75095 1541 aa27.11■■□□□ 1.93
CCM2-206ENST00000474617 SLC52A2Q9HAB3 445 aa27.11■■□□□ 1.93
CCM2-206ENST00000474617 GIGYF1O75420 1035 aaPredicted RBP27.1■■□□□ 1.93
CCM2-206ENST00000474617 PLEKHG5O94827 1062 aa27.1■■□□□ 1.93
CCM2-206ENST00000474617 PRDM11Q9NQV5 511 aa27.1■■□□□ 1.93
CCM2-206ENST00000474617 ABCA3Q99758 1704 aa27.09■■□□□ 1.93
CCM2-206ENST00000474617 F6X3S4 739 aa27.09■■□□□ 1.93
CCM2-206ENST00000474617 CABLES1Q8TDN4 633 aa27.09■■□□□ 1.93
CCM2-206ENST00000474617 TBC1D32Q96NH3 1257 aa27.09■■□□□ 1.93
CCM2-206ENST00000474617 HYPKQ9NX55 129 aa27.09■■□□□ 1.93
CCM2-206ENST00000474617 SRCIN1Q9C0H9 1055 aa27.07■■□□□ 1.92
CCM2-206ENST00000474617 KDM6AO15550 1401 aaPredicted RBP27.06■■□□□ 1.92
CCM2-206ENST00000474617 BECN1Q14457 450 aa27.06■■□□□ 1.92
CCM2-206ENST00000474617 COL5A2P05997 1499 aaPredicted RBP27.05■■□□□ 1.92
CCM2-206ENST00000474617 EIF2S2P20042 333 aaKnown RBP27.05■■□□□ 1.92
CCM2-206ENST00000474617 CHRNA2Q15822 529 aa27.05■■□□□ 1.92
CCM2-206ENST00000474617 CHPF2Q9P2E5 772 aa27.05■■□□□ 1.92
CCM2-206ENST00000474617 ZNF790Q6PG37 636 aa27.04■■□□□ 1.92
CCM2-206ENST00000474617 DNAAF4Q8WXU2 420 aa27.04■■□□□ 1.92
CCM2-206ENST00000474617 PCDH11XQ9BZA7 1347 aa27.03■■□□□ 1.92
CCM2-206ENST00000474617 PCDH11YQ9BZA8 1340 aa27.03■■□□□ 1.92
CCM2-206ENST00000474617 DDX58O95786 925 aaKnown RBP27.03■■□□□ 1.92
CCM2-206ENST00000474617 UBTFL1P0CB47 393 aaPredicted RBP27.03■■□□□ 1.92
CCM2-206ENST00000474617 ATP8B2P98198 1209 aa27.03■■□□□ 1.92
CCM2-206ENST00000474617 CARD10Q9BWT7 1032 aa27.03■■□□□ 1.92
CCM2-206ENST00000474617 ALDH1L1O75891 902 aa27.02■■□□□ 1.92
CCM2-206ENST00000474617 NECTIN2Q92692 538 aa27.02■■□□□ 1.92
CCM2-206ENST00000474617 KCNQ3O43525 872 aa27.01■■□□□ 1.91
CCM2-206ENST00000474617 DDX21Q9NR30 783 aaKnown RBP eCLIP27.01■■□□□ 1.91
CCM2-206ENST00000474617 SEC24BO95487 1268 aa27■■□□□ 1.91
CCM2-206ENST00000474617 USP44Q9H0E7 712 aa27■■□□□ 1.91
CCM2-206ENST00000474617 PHAXQ9H814 394 aaKnown RBP27■■□□□ 1.91
CCM2-206ENST00000474617 KSR2Q6VAB6 950 aa26.99■■□□□ 1.91
CCM2-206ENST00000474617 PLEKHM2Q8IWE5 1019 aa26.99■■□□□ 1.91
CCM2-206ENST00000474617 BEND3Q5T5X7 828 aa26.98■■□□□ 1.91
CCM2-206ENST00000474617 TOM1L2Q6ZVM7 507 aa26.98■■□□□ 1.91
CCM2-206ENST00000474617 TTC5Q8N0Z6 440 aa26.98■■□□□ 1.91
CCM2-206ENST00000474617 CYP27B1O15528 508 aa26.97■■□□□ 1.91
CCM2-206ENST00000474617 OSBPL3Q9H4L5 887 aa26.97■■□□□ 1.91
CCM2-206ENST00000474617 PI4KAP2A4QPH2 592 aa26.96■■□□□ 1.91
CCM2-206ENST00000474617 ERVV-2B6SEH9 535 aa26.96■■□□□ 1.91
CCM2-206ENST00000474617 CDC45O75419 566 aa26.96■■□□□ 1.91
CCM2-206ENST00000474617 PI4KAP1Q8N8J0 262 aa26.96■■□□□ 1.91
CCM2-206ENST00000474617 C22orf23Q9BZE7 217 aa26.96■■□□□ 1.91
CCM2-206ENST00000474617 AHDC1Q5TGY3 1603 aaPredicted RBP26.96■■□□□ 1.91
CCM2-206ENST00000474617 RAB11FIP3O75154 756 aa26.95■■□□□ 1.91
CCM2-206ENST00000474617 NKX1-1Q15270 411 aaPredicted RBP26.95■■□□□ 1.91
CCM2-206ENST00000474617 ZCRB1Q8TBF4 217 aaKnown RBP26.95■■□□□ 1.91
CCM2-206ENST00000474617 FMNL2Q96PY5 1086 aa26.95■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 628.7 ms