RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 ITPK1Q13572 414 aa21.41■■□□□ 1.02
ITGB1-210ENST00000474568 SMIM5Q71RC9 77 aa21.41■■□□□ 1.02
ITGB1-210ENST00000474568 LINC00116Q8NCU8 138 aa21.41■■□□□ 1.02
ITGB1-210ENST00000474568 PHACTR3Q96KR7 559 aa21.41■■□□□ 1.02
ITGB1-210ENST00000474568 AK7Q96M32 723 aa21.41■■□□□ 1.02
ITGB1-210ENST00000474568 MTFR1LQ9H019 292 aa21.41■■□□□ 1.02
ITGB1-210ENST00000474568 PTCD1O75127 700 aaKnown RBP21.39■■□□□ 1.01
ITGB1-210ENST00000474568 PTGER2P43116 358 aa21.39■■□□□ 1.01
ITGB1-210ENST00000474568 GAS2L2Q8NHY3 880 aa21.39■■□□□ 1.01
ITGB1-210ENST00000474568 PHF14O94880 888 aa21.38■■□□□ 1.01
ITGB1-210ENST00000474568 RALBP1Q15311 655 aa21.38■■□□□ 1.01
ITGB1-210ENST00000474568 COL23A1Q86Y22 540 aaPredicted RBP21.38■■□□□ 1.01
ITGB1-210ENST00000474568 SLC4A9Q96Q91 983 aa21.38■■□□□ 1.01
ITGB1-210ENST00000474568 SLC52A2Q9HAB3 445 aa21.38■■□□□ 1.01
ITGB1-210ENST00000474568 AMIGO3Q86WK7 504 aa21.37■■□□□ 1.01
ITGB1-210ENST00000474568 C5P01031 1676 aa21.37■■□□□ 1.01
ITGB1-210ENST00000474568 MAP3K5Q99683 1374 aa21.36■■□□□ 1.01
ITGB1-210ENST00000474568 SLC39A6Q13433 755 aa21.36■■□□□ 1.01
ITGB1-210ENST00000474568 GNAT3A8MTJ3 354 aa21.35■■□□□ 1.01
ITGB1-210ENST00000474568 MSL1Q68DK7 614 aa21.35■■□□□ 1.01
ITGB1-210ENST00000474568 TUBGCP6Q96RT7 1819 aa21.34■■□□□ 1.01
ITGB1-210ENST00000474568 FCHSD2O94868 740 aa21.34■■□□□ 1.01
ITGB1-210ENST00000474568 C4BP0C0L5 1744 aa21.33■■□□□ 1.01
ITGB1-210ENST00000474568 GNPATO15228 680 aa21.33■■□□□ 1.01
ITGB1-210ENST00000474568 IL17REQ8NFR9 667 aa21.33■■□□□ 1.01
ITGB1-210ENST00000474568 SLC16A10Q8TF71 515 aa21.33■■□□□ 1.01
ITGB1-210ENST00000474568 SGIP1Q9BQI5 828 aa21.33■■□□□ 1.01
ITGB1-210ENST00000474568 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.32■■□□□ 1
ITGB1-210ENST00000474568 HMGB2P26583 209 aaKnown RBP21.32■■□□□ 1
ITGB1-210ENST00000474568 MYBBP1AQ9BQG0 1328 aaKnown RBP21.31■■□□□ 1
ITGB1-210ENST00000474568 SCN11AQ9UI33 1791 aa21.31■■□□□ 1
ITGB1-210ENST00000474568 TEFQ10587 303 aa21.31■■□□□ 1
ITGB1-210ENST00000474568 MRC1P22897 1456 aa21.31■■□□□ 1
ITGB1-210ENST00000474568 TAF1LQ8IZX4 1826 aa21.3■■□□□ 1
ITGB1-210ENST00000474568 KLHL34Q8N239 644 aa21.3■■□□□ 1
ITGB1-210ENST00000474568 FLAD1Q8NFF5 587 aa21.3■■□□□ 1
ITGB1-210ENST00000474568 ARXQ96QS3 562 aa21.3■■□□□ 1
ITGB1-210ENST00000474568 POLD1P28340 1107 aa21.29■■□□□ 1
ITGB1-210ENST00000474568 QSER1Q2KHR3 1735 aa21.29■■□□□ 1
ITGB1-210ENST00000474568 ZNF316A6NFI3 1004 aaPredicted RBP21.28■■□□□ 1
ITGB1-210ENST00000474568 DCTN1Q14203 1278 aa21.28■■□□□ 1
ITGB1-210ENST00000474568 MCM10Q7L590 875 aa21.28■■□□□ 1
ITGB1-210ENST00000474568 FHDC1Q9C0D6 1143 aaPredicted RBP21.28■■□□□ 1
ITGB1-210ENST00000474568 NEFMP07197 916 aa21.27■■□□□ 1
ITGB1-210ENST00000474568 SSFA2P28290 1259 aa21.27■■□□□ 1
ITGB1-210ENST00000474568 DNAJC10Q8IXB1 793 aa21.27■■□□□ 1
ITGB1-210ENST00000474568 RTF1Q92541 710 aaKnown RBP21.27■■□□□ 1
ITGB1-210ENST00000474568 TTC5Q8N0Z6 440 aa21.26■□□□□ 0.99
ITGB1-210ENST00000474568 PRKRIP1Q9H875 184 aaPredicted RBP21.26■□□□□ 0.99
ITGB1-210ENST00000474568 RTCBQ9Y3I0 505 aaKnown RBP21.26■□□□□ 0.99
ITGB1-210ENST00000474568 ADAMTS7Q9UKP4 1686 aa21.25■□□□□ 0.99
ITGB1-210ENST00000474568 CRKLP46109 303 aaKnown RBP21.25■□□□□ 0.99
ITGB1-210ENST00000474568 CNTNAP4Q9C0A0 1308 aa21.25■□□□□ 0.99
ITGB1-210ENST00000474568 PLEKHF1Q96S99 279 aa21.24■□□□□ 0.99
ITGB1-210ENST00000474568 CEMIPQ8WUJ3 1361 aa21.23■□□□□ 0.99
ITGB1-210ENST00000474568 TRAPPC3LQ5T215 181 aa21.23■□□□□ 0.99
ITGB1-210ENST00000474568 RC3H1Q5TC82 1133 aaKnown RBP21.23■□□□□ 0.99
ITGB1-210ENST00000474568 SYT17Q9BSW7 474 aa21.23■□□□□ 0.99
ITGB1-210ENST00000474568 MAPK8IP3Q9UPT6 1336 aa21.23■□□□□ 0.99
ITGB1-210ENST00000474568 KCNQ3O43525 872 aa21.22■□□□□ 0.99
ITGB1-210ENST00000474568 RPS6KA4O75676 772 aa21.22■□□□□ 0.99
ITGB1-210ENST00000474568 KCPQ6ZWJ8 1503 aa21.22■□□□□ 0.99
ITGB1-210ENST00000474568 UBR3Q6ZT12 1888 aa21.22■□□□□ 0.99
ITGB1-210ENST00000474568 BTBD11A6QL63 1104 aa21.21■□□□□ 0.99
ITGB1-210ENST00000474568 ZNF790Q6PG37 636 aa21.21■□□□□ 0.99
ITGB1-210ENST00000474568 ARHGEF1Q92888 912 aaKnown RBP21.21■□□□□ 0.99
ITGB1-210ENST00000474568 ZNF496Q96IT1 587 aaPredicted RBP21.21■□□□□ 0.99
ITGB1-210ENST00000474568 NFE2L2Q16236 605 aa21.2■□□□□ 0.98
ITGB1-210ENST00000474568 INTS5Q6P9B9 1019 aaKnown RBP21.2■□□□□ 0.98
ITGB1-210ENST00000474568 CCDC146Q8IYE0 955 aa21.2■□□□□ 0.98
ITGB1-210ENST00000474568 PNNQ9H307 717 aaKnown RBP21.2■□□□□ 0.98
ITGB1-210ENST00000474568 TJP1Q07157 1748 aa21.19■□□□□ 0.98
ITGB1-210ENST00000474568 WDR43Q15061 677 aaKnown RBP eCLIP21.19■□□□□ 0.98
ITGB1-210ENST00000474568 CCDC87Q9NVE4 849 aa21.19■□□□□ 0.98
ITGB1-210ENST00000474568 VIRMAQ69YN4 1812 aaKnown RBP21.19■□□□□ 0.98
ITGB1-210ENST00000474568 ZNF831Q5JPB2 1677 aa21.18■□□□□ 0.98
ITGB1-210ENST00000474568 COL5A3P25940 1745 aaPredicted RBP21.18■□□□□ 0.98
ITGB1-210ENST00000474568 CYP19A1P11511 503 aaPredicted RBP21.18■□□□□ 0.98
ITGB1-210ENST00000474568 RFC4P35249 363 aa21.18■□□□□ 0.98
ITGB1-210ENST00000474568 THUMPD2Q9BTF0 503 aaKnown RBP21.18■□□□□ 0.98
ITGB1-210ENST00000474568 HTATSF1O43719 755 aaKnown RBP21.17■□□□□ 0.98
ITGB1-210ENST00000474568 MIS18AQ9NYP9 233 aa21.17■□□□□ 0.98
ITGB1-210ENST00000474568 SRP68Q9UHB9 627 aaKnown RBP21.17■□□□□ 0.98
ITGB1-210ENST00000474568 HEG1Q9ULI3 1381 aa21.16■□□□□ 0.98
ITGB1-210ENST00000474568 ADRA2BP18089 450 aa21.16■□□□□ 0.98
ITGB1-210ENST00000474568 VSIG10Q8N0Z9 540 aa21.16■□□□□ 0.98
ITGB1-210ENST00000474568 FMNL2Q96PY5 1086 aa21.16■□□□□ 0.98
ITGB1-210ENST00000474568 ZBTB1Q9Y2K1 713 aa21.16■□□□□ 0.98
ITGB1-210ENST00000474568 CANXP27824 592 aaKnown RBP21.15■□□□□ 0.98
ITGB1-210ENST00000474568 NLGN2Q8NFZ4 835 aa21.15■□□□□ 0.98
ITGB1-210ENST00000474568 RRP7AQ9Y3A4 280 aaKnown RBP21.15■□□□□ 0.98
ITGB1-210ENST00000474568 DCAF8L1A6NGE4 600 aa21.14■□□□□ 0.97
ITGB1-210ENST00000474568 MYH14Q7Z406 1995 aaKnown RBP21.14■□□□□ 0.97
ITGB1-210ENST00000474568 COL24A1Q17RW2 1714 aa21.13■□□□□ 0.97
ITGB1-210ENST00000474568 STARD3NLO95772 234 aa21.13■□□□□ 0.97
ITGB1-210ENST00000474568 MMP10P09238 476 aa21.13■□□□□ 0.97
ITGB1-210ENST00000474568 GYS1P13807 737 aa21.13■□□□□ 0.97
ITGB1-210ENST00000474568 RIPK4P57078 832 aa21.13■□□□□ 0.97
ITGB1-210ENST00000474568 TAF7Q15545 349 aaPredicted RBP21.13■□□□□ 0.97
ITGB1-210ENST00000474568 NEUROD2Q15784 382 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms