RNA–Protein interactions for RNA: ENST00000474548.1

MRPL38-206, Transcript of mitochondrial ribosomal protein L38, humanhuman

TSL 2

Gene MRPL38, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL38-206ENST00000474548 KDM6AO15550 1401 aaPredicted RBP22.23■■□□□ 1.15
MRPL38-206ENST00000474548 BTBD11A6QL63 1104 aa22.23■■□□□ 1.15
MRPL38-206ENST00000474548 NFATC2IPQ8NCF5 419 aa22.23■■□□□ 1.15
MRPL38-206ENST00000474548 RGS12O14924 1447 aa22.23■■□□□ 1.15
MRPL38-206ENST00000474548 SENP3-EIF4A1A0A087X0R7 540 aa22.22■■□□□ 1.15
MRPL38-206ENST00000474548 ZNF428Q96B54 188 aa22.22■■□□□ 1.15
MRPL38-206ENST00000474548 THUMPD2Q9BTF0 503 aaKnown RBP22.22■■□□□ 1.15
MRPL38-206ENST00000474548 TMOD3Q9NYL9 352 aa22.22■■□□□ 1.15
MRPL38-206ENST00000474548 TSPYL4Q9UJ04 414 aa22.22■■□□□ 1.15
MRPL38-206ENST00000474548 SHANK3Q9BYB0 1731 aa22.21■■□□□ 1.15
MRPL38-206ENST00000474548 SCN11AQ9UI33 1791 aa22.21■■□□□ 1.15
MRPL38-206ENST00000474548 DUSP27Q5VZP5 1158 aa22.21■■□□□ 1.15
MRPL38-206ENST00000474548 LAS1LQ9Y4W2 734 aaKnown RBP22.21■■□□□ 1.15
MRPL38-206ENST00000474548 MRC1P22897 1456 aa22.21■■□□□ 1.15
MRPL38-206ENST00000474548 HMGB2P26583 209 aaKnown RBP22.2■■□□□ 1.14
MRPL38-206ENST00000474548 CDCA7LQ96GN5 454 aa22.2■■□□□ 1.14
MRPL38-206ENST00000474548 MBIPQ9NS73 344 aa22.19■■□□□ 1.14
MRPL38-206ENST00000474548 TTC5Q8N0Z6 440 aa22.18■■□□□ 1.14
MRPL38-206ENST00000474548 FANCIQ9NVI1 1328 aa22.17■■□□□ 1.14
MRPL38-206ENST00000474548 ZNF790Q6PG37 636 aa22.17■■□□□ 1.14
MRPL38-206ENST00000474548 SPINK5Q9NQ38 1064 aaPredicted RBP22.17■■□□□ 1.14
MRPL38-206ENST00000474548 HOXB7P09629 217 aa22.16■■□□□ 1.14
MRPL38-206ENST00000474548 PRIM1P49642 420 aaKnown RBP22.16■■□□□ 1.14
MRPL38-206ENST00000474548 SMARCC1Q92922 1105 aaPredicted RBP22.16■■□□□ 1.14
MRPL38-206ENST00000474548 PIGBQ92521 554 aa22.14■■□□□ 1.13
MRPL38-206ENST00000474548 SYTL4Q96C24 671 aaPredicted RBP22.13■■□□□ 1.13
MRPL38-206ENST00000474548 FMNL2Q96PY5 1086 aa22.13■■□□□ 1.13
MRPL38-206ENST00000474548 BCL11BQ9C0K0 894 aaPredicted RBP22.13■■□□□ 1.13
MRPL38-206ENST00000474548 EIF4A1P60842 406 aaKnown RBP22.12■■□□□ 1.13
MRPL38-206ENST00000474548 VSIG10Q8N0Z9 540 aa22.12■■□□□ 1.13
MRPL38-206ENST00000474548 TSR2Q969E8 191 aaKnown RBP22.12■■□□□ 1.13
MRPL38-206ENST00000474548 TEX13AQ9BXU3 409 aaPredicted RBP22.12■■□□□ 1.13
MRPL38-206ENST00000474548 EXOSC9Q06265 439 aaKnown RBP22.11■■□□□ 1.13
MRPL38-206ENST00000474548 SIPA1L3O60292 1781 aaPredicted RBP22.1■■□□□ 1.13
MRPL38-206ENST00000474548 MIS18AQ9NYP9 233 aa22.1■■□□□ 1.13
MRPL38-206ENST00000474548 VIRMAQ69YN4 1812 aaKnown RBP22.1■■□□□ 1.13
MRPL38-206ENST00000474548 TWISTNBQ3B726 338 aaPredicted RBP22.09■■□□□ 1.13
MRPL38-206ENST00000474548 SNRPA1P09661 255 aaKnown RBP22.08■■□□□ 1.13
MRPL38-206ENST00000474548 ACSBG1Q96GR2 724 aa22.08■■□□□ 1.13
MRPL38-206ENST00000474548 ATG3Q9NT62 314 aa22.08■■□□□ 1.13
MRPL38-206ENST00000474548 HEG1Q9ULI3 1381 aa22.08■■□□□ 1.12
MRPL38-206ENST00000474548 ALDH1L2Q3SY69 923 aa22.07■■□□□ 1.12
MRPL38-206ENST00000474548 VAMP4O75379 141 aa22.06■■□□□ 1.12
MRPL38-206ENST00000474548 GIGYF1O75420 1035 aaPredicted RBP22.06■■□□□ 1.12
MRPL38-206ENST00000474548 SLC39A6Q13433 755 aa22.05■■□□□ 1.12
MRPL38-206ENST00000474548 KDM3BQ7LBC6 1761 aa22.04■■□□□ 1.12
MRPL38-206ENST00000474548 ITGB4P16144 1822 aa22.04■■□□□ 1.12
MRPL38-206ENST00000474548 TOGARAM1Q9Y4F4 1720 aa22.04■■□□□ 1.12
MRPL38-206ENST00000474548 CCDC30Q5VVM6 783 aa22.04■■□□□ 1.12
MRPL38-206ENST00000474548 C8orf58Q8NAV2 365 aa22.04■■□□□ 1.12
MRPL38-206ENST00000474548 ZNF496Q96IT1 587 aaPredicted RBP22.04■■□□□ 1.12
MRPL38-206ENST00000474548 RCAN3Q9UKA8 241 aa22.04■■□□□ 1.12
MRPL38-206ENST00000474548 ASAP1Q9ULH1 1129 aa22.04■■□□□ 1.12
MRPL38-206ENST00000474548 BRWD3Q6RI45 1802 aa22.03■■□□□ 1.12
MRPL38-206ENST00000474548 KAT6BQ8WYB5 2073 aa22.03■■□□□ 1.12
MRPL38-206ENST00000474548 DOT1LQ8TEK3 1739 aa22.03■■□□□ 1.12
MRPL38-206ENST00000474548 KCNQ2O43526 872 aa22.03■■□□□ 1.12
MRPL38-206ENST00000474548 BRPF1P55201 1214 aaPredicted RBP22.03■■□□□ 1.12
MRPL38-206ENST00000474548 NHSQ6T4R5 1651 aa22.02■■□□□ 1.12
MRPL38-206ENST00000474548 KCNQ3O43525 872 aa22.02■■□□□ 1.12
MRPL38-206ENST00000474548 CCDC125Q86Z20 511 aa22.02■■□□□ 1.12
MRPL38-206ENST00000474548 ERBB4Q15303 1308 aa22.02■■□□□ 1.12
MRPL38-206ENST00000474548 STARD3NLO95772 234 aa22.01■■□□□ 1.11
MRPL38-206ENST00000474548 FAM182BQ5T319 152 aa22.01■■□□□ 1.11
MRPL38-206ENST00000474548 EP400Q96L91 3159 aa22■■□□□ 1.11
MRPL38-206ENST00000474548 PLSCR1O15162 318 aa22■■□□□ 1.11
MRPL38-206ENST00000474548 GOLGA6L2Q8N9W4 650 aaPredicted RBP22■■□□□ 1.11
MRPL38-206ENST00000474548 STK31Q9BXU1 1019 aa22■■□□□ 1.11
MRPL38-206ENST00000474548 PALLDQ8WX93 1383 aa21.99■■□□□ 1.11
MRPL38-206ENST00000474548 PTCD1O75127 700 aaKnown RBP21.99■■□□□ 1.11
MRPL38-206ENST00000474548 RARSP54136 660 aaKnown RBP21.99■■□□□ 1.11
MRPL38-206ENST00000474548 TSPYL6Q8N831 410 aa21.99■■□□□ 1.11
MRPL38-206ENST00000474548 PAPPAQ13219 1627 aa21.98■■□□□ 1.11
MRPL38-206ENST00000474548 LOC102724428A0A0B4J2F2 783 aa21.98■■□□□ 1.11
MRPL38-206ENST00000474548 ELL2O00472 640 aaPredicted RBP21.98■■□□□ 1.11
MRPL38-206ENST00000474548 TRIM37O94972 964 aa21.98■■□□□ 1.11
MRPL38-206ENST00000474548 SIK1P57059 783 aa21.98■■□□□ 1.11
MRPL38-206ENST00000474548 HDGFL1Q5TGJ6 251 aa21.98■■□□□ 1.11
MRPL38-206ENST00000474548 RBM42Q9BTD8 480 aaKnown RBP21.98■■□□□ 1.11
MRPL38-206ENST00000474548 DBF4Q9UBU7 674 aaPredicted RBP21.98■■□□□ 1.11
MRPL38-206ENST00000474548 SBF2Q86WG5 1849 aa21.97■■□□□ 1.11
MRPL38-206ENST00000474548 SLC27A3Q5K4L6 730 aa21.97■■□□□ 1.11
MRPL38-206ENST00000474548 IPO8O15397 1037 aaKnown RBP21.96■■□□□ 1.11
MRPL38-206ENST00000474548 UBR2Q8IWV8 1755 aa21.96■■□□□ 1.11
MRPL38-206ENST00000474548 KCPQ6ZWJ8 1503 aa21.96■■□□□ 1.11
MRPL38-206ENST00000474548 MS4A1P11836 297 aa21.95■■□□□ 1.1
MRPL38-206ENST00000474548 ATP6V1AP38606 617 aa21.95■■□□□ 1.1
MRPL38-206ENST00000474548 SF3B2Q13435 895 aaKnown RBP21.95■■□□□ 1.1
MRPL38-206ENST00000474548 KIF16BQ96L93 1317 aa21.95■■□□□ 1.1
MRPL38-206ENST00000474548 ZNF831Q5JPB2 1677 aa21.95■■□□□ 1.1
MRPL38-206ENST00000474548 KRT24Q2M2I5 525 aa21.94■■□□□ 1.1
MRPL38-206ENST00000474548 ARHGAP45Q92619 1136 aa21.94■■□□□ 1.1
MRPL38-206ENST00000474548 HYPKQ9NX55 129 aa21.94■■□□□ 1.1
MRPL38-206ENST00000474548 EIF2S2P20042 333 aaKnown RBP21.93■■□□□ 1.1
MRPL38-206ENST00000474548 DDX21Q9NR30 783 aaKnown RBP eCLIP21.93■■□□□ 1.1
MRPL38-206ENST00000474548 SMC4Q9NTJ3 1288 aa21.93■■□□□ 1.1
MRPL38-206ENST00000474548 SSH1Q8WYL5 1049 aa21.92■■□□□ 1.1
MRPL38-206ENST00000474548 USP16Q9Y5T5 823 aa21.92■■□□□ 1.1
MRPL38-206ENST00000474548 PTPRCP08575 1304 aa21.91■■□□□ 1.1
MRPL38-206ENST00000474548 APBA3O96018 575 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms