RNA–Protein interactions for RNA: ENST00000474612.1

NOTCH4-204, Transcript of notch 4, humanhuman

TSL 5

Gene NOTCH4, Length 5,267 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-204ENST00000474612 NUTM1Q86Y26 1132 aa21.2■□□□□ 0.99
NOTCH4-204ENST00000474612 JAKMIP1Q96N16 626 aaKnown RBP21.2■□□□□ 0.99
NOTCH4-204ENST00000474612 ZNF76P36508 570 aa21.2■□□□□ 0.98
NOTCH4-204ENST00000474612 CDC5LQ99459 802 aaKnown RBP21.2■□□□□ 0.98
NOTCH4-204ENST00000474612 PPP1R42Q7Z4L9 355 aa21.2■□□□□ 0.98
NOTCH4-204ENST00000474612 ATP10BO94823 1461 aa21.2■□□□□ 0.98
NOTCH4-204ENST00000474612 LARP1BQ659C4 914 aaKnown RBP21.2■□□□□ 0.98
NOTCH4-204ENST00000474612 CEBPZQ03701 1054 aaKnown RBP21.2■□□□□ 0.98
NOTCH4-204ENST00000474612 WDR7Q9Y4E6 1490 aa21.19■□□□□ 0.98
NOTCH4-204ENST00000474612 SMARCE1Q969G3 411 aa21.19■□□□□ 0.98
NOTCH4-204ENST00000474612 MKNK2Q9HBH9 465 aa21.19■□□□□ 0.98
NOTCH4-204ENST00000474612 SSH1Q8WYL5 1049 aa21.19■□□□□ 0.98
NOTCH4-204ENST00000474612 DACH1Q9UI36 760 aa21.19■□□□□ 0.98
NOTCH4-204ENST00000474612 ANKRD36BQ8N2N9 1353 aa21.19■□□□□ 0.98
NOTCH4-204ENST00000474612 MX1P20591 662 aa21.19■□□□□ 0.98
NOTCH4-204ENST00000474612 RFC4P35249 363 aa21.18■□□□□ 0.98
NOTCH4-204ENST00000474612 ZHX3Q9H4I2 956 aa21.18■□□□□ 0.98
NOTCH4-204ENST00000474612 KRT85P78386 507 aa21.18■□□□□ 0.98
NOTCH4-204ENST00000474612 ZBTB3Q9H5J0 574 aa21.18■□□□□ 0.98
NOTCH4-204ENST00000474612 PTPRCP08575 1304 aa21.18■□□□□ 0.98
NOTCH4-204ENST00000474612 SNRPA1P09661 255 aaKnown RBP21.18■□□□□ 0.98
NOTCH4-204ENST00000474612 ME1P48163 572 aa21.18■□□□□ 0.98
NOTCH4-204ENST00000474612 DDX46Q7L014 1031 aaKnown RBP21.17■□□□□ 0.98
NOTCH4-204ENST00000474612 BIVM-ERCC5R4GMW8 1640 aa21.17■□□□□ 0.98
NOTCH4-204ENST00000474612 C6orf229H3BNL8 230 aa21.17■□□□□ 0.98
NOTCH4-204ENST00000474612 NAPBQ9H115 298 aa21.17■□□□□ 0.98
NOTCH4-204ENST00000474612 DUOX2Q9NRD8 1548 aa21.16■□□□□ 0.98
NOTCH4-204ENST00000474612 GPTP24298 496 aa21.16■□□□□ 0.98
NOTCH4-204ENST00000474612 RAPGEF6Q8TEU7 1601 aa21.16■□□□□ 0.98
NOTCH4-204ENST00000474612 ZCRB1Q8TBF4 217 aaKnown RBP21.16■□□□□ 0.98
NOTCH4-204ENST00000474612 CWC25Q9NXE8 425 aaPredicted RBP21.16■□□□□ 0.98
NOTCH4-204ENST00000474612 RIMS2Q9UQ26 1411 aa21.15■□□□□ 0.98
NOTCH4-204ENST00000474612 RARSP54136 660 aaKnown RBP21.15■□□□□ 0.98
NOTCH4-204ENST00000474612 FLIIQ13045 1269 aa21.15■□□□□ 0.98
NOTCH4-204ENST00000474612 HSP90AB2PQ58FF8 381 aa21.15■□□□□ 0.98
NOTCH4-204ENST00000474612 TRIM5Q9C035 493 aa21.15■□□□□ 0.98
NOTCH4-204ENST00000474612 THOC2Q8NI27 1593 aaKnown RBP21.15■□□□□ 0.98
NOTCH4-204ENST00000474612 K7ELQ4 463 aaPredicted RBP21.15■□□□□ 0.98
NOTCH4-204ENST00000474612 CDR1P51861 262 aa21.15■□□□□ 0.98
NOTCH4-204ENST00000474612 SMARCC1Q92922 1105 aaPredicted RBP21.15■□□□□ 0.98
NOTCH4-204ENST00000474612 RPRD2Q5VT52 1461 aaKnown RBP21.15■□□□□ 0.98
NOTCH4-204ENST00000474612 PRPF40AO75400 957 aaKnown RBP21.15■□□□□ 0.98
NOTCH4-204ENST00000474612 LDHCP07864 332 aa21.15■□□□□ 0.98
NOTCH4-204ENST00000474612 MNS1Q8NEH6 495 aa21.15■□□□□ 0.98
NOTCH4-204ENST00000474612 SEC63Q9UGP8 760 aaKnown RBP21.15■□□□□ 0.98
NOTCH4-204ENST00000474612 MINDY4BA8MYZ0 360 aa21.14■□□□□ 0.98
NOTCH4-204ENST00000474612 SMC2O95347 1197 aa21.14■□□□□ 0.97
NOTCH4-204ENST00000474612 C19orf44Q9H6X5 657 aa21.14■□□□□ 0.97
NOTCH4-204ENST00000474612 PDCL3Q9H2J4 239 aa21.14■□□□□ 0.97
NOTCH4-204ENST00000474612 BOLA2Q9H3K6 86 aa21.14■□□□□ 0.97
NOTCH4-204ENST00000474612 CFAP45Q9UL16 551 aa21.14■□□□□ 0.97
NOTCH4-204ENST00000474612 CCDC196A0A1B0GTZ2 297 aa21.13■□□□□ 0.97
NOTCH4-204ENST00000474612 PAF1Q8N7H5 531 aa21.13■□□□□ 0.97
NOTCH4-204ENST00000474612 TNIP1Q15025 636 aa21.13■□□□□ 0.97
NOTCH4-204ENST00000474612 ST5P78524 1137 aa21.13■□□□□ 0.97
NOTCH4-204ENST00000474612 ZNF444Q8N0Y2 327 aaPredicted RBP21.13■□□□□ 0.97
NOTCH4-204ENST00000474612 ZNHIT6Q9NWK9 470 aaKnown RBP21.13■□□□□ 0.97
NOTCH4-204ENST00000474612 CCDC184Q52MB2 194 aa21.13■□□□□ 0.97
NOTCH4-204ENST00000474612 F6X3S4 739 aa21.12■□□□□ 0.97
NOTCH4-204ENST00000474612 RNF41Q9H4P4 317 aaPredicted RBP21.12■□□□□ 0.97
NOTCH4-204ENST00000474612 CAVIN1Q6NZI2 390 aaKnown RBP21.12■□□□□ 0.97
NOTCH4-204ENST00000474612 RUFY1Q96T51 708 aa21.12■□□□□ 0.97
NOTCH4-204ENST00000474612 SSBP05455 408 aaKnown RBP eCLIP21.12■□□□□ 0.97
NOTCH4-204ENST00000474612 TTLL12Q14166 644 aaPredicted RBP21.11■□□□□ 0.97
NOTCH4-204ENST00000474612 LDHAL6AQ6ZMR3 332 aa21.11■□□□□ 0.97
NOTCH4-204ENST00000474612 ZNF219Q9P2Y4 722 aaPredicted RBP21.11■□□□□ 0.97
NOTCH4-204ENST00000474612 LRRFIP2Q9Y608 721 aaKnown RBP21.11■□□□□ 0.97
NOTCH4-204ENST00000474612 MAP3K2Q9Y2U5 619 aa21.11■□□□□ 0.97
NOTCH4-204ENST00000474612 DHX8Q14562 1220 aaKnown RBP21.11■□□□□ 0.97
NOTCH4-204ENST00000474612 IQCA1Q86XH1 822 aa21.11■□□□□ 0.97
NOTCH4-204ENST00000474612 BRPF1P55201 1214 aaPredicted RBP21.11■□□□□ 0.97
NOTCH4-204ENST00000474612 TSPY26PQ9H489 355 aa21.11■□□□□ 0.97
NOTCH4-204ENST00000474612 LUC7LQ9NQ29 371 aaKnown RBP21.11■□□□□ 0.97
NOTCH4-204ENST00000474612 CEP131Q9UPN4 1083 aa21.1■□□□□ 0.97
NOTCH4-204ENST00000474612 ABCC10Q5T3U5 1492 aa21.1■□□□□ 0.97
NOTCH4-204ENST00000474612 PIK3R4Q99570 1358 aa21.1■□□□□ 0.97
NOTCH4-204ENST00000474612 RNF214Q8ND24 703 aa21.1■□□□□ 0.97
NOTCH4-204ENST00000474612 CTCFLQ8NI51 663 aaPredicted RBP21.1■□□□□ 0.97
NOTCH4-204ENST00000474612 TTF1Q15361 905 aaPredicted RBP21.1■□□□□ 0.97
NOTCH4-204ENST00000474612 TRAK2O60296 914 aa21.09■□□□□ 0.97
NOTCH4-204ENST00000474612 MRE11P49959 708 aa21.09■□□□□ 0.97
NOTCH4-204ENST00000474612 DDB1Q16531 1140 aa21.09■□□□□ 0.97
NOTCH4-204ENST00000474612 NBPF6Q5VWK0 638 aa21.09■□□□□ 0.97
NOTCH4-204ENST00000474612 NBPF5PQ86XG9 351 aaPredicted RBP21.09■□□□□ 0.97
NOTCH4-204ENST00000474612 NBPF4Q96M43 638 aa21.09■□□□□ 0.97
NOTCH4-204ENST00000474612 MYO6Q9UM54 1294 aa21.09■□□□□ 0.97
NOTCH4-204ENST00000474612 NKTRP30414 1462 aaKnown RBP21.09■□□□□ 0.97
NOTCH4-204ENST00000474612 NASPP49321 788 aaPredicted RBP21.09■□□□□ 0.97
NOTCH4-204ENST00000474612 C8orf37Q96NL8 207 aa21.09■□□□□ 0.97
NOTCH4-204ENST00000474612 ACBD3Q9H3P7 528 aa21.09■□□□□ 0.97
NOTCH4-204ENST00000474612 NFKBIBQ15653 356 aa21.09■□□□□ 0.97
NOTCH4-204ENST00000474612 CCDC39Q9UFE4 941 aa21.09■□□□□ 0.97
NOTCH4-204ENST00000474612 CCP110O43303 1012 aa21.09■□□□□ 0.97
NOTCH4-204ENST00000474612 TNNT3P45378 269 aaPredicted RBP21.09■□□□□ 0.97
NOTCH4-204ENST00000474612 SPTY2D1Q68D10 685 aaPredicted RBP21.09■□□□□ 0.97
NOTCH4-204ENST00000474612 ZNF622Q969S3 477 aaKnown RBP eCLIP21.09■□□□□ 0.97
NOTCH4-204ENST00000474612 ARGLU1Q9NWB6 273 aaPredicted RBP21.09■□□□□ 0.97
NOTCH4-204ENST00000474612 HMGB1P09429 215 aaKnown RBP21.08■□□□□ 0.97
NOTCH4-204ENST00000474612 CAGE1Q8TC20 777 aa21.08■□□□□ 0.97
NOTCH4-204ENST00000474612 CASTP20810 708 aaKnown RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms