RNA–Protein interactions for RNA: ENST00000474344.1

VANGL1-205, Transcript of VANGL planar cell polarity protein 1, humanhuman

TSL 2

Gene VANGL1, Length 461 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-205ENST00000474344 TMPOP42166 694 aaKnown RBP13.82□□□□□ -0.2
VANGL1-205ENST00000474344 NFATC2IPQ8NCF5 419 aa13.82□□□□□ -0.2
VANGL1-205ENST00000474344 SLC52A2Q9HAB3 445 aa13.82□□□□□ -0.2
VANGL1-205ENST00000474344 TMOD3Q9NYL9 352 aa13.82□□□□□ -0.2
VANGL1-205ENST00000474344 SRCAPQ6ZRS2 3230 aa13.82□□□□□ -0.2
VANGL1-205ENST00000474344 COL5A3P25940 1745 aaPredicted RBP13.81□□□□□ -0.2
VANGL1-205ENST00000474344 KDM3BQ7LBC6 1761 aa13.81□□□□□ -0.2
VANGL1-205ENST00000474344 CCER2I3L3R5 266 aa13.81□□□□□ -0.2
VANGL1-205ENST00000474344 TXNRD1Q16881 649 aa13.81□□□□□ -0.2
VANGL1-205ENST00000474344 CCDC146Q8IYE0 955 aa13.81□□□□□ -0.2
VANGL1-205ENST00000474344 ATG3Q9NT62 314 aa13.81□□□□□ -0.2
VANGL1-205ENST00000474344 LRRC4BQ9NT99 713 aa13.81□□□□□ -0.2
VANGL1-205ENST00000474344 ASAP1Q9ULH1 1129 aa13.81□□□□□ -0.2
VANGL1-205ENST00000474344 C5P01031 1676 aa13.81□□□□□ -0.2
VANGL1-205ENST00000474344 QSER1Q2KHR3 1735 aa13.81□□□□□ -0.2
VANGL1-205ENST00000474344 CABP4P57796 275 aa13.8□□□□□ -0.2
VANGL1-205ENST00000474344 TJP1Q07157 1748 aa13.79□□□□□ -0.2
VANGL1-205ENST00000474344 UBR3Q6ZT12 1888 aa13.79□□□□□ -0.2
VANGL1-205ENST00000474344 MIER1Q8N108 512 aa13.79□□□□□ -0.2
VANGL1-205ENST00000474344 MAPK8IP3Q9UPT6 1336 aa13.79□□□□□ -0.2
VANGL1-205ENST00000474344 NEFMP07197 916 aa13.78□□□□□ -0.2
VANGL1-205ENST00000474344 DCTN1Q14203 1278 aa13.78□□□□□ -0.2
VANGL1-205ENST00000474344 MCM10Q7L590 875 aa13.78□□□□□ -0.2
VANGL1-205ENST00000474344 SMARCC1Q92922 1105 aaPredicted RBP13.78□□□□□ -0.2
VANGL1-205ENST00000474344 SLC4A9Q96Q91 983 aa13.78□□□□□ -0.2
VANGL1-205ENST00000474344 TRIM35Q9UPQ4 493 aa13.78□□□□□ -0.2
VANGL1-205ENST00000474344 PALLDQ8WX93 1383 aa13.78□□□□□ -0.2
VANGL1-205ENST00000474344 KCPQ6ZWJ8 1503 aa13.78□□□□□ -0.2
VANGL1-205ENST00000474344 APAF1O14727 1248 aa13.77□□□□□ -0.21
VANGL1-205ENST00000474344 RIPK4P57078 832 aa13.77□□□□□ -0.21
VANGL1-205ENST00000474344 SLC27A3Q5K4L6 730 aa13.77□□□□□ -0.21
VANGL1-205ENST00000474344 NCBP3Q53F19 620 aaKnown RBP13.76□□□□□ -0.21
VANGL1-205ENST00000474344 C4BP0C0L5 1744 aa13.76□□□□□ -0.21
VANGL1-205ENST00000474344 LOC102724428A0A0B4J2F2 783 aa13.75□□□□□ -0.21
VANGL1-205ENST00000474344 KCNQ4P56696 695 aa13.75□□□□□ -0.21
VANGL1-205ENST00000474344 SIK1P57059 783 aa13.75□□□□□ -0.21
VANGL1-205ENST00000474344 TEFQ10587 303 aa13.75□□□□□ -0.21
VANGL1-205ENST00000474344 SLC39A6Q13433 755 aa13.75□□□□□ -0.21
VANGL1-205ENST00000474344 RTF1Q92541 710 aaKnown RBP13.75□□□□□ -0.21
VANGL1-205ENST00000474344 THUMPD2Q9BTF0 503 aaKnown RBP13.75□□□□□ -0.21
VANGL1-205ENST00000474344 ANO8Q9HCE9 1232 aaPredicted RBP13.75□□□□□ -0.21
VANGL1-205ENST00000474344 RRP7AQ9Y3A4 280 aaKnown RBP13.75□□□□□ -0.21
VANGL1-205ENST00000474344 CASZ1Q86V15 1759 aa13.74□□□□□ -0.21
VANGL1-205ENST00000474344 CCNL1Q9UK58 526 aaPredicted RBP13.74□□□□□ -0.21
VANGL1-205ENST00000474344 ITPK1Q13572 414 aa13.73□□□□□ -0.21
VANGL1-205ENST00000474344 TAF7Q15545 349 aaPredicted RBP13.73□□□□□ -0.21
VANGL1-205ENST00000474344 ZNF790Q6PG37 636 aa13.73□□□□□ -0.21
VANGL1-205ENST00000474344 FAM9BQ8IZU0 186 aa13.73□□□□□ -0.21
VANGL1-205ENST00000474344 AKT1S1Q96B36 256 aa13.73□□□□□ -0.21
VANGL1-205ENST00000474344 KCNQ3O43525 872 aa13.72□□□□□ -0.21
VANGL1-205ENST00000474344 LMOD3Q0VAK6 560 aa13.72□□□□□ -0.21
VANGL1-205ENST00000474344 NEUROD2Q15784 382 aa13.72□□□□□ -0.21
VANGL1-205ENST00000474344 COL24A1Q17RW2 1714 aa13.72□□□□□ -0.21
VANGL1-205ENST00000474344 HEG1Q9ULI3 1381 aa13.71□□□□□ -0.21
VANGL1-205ENST00000474344 PTCD1O75127 700 aaKnown RBP13.71□□□□□ -0.21
VANGL1-205ENST00000474344 ZNF827Q17R98 1081 aa13.71□□□□□ -0.21
VANGL1-205ENST00000474344 CCDC27Q2M243 656 aa13.71□□□□□ -0.21
VANGL1-205ENST00000474344 ZNF496Q96IT1 587 aaPredicted RBP13.71□□□□□ -0.21
VANGL1-205ENST00000474344 LAMB4A4D0S4 1761 aa13.71□□□□□ -0.22
VANGL1-205ENST00000474344 BTBD11A6QL63 1104 aa13.7□□□□□ -0.22
VANGL1-205ENST00000474344 ATP6V1AP38606 617 aa13.7□□□□□ -0.22
VANGL1-205ENST00000474344 SLC15A2Q16348 729 aa13.7□□□□□ -0.22
VANGL1-205ENST00000474344 VSIG10Q8N0Z9 540 aa13.7□□□□□ -0.22
VANGL1-205ENST00000474344 LINC00116Q8NCU8 138 aa13.7□□□□□ -0.22
VANGL1-205ENST00000474344 RBM42Q9BTD8 480 aaKnown RBP13.7□□□□□ -0.22
VANGL1-205ENST00000474344 BABAM1Q9NWV8 329 aa13.7□□□□□ -0.22
VANGL1-205ENST00000474344 CHL1O00533 1208 aa13.69□□□□□ -0.22
VANGL1-205ENST00000474344 ZNF853P0CG23 659 aa13.69□□□□□ -0.22
VANGL1-205ENST00000474344 NBPF14Q5TI25 921 aa13.69□□□□□ -0.22
VANGL1-205ENST00000474344 MIS18AQ9NYP9 233 aa13.69□□□□□ -0.22
VANGL1-205ENST00000474344 CACNA1FO60840 1977 aa13.69□□□□□ -0.22
VANGL1-205ENST00000474344 C4AP0C0L4 1744 aa13.68□□□□□ -0.22
VANGL1-205ENST00000474344 HMGB2P26583 209 aaKnown RBP13.68□□□□□ -0.22
VANGL1-205ENST00000474344 RC3H1Q5TC82 1133 aaKnown RBP13.68□□□□□ -0.22
VANGL1-205ENST00000474344 WWC1Q8IX03 1113 aa13.68□□□□□ -0.22
VANGL1-205ENST00000474344 R3HDM1Q15032 1099 aaKnown RBP13.67□□□□□ -0.22
VANGL1-205ENST00000474344 AMIGO3Q86WK7 504 aa13.67□□□□□ -0.22
VANGL1-205ENST00000474344 DNAJC10Q8IXB1 793 aa13.67□□□□□ -0.22
VANGL1-205ENST00000474344 NGEFQ8N5V2 710 aa13.67□□□□□ -0.22
VANGL1-205ENST00000474344 ZNF521Q96K83 1311 aa13.66□□□□□ -0.22
VANGL1-205ENST00000474344 CNTNAP4Q9C0A0 1308 aa13.66□□□□□ -0.22
VANGL1-205ENST00000474344 CYP19A1P11511 503 aaPredicted RBP13.66□□□□□ -0.22
VANGL1-205ENST00000474344 EIF4A1P60842 406 aaKnown RBP13.66□□□□□ -0.22
VANGL1-205ENST00000474344 TTC5Q8N0Z6 440 aa13.66□□□□□ -0.22
VANGL1-205ENST00000474344 CFAP44Q96MT7 982 aa13.66□□□□□ -0.22
VANGL1-205ENST00000474344 FMNL2Q96PY5 1086 aa13.66□□□□□ -0.22
VANGL1-205ENST00000474344 PDGFDQ9GZP0 370 aaPredicted RBP13.66□□□□□ -0.22
VANGL1-205ENST00000474344 STK32BQ9NY57 414 aa13.66□□□□□ -0.22
VANGL1-205ENST00000474344 SENP3-EIF4A1A0A087X0R7 540 aa13.65□□□□□ -0.22
VANGL1-205ENST00000474344 PSDA5PKW4 1024 aaPredicted RBP13.65□□□□□ -0.22
VANGL1-205ENST00000474344 INTS5Q6P9B9 1019 aaKnown RBP13.65□□□□□ -0.22
VANGL1-205ENST00000474344 PNPLA7Q6ZV29 1317 aa13.64□□□□□ -0.23
VANGL1-205ENST00000474344 PRAMEF22A3QJZ6 481 aa13.64□□□□□ -0.23
VANGL1-205ENST00000474344 GIGYF1O75420 1035 aaPredicted RBP13.64□□□□□ -0.23
VANGL1-205ENST00000474344 CRKLP46109 303 aaKnown RBP13.64□□□□□ -0.23
VANGL1-205ENST00000474344 IFT57Q9NWB7 429 aa13.64□□□□□ -0.23
VANGL1-205ENST00000474344 IL16Q14005 1332 aa13.64□□□□□ -0.23
VANGL1-205ENST00000474344 WDR63Q8IWG1 891 aa13.63□□□□□ -0.23
VANGL1-205ENST00000474344 TEX13AQ9BXU3 409 aaPredicted RBP13.63□□□□□ -0.23
VANGL1-205ENST00000474344 TSPYL4Q9UJ04 414 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms