RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 SALL2Q9Y467 1007 aaPredicted RBP13.65□□□□□ -0.22
CASC3-204ENST00000474190 NHSQ6T4R5 1651 aa13.64□□□□□ -0.23
CASC3-204ENST00000474190 CHL1O00533 1208 aa13.64□□□□□ -0.23
CASC3-204ENST00000474190 MIS18AQ9NYP9 233 aa13.64□□□□□ -0.23
CASC3-204ENST00000474190 HEG1Q9ULI3 1381 aa13.63□□□□□ -0.23
CASC3-204ENST00000474190 CABP4P57796 275 aa13.63□□□□□ -0.23
CASC3-204ENST00000474190 SLC39A6Q13433 755 aa13.63□□□□□ -0.23
CASC3-204ENST00000474190 DOT1LQ8TEK3 1739 aa13.63□□□□□ -0.23
CASC3-204ENST00000474190 TNS1Q9HBL0 1735 aaKnown RBP13.63□□□□□ -0.23
CASC3-204ENST00000474190 SCN11AQ9UI33 1791 aa13.63□□□□□ -0.23
CASC3-204ENST00000474190 NEFMP07197 916 aa13.62□□□□□ -0.23
CASC3-204ENST00000474190 TAF7Q15545 349 aaPredicted RBP13.62□□□□□ -0.23
CASC3-204ENST00000474190 TRMT2AQ8IZ69 625 aaKnown RBP13.62□□□□□ -0.23
CASC3-204ENST00000474190 NGEFQ8N5V2 710 aa13.62□□□□□ -0.23
CASC3-204ENST00000474190 RTF1Q92541 710 aaKnown RBP13.62□□□□□ -0.23
CASC3-204ENST00000474190 TMOD3Q9NYL9 352 aa13.62□□□□□ -0.23
CASC3-204ENST00000474190 KCPQ6ZWJ8 1503 aa13.62□□□□□ -0.23
CASC3-204ENST00000474190 DLG5Q8TDM6 1919 aa13.62□□□□□ -0.23
CASC3-204ENST00000474190 SBF2Q86WG5 1849 aa13.62□□□□□ -0.23
CASC3-204ENST00000474190 LMOD3Q0VAK6 560 aa13.61□□□□□ -0.23
CASC3-204ENST00000474190 WDR63Q8IWG1 891 aa13.61□□□□□ -0.23
CASC3-204ENST00000474190 SYTL4Q96C24 671 aaPredicted RBP13.61□□□□□ -0.23
CASC3-204ENST00000474190 CDCA7LQ96GN5 454 aa13.61□□□□□ -0.23
CASC3-204ENST00000474190 CAMKK2Q96RR4 588 aa13.61□□□□□ -0.23
CASC3-204ENST00000474190 IL16Q14005 1332 aa13.61□□□□□ -0.23
CASC3-204ENST00000474190 SIPA1L3O60292 1781 aaPredicted RBP13.6□□□□□ -0.23
CASC3-204ENST00000474190 ZNF790Q6PG37 636 aa13.6□□□□□ -0.23
CASC3-204ENST00000474190 CFAP44Q96MT7 982 aa13.6□□□□□ -0.23
CASC3-204ENST00000474190 MBIPQ9NS73 344 aa13.6□□□□□ -0.23
CASC3-204ENST00000474190 LRRC4BQ9NT99 713 aa13.6□□□□□ -0.23
CASC3-204ENST00000474190 PAPPAQ13219 1627 aa13.6□□□□□ -0.23
CASC3-204ENST00000474190 PLSCR1O15162 318 aa13.59□□□□□ -0.23
CASC3-204ENST00000474190 HNRNPUQ00839 825 aaKnown RBP eCLIP13.59□□□□□ -0.23
CASC3-204ENST00000474190 TEFQ10587 303 aa13.59□□□□□ -0.23
CASC3-204ENST00000474190 KRT24Q2M2I5 525 aa13.59□□□□□ -0.23
CASC3-204ENST00000474190 ZNF496Q96IT1 587 aaPredicted RBP13.59□□□□□ -0.23
CASC3-204ENST00000474190 IFT57Q9NWB7 429 aa13.59□□□□□ -0.23
CASC3-204ENST00000474190 PALLDQ8WX93 1383 aa13.58□□□□□ -0.23
CASC3-204ENST00000474190 PRAMEF22A3QJZ6 481 aa13.58□□□□□ -0.24
CASC3-204ENST00000474190 BTBD11A6QL63 1104 aa13.58□□□□□ -0.24
CASC3-204ENST00000474190 BAG6P46379 1132 aa13.58□□□□□ -0.24
CASC3-204ENST00000474190 KCNQ4P56696 695 aa13.58□□□□□ -0.24
CASC3-204ENST00000474190 EIF4A1P60842 406 aaKnown RBP13.58□□□□□ -0.24
CASC3-204ENST00000474190 ITPK1Q13572 414 aa13.58□□□□□ -0.24
CASC3-204ENST00000474190 R3HDM1Q15032 1099 aaKnown RBP13.58□□□□□ -0.24
CASC3-204ENST00000474190 BABAM1Q9NWV8 329 aa13.58□□□□□ -0.24
CASC3-204ENST00000474190 ZBED9Q6R2W3 1325 aa13.58□□□□□ -0.24
CASC3-204ENST00000474190 ITGB4P16144 1822 aa13.57□□□□□ -0.24
CASC3-204ENST00000474190 APBA3O96018 575 aa13.57□□□□□ -0.24
CASC3-204ENST00000474190 YY1P25490 414 aa13.57□□□□□ -0.24
CASC3-204ENST00000474190 SLFN5Q08AF3 891 aa13.57□□□□□ -0.24
CASC3-204ENST00000474190 TSR2Q969E8 191 aaKnown RBP13.57□□□□□ -0.24
CASC3-204ENST00000474190 BTAF1O14981 1849 aa13.56□□□□□ -0.24
CASC3-204ENST00000474190 LOC102724428A0A0B4J2F2 783 aa13.56□□□□□ -0.24
CASC3-204ENST00000474190 SIK1P57059 783 aa13.56□□□□□ -0.24
CASC3-204ENST00000474190 EN1Q05925 392 aaPredicted RBP13.56□□□□□ -0.24
CASC3-204ENST00000474190 EZH2Q15910 746 aaKnown RBP13.56□□□□□ -0.24
CASC3-204ENST00000474190 DUSP27Q5VZP5 1158 aa13.56□□□□□ -0.24
CASC3-204ENST00000474190 FANCIQ9NVI1 1328 aa13.56□□□□□ -0.24
CASC3-204ENST00000474190 PTCD1O75127 700 aaKnown RBP13.55□□□□□ -0.24
CASC3-204ENST00000474190 AMIGO3Q86WK7 504 aa13.55□□□□□ -0.24
CASC3-204ENST00000474190 TSPYL6Q8N831 410 aa13.55□□□□□ -0.24
CASC3-204ENST00000474190 C8orf58Q8NAV2 365 aa13.55□□□□□ -0.24
CASC3-204ENST00000474190 TSPYL4Q9UJ04 414 aa13.55□□□□□ -0.24
CASC3-204ENST00000474190 KDM3BQ7LBC6 1761 aa13.54□□□□□ -0.24
CASC3-204ENST00000474190 GIGYF1O75420 1035 aaPredicted RBP13.54□□□□□ -0.24
CASC3-204ENST00000474190 GNAI1P63096 354 aa13.54□□□□□ -0.24
CASC3-204ENST00000474190 GOLGA2Q08379 1002 aa13.54□□□□□ -0.24
CASC3-204ENST00000474190 TXNRD1Q16881 649 aa13.54□□□□□ -0.24
CASC3-204ENST00000474190 SMARCC1Q92922 1105 aaPredicted RBP13.54□□□□□ -0.24
CASC3-204ENST00000474190 RREB1Q92766 1687 aa13.53□□□□□ -0.24
CASC3-204ENST00000474190 UBR2Q8IWV8 1755 aa13.53□□□□□ -0.24
CASC3-204ENST00000474190 LINC00116Q8NCU8 138 aa13.53□□□□□ -0.24
CASC3-204ENST00000474190 CALD1Q05682 793 aaKnown RBP13.52□□□□□ -0.25
CASC3-204ENST00000474190 LRP10Q7Z4F1 713 aa13.52□□□□□ -0.25
CASC3-204ENST00000474190 DNAJC10Q8IXB1 793 aa13.52□□□□□ -0.25
CASC3-204ENST00000474190 VSIG10Q8N0Z9 540 aa13.52□□□□□ -0.25
CASC3-204ENST00000474190 ANO8Q9HCE9 1232 aaPredicted RBP13.52□□□□□ -0.25
CASC3-204ENST00000474190 LAS1LQ9Y4W2 734 aaKnown RBP13.52□□□□□ -0.25
CASC3-204ENST00000474190 USP16Q9Y5T5 823 aa13.52□□□□□ -0.25
CASC3-204ENST00000474190 NUP188Q5SRE5 1749 aa13.52□□□□□ -0.25
CASC3-204ENST00000474190 LY75O60449 1722 aa13.51□□□□□ -0.25
CASC3-204ENST00000474190 CICQ96RK0 1608 aaPredicted RBP13.51□□□□□ -0.25
CASC3-204ENST00000474190 E9PSI1 815 aa13.51□□□□□ -0.25
CASC3-204ENST00000474190 CYP19A1P11511 503 aaPredicted RBP13.51□□□□□ -0.25
CASC3-204ENST00000474190 INTS5Q6P9B9 1019 aaKnown RBP13.51□□□□□ -0.25
CASC3-204ENST00000474190 FMNL2Q96PY5 1086 aa13.51□□□□□ -0.25
CASC3-204ENST00000474190 VIRMAQ69YN4 1812 aaKnown RBP13.5□□□□□ -0.25
CASC3-204ENST00000474190 EXOSC9Q06265 439 aaKnown RBP13.5□□□□□ -0.25
CASC3-204ENST00000474190 PDIA6Q15084 440 aa13.5□□□□□ -0.25
CASC3-204ENST00000474190 ZNF827Q17R98 1081 aa13.5□□□□□ -0.25
CASC3-204ENST00000474190 SLC27A3Q5K4L6 730 aa13.5□□□□□ -0.25
CASC3-204ENST00000474190 AKT1S1Q96B36 256 aa13.5□□□□□ -0.25
CASC3-204ENST00000474190 RBM42Q9BTD8 480 aaKnown RBP13.5□□□□□ -0.25
CASC3-204ENST00000474190 CCNL1Q9UK58 526 aaPredicted RBP13.5□□□□□ -0.25
CASC3-204ENST00000474190 NBPF26B4DH59 902 aa13.49□□□□□ -0.25
CASC3-204ENST00000474190 VAMP4O75379 141 aa13.49□□□□□ -0.25
CASC3-204ENST00000474190 ATP6V1AP38606 617 aa13.49□□□□□ -0.25
CASC3-204ENST00000474190 NBPF14Q5TI25 921 aa13.49□□□□□ -0.25
CASC3-204ENST00000474190 NBPF10Q6P3W6 841 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms