RNA–Protein interactions for RNA: ENST00000474336.5

PKNOX1-205, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-205ENST00000474336 SYNMO15061 1565 aa10.88□□□□□ -0.67
PKNOX1-205ENST00000474336 CCNYL3P0C7X3 344 aa10.88□□□□□ -0.67
PKNOX1-205ENST00000474336 CLCN1P35523 988 aa10.88□□□□□ -0.67
PKNOX1-205ENST00000474336 MS4A1P11836 297 aa10.87□□□□□ -0.67
PKNOX1-205ENST00000474336 PIK3C2BO00750 1634 aa10.87□□□□□ -0.67
PKNOX1-205ENST00000474336 PLA2R1Q13018 1463 aa10.87□□□□□ -0.67
PKNOX1-205ENST00000474336 IFT172Q9UG01 1749 aa10.87□□□□□ -0.67
PKNOX1-205ENST00000474336 C6orf229H3BNL8 230 aa10.86□□□□□ -0.67
PKNOX1-205ENST00000474336 FDX1P10109 184 aa10.86□□□□□ -0.67
PKNOX1-205ENST00000474336 PLEKHG3A1L390 1219 aa10.85□□□□□ -0.67
PKNOX1-205ENST00000474336 CCDC102AQ96A19 550 aa10.85□□□□□ -0.67
PKNOX1-205ENST00000474336 UNC93B1Q9H1C4 597 aa10.85□□□□□ -0.67
PKNOX1-205ENST00000474336 EVA1BQ9NVM1 165 aa10.85□□□□□ -0.67
PKNOX1-205ENST00000474336 PCDHGC3Q9UN70 934 aa10.85□□□□□ -0.67
PKNOX1-205ENST00000474336 PTPRTO14522 1441 aa10.84□□□□□ -0.67
PKNOX1-205ENST00000474336 ARHGAP31Q2M1Z3 1444 aa10.84□□□□□ -0.67
PKNOX1-205ENST00000474336 CNTLNQ9NXG0 1405 aa10.84□□□□□ -0.67
PKNOX1-205ENST00000474336 PTPRNQ16849 979 aa10.84□□□□□ -0.67
PKNOX1-205ENST00000474336 MPNDQ8N594 471 aa10.84□□□□□ -0.67
PKNOX1-205ENST00000474336 ERVK-7P63135 1459 aa10.84□□□□□ -0.67
PKNOX1-205ENST00000474336 PPLO60437 1756 aa10.84□□□□□ -0.67
PKNOX1-205ENST00000474336 ADAMTSL3P82987 1691 aa10.83□□□□□ -0.68
PKNOX1-205ENST00000474336 SPATA31D1Q6ZQQ2 1576 aa10.83□□□□□ -0.68
PKNOX1-205ENST00000474336 VARSP26640 1264 aaKnown RBP10.83□□□□□ -0.68
PKNOX1-205ENST00000474336 PLCB2Q00722 1185 aa10.83□□□□□ -0.68
PKNOX1-205ENST00000474336 BAP1Q92560 729 aa10.83□□□□□ -0.68
PKNOX1-205ENST00000474336 TIMELESSQ9UNS1 1208 aa10.83□□□□□ -0.68
PKNOX1-205ENST00000474336 TLL2Q9Y6L7 1015 aa10.83□□□□□ -0.68
PKNOX1-205ENST00000474336 TULP1O00294 542 aaPredicted RBP10.82□□□□□ -0.68
PKNOX1-205ENST00000474336 NNTQ13423 1086 aa10.82□□□□□ -0.68
PKNOX1-205ENST00000474336 SCARF1Q14162 830 aa10.82□□□□□ -0.68
PKNOX1-205ENST00000474336 LINC01559Q495D7 138 aa10.82□□□□□ -0.68
PKNOX1-205ENST00000474336 MRPL14Q6P1L8 145 aaKnown RBP10.82□□□□□ -0.68
PKNOX1-205ENST00000474336 KRI1Q8N9T8 703 aaKnown RBP10.82□□□□□ -0.68
PKNOX1-205ENST00000474336 ADGRB3O60242 1522 aa10.82□□□□□ -0.68
PKNOX1-205ENST00000474336 NOS1P29475 1434 aa10.82□□□□□ -0.68
PKNOX1-205ENST00000474336 KCNH2Q12809 1159 aa10.81□□□□□ -0.68
PKNOX1-205ENST00000474336 RGL3Q3MIN7 710 aa10.81□□□□□ -0.68
PKNOX1-205ENST00000474336 ZNF326Q5BKZ1 582 aaKnown RBP10.81□□□□□ -0.68
PKNOX1-205ENST00000474336 L3MBTL2Q969R5 705 aa10.81□□□□□ -0.68
PKNOX1-205ENST00000474336 MYO3AQ8NEV4 1616 aa10.8□□□□□ -0.68
PKNOX1-205ENST00000474336 LOC100996750A0A140TA64 210 aa10.8□□□□□ -0.68
PKNOX1-205ENST00000474336 ZNF511Q8NB15 262 aa10.8□□□□□ -0.68
PKNOX1-205ENST00000474336 KRTAP4-6Q9BYQ5 205 aa10.8□□□□□ -0.68
PKNOX1-205ENST00000474336 NEURL4Q96JN8 1562 aa10.8□□□□□ -0.68
PKNOX1-205ENST00000474336 TMEM131LA2VDJ0 1609 aa10.8□□□□□ -0.68
PKNOX1-205ENST00000474336 TRPM1Q7Z4N2 1603 aa10.8□□□□□ -0.68
PKNOX1-205ENST00000474336 ZMYM3Q14202 1370 aa10.79□□□□□ -0.68
PKNOX1-205ENST00000474336 PURBQ96QR8 312 aaKnown RBP10.79□□□□□ -0.68
PKNOX1-205ENST00000474336 UBR1Q8IWV7 1749 aa10.78□□□□□ -0.68
PKNOX1-205ENST00000474336 SPATA31E1Q6ZUB1 1445 aa10.78□□□□□ -0.68
PKNOX1-205ENST00000474336 FBXO31Q5XUX0 539 aaPredicted RBP10.78□□□□□ -0.68
PKNOX1-205ENST00000474336 KDM2AQ9Y2K7 1162 aa10.78□□□□□ -0.68
PKNOX1-205ENST00000474336 KDM5AP29375 1690 aaKnown RBP10.77□□□□□ -0.69
PKNOX1-205ENST00000474336 PPP1R15AO75807 674 aaPredicted RBP10.77□□□□□ -0.69
PKNOX1-205ENST00000474336 ADH1CP00326 375 aa10.77□□□□□ -0.69
PKNOX1-205ENST00000474336 VSIG8P0DPA2 414 aa10.77□□□□□ -0.69
PKNOX1-205ENST00000474336 TIMP2P16035 220 aa10.77□□□□□ -0.69
PKNOX1-205ENST00000474336 WDR4P57081 412 aaKnown RBP10.77□□□□□ -0.69
PKNOX1-205ENST00000474336 DCAF11Q8TEB1 546 aa10.77□□□□□ -0.69
PKNOX1-205ENST00000474336 DESI1Q6ICB0 168 aa10.76□□□□□ -0.69
PKNOX1-205ENST00000474336 PRR7Q8TB68 274 aa10.76□□□□□ -0.69
PKNOX1-205ENST00000474336 SPIRE2Q8WWL2 714 aa10.76□□□□□ -0.69
PKNOX1-205ENST00000474336 TNRQ92752 1358 aa10.76□□□□□ -0.69
PKNOX1-205ENST00000474336 KIAA1210Q9ULL0 1709 aa10.75□□□□□ -0.69
PKNOX1-205ENST00000474336 NEXMIFQ5QGS0 1516 aa10.74□□□□□ -0.69
PKNOX1-205ENST00000474336 LAMC1P11047 1609 aa10.74□□□□□ -0.69
PKNOX1-205ENST00000474336 ZNF142P52746 1687 aaPredicted RBP10.74□□□□□ -0.69
PKNOX1-205ENST00000474336 SPDYE5A6NIY4 337 aa10.74□□□□□ -0.69
PKNOX1-205ENST00000474336 SOBPA7XYQ1 873 aa10.74□□□□□ -0.69
PKNOX1-205ENST00000474336 NDUFV2P19404 249 aa10.74□□□□□ -0.69
PKNOX1-205ENST00000474336 SSTR3P32745 418 aaPredicted RBP10.74□□□□□ -0.69
PKNOX1-205ENST00000474336 CEBPAP49715 358 aaPredicted RBP10.74□□□□□ -0.69
PKNOX1-205ENST00000474336 KLF16Q9BXK1 252 aaPredicted RBP10.74□□□□□ -0.69
PKNOX1-205ENST00000474336 SLC52A1Q9NWF4 448 aa10.74□□□□□ -0.69
PKNOX1-205ENST00000474336 MYOM2P54296 1465 aa10.74□□□□□ -0.69
PKNOX1-205ENST00000474336 RALGAPBQ86X10 1494 aa10.74□□□□□ -0.69
PKNOX1-205ENST00000474336 POLR1AO95602 1720 aaPredicted RBP10.73□□□□□ -0.69
PKNOX1-205ENST00000474336 MTMR2Q13614 643 aa10.73□□□□□ -0.69
PKNOX1-205ENST00000474336 FAM174AQ8TBP5 190 aa10.73□□□□□ -0.69
PKNOX1-205ENST00000474336 PRAG1Q86YV5 1406 aa10.73□□□□□ -0.69
PKNOX1-205ENST00000474336 MOXD2PA6NHM9 499 aa10.72□□□□□ -0.69
PKNOX1-205ENST00000474336 IDI1Q13907 227 aa10.72□□□□□ -0.69
PKNOX1-205ENST00000474336 UHRF1BP1Q6BDS2 1440 aa10.72□□□□□ -0.69
PKNOX1-205ENST00000474336 CEP170BQ9Y4F5 1589 aaPredicted RBP10.72□□□□□ -0.69
PKNOX1-205ENST00000474336 IQGAP1P46940 1657 aa10.71□□□□□ -0.69
PKNOX1-205ENST00000474336 NBPF8Q3BBV2 869 aa10.71□□□□□ -0.69
PKNOX1-205ENST00000474336 NLRP1Q9C000 1473 aa10.71□□□□□ -0.69
PKNOX1-205ENST00000474336 SETD1BQ9UPS6 1966 aaKnown RBP10.71□□□□□ -0.69
PKNOX1-205ENST00000474336 A2ML1A8K2U0 1454 aa10.7□□□□□ -0.7
PKNOX1-205ENST00000474336 CDK15Q96Q40 435 aa10.7□□□□□ -0.7
PKNOX1-205ENST00000474336 PTPRMP28827 1452 aa10.69□□□□□ -0.7
PKNOX1-205ENST00000474336 ROCK2O75116 1388 aaKnown RBP10.69□□□□□ -0.7
PKNOX1-205ENST00000474336 CTHP32929 405 aa10.69□□□□□ -0.7
PKNOX1-205ENST00000474336 NUTM2DQ5VT03 806 aaPredicted RBP10.69□□□□□ -0.7
PKNOX1-205ENST00000474336 MAN1A2O60476 641 aa10.68□□□□□ -0.7
PKNOX1-205ENST00000474336 ZIC2O95409 532 aaPredicted RBP10.68□□□□□ -0.7
PKNOX1-205ENST00000474336 KCNMA1Q12791 1236 aa10.68□□□□□ -0.7
PKNOX1-205ENST00000474336 SUZ12Q15022 739 aaKnown RBP10.68□□□□□ -0.7
PKNOX1-205ENST00000474336 RPGRIP1LQ68CZ1 1315 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms