RNA–Protein interactions for RNA: ENST00000473657.1

PHACTR3-207, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2

Gene PHACTR3, Length 2,408 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-207ENST00000473657 ZNF530Q6P9A1 599 aaPredicted RBP11.28□□□□□ -0.6
PHACTR3-207ENST00000473657 DCTPP1Q9H773 170 aa11.28□□□□□ -0.6
PHACTR3-207ENST00000473657 SPATA31A3Q5VYP0 1347 aa11.28□□□□□ -0.6
PHACTR3-207ENST00000473657 CPDO75976 1380 aa11.28□□□□□ -0.6
PHACTR3-207ENST00000473657 EIF4A1P60842 406 aaKnown RBP11.27□□□□□ -0.6
PHACTR3-207ENST00000473657 FLIIQ13045 1269 aa11.27□□□□□ -0.61
PHACTR3-207ENST00000473657 CEP85Q6P2H3 762 aa11.27□□□□□ -0.61
PHACTR3-207ENST00000473657 DDX17Q92841 729 aaKnown RBP11.27□□□□□ -0.61
PHACTR3-207ENST00000473657 RNMTO43148 476 aaKnown RBP11.26□□□□□ -0.61
PHACTR3-207ENST00000473657 MYT1Q01538 1121 aa11.26□□□□□ -0.61
PHACTR3-207ENST00000473657 MEIS3Q99687 375 aa11.26□□□□□ -0.61
PHACTR3-207ENST00000473657 LNPKQ9C0E8 428 aa11.26□□□□□ -0.61
PHACTR3-207ENST00000473657 HEG1Q9ULI3 1381 aa11.26□□□□□ -0.61
PHACTR3-207ENST00000473657 SCN11AQ9UI33 1791 aa11.26□□□□□ -0.61
PHACTR3-207ENST00000473657 PKD1L3Q7Z443 1732 aa11.25□□□□□ -0.61
PHACTR3-207ENST00000473657 ZC3H6P61129 1189 aaKnown RBP11.25□□□□□ -0.61
PHACTR3-207ENST00000473657 BMP2KLQ5H9B9 411 aa11.25□□□□□ -0.61
PHACTR3-207ENST00000473657 ANKRD45Q5TZF3 282 aa11.25□□□□□ -0.61
PHACTR3-207ENST00000473657 BRINP3Q76B58 766 aa11.25□□□□□ -0.61
PHACTR3-207ENST00000473657 TBC1D32Q96NH3 1257 aa11.25□□□□□ -0.61
PHACTR3-207ENST00000473657 CHMP4AQ9BY43 222 aa11.25□□□□□ -0.61
PHACTR3-207ENST00000473657 F6X3S4 739 aa11.25□□□□□ -0.61
PHACTR3-207ENST00000473657 C1orf141Q5JVX7 400 aa11.25□□□□□ -0.61
PHACTR3-207ENST00000473657 HDGFL1Q5TGJ6 251 aa11.24□□□□□ -0.61
PHACTR3-207ENST00000473657 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.24□□□□□ -0.61
PHACTR3-207ENST00000473657 TEFQ10587 303 aa11.24□□□□□ -0.61
PHACTR3-207ENST00000473657 MPRIPQ6WCQ1 1025 aa11.24□□□□□ -0.61
PHACTR3-207ENST00000473657 SOS2Q07890 1332 aaPredicted RBP11.23□□□□□ -0.61
PHACTR3-207ENST00000473657 MEGF6O75095 1541 aa11.23□□□□□ -0.61
PHACTR3-207ENST00000473657 ABCA3Q99758 1704 aa11.23□□□□□ -0.61
PHACTR3-207ENST00000473657 BTBD11A6QL63 1104 aa11.23□□□□□ -0.61
PHACTR3-207ENST00000473657 FKBP5Q13451 457 aaPredicted RBP11.23□□□□□ -0.61
PHACTR3-207ENST00000473657 MRC1P22897 1456 aa11.23□□□□□ -0.61
PHACTR3-207ENST00000473657 UPF2Q9HAU5 1272 aaKnown RBP11.23□□□□□ -0.61
PHACTR3-207ENST00000473657 KCNQ3O43525 872 aa11.22□□□□□ -0.61
PHACTR3-207ENST00000473657 PLEKHG5O94827 1062 aa11.22□□□□□ -0.61
PHACTR3-207ENST00000473657 KDM6AO15550 1401 aaPredicted RBP11.22□□□□□ -0.61
PHACTR3-207ENST00000473657 PARP4Q9UKK3 1724 aaKnown RBP11.22□□□□□ -0.61
PHACTR3-207ENST00000473657 NHSL1Q5SYE7 1610 aa11.22□□□□□ -0.61
PHACTR3-207ENST00000473657 ZNF335Q9H4Z2 1342 aaPredicted RBP11.22□□□□□ -0.61
PHACTR3-207ENST00000473657 SLC4A10Q6U841 1118 aa11.21□□□□□ -0.61
PHACTR3-207ENST00000473657 GNAI3P08754 354 aa11.21□□□□□ -0.61
PHACTR3-207ENST00000473657 CABLES1Q8TDN4 633 aa11.21□□□□□ -0.61
PHACTR3-207ENST00000473657 RAPGEF4Q8WZA2 1011 aa11.21□□□□□ -0.61
PHACTR3-207ENST00000473657 NECTIN2Q92692 538 aa11.21□□□□□ -0.61
PHACTR3-207ENST00000473657 HMMRO75330 724 aa11.2□□□□□ -0.62
PHACTR3-207ENST00000473657 GNAI2P04899 355 aa11.2□□□□□ -0.62
PHACTR3-207ENST00000473657 SLAIN2Q9P270 581 aa11.2□□□□□ -0.62
PHACTR3-207ENST00000473657 GIGYF1O75420 1035 aaPredicted RBP11.2□□□□□ -0.62
PHACTR3-207ENST00000473657 PLEKHM2Q8IWE5 1019 aa11.2□□□□□ -0.62
PHACTR3-207ENST00000473657 PHAXQ9H814 394 aaKnown RBP11.2□□□□□ -0.62
PHACTR3-207ENST00000473657 NLRP2Q9NX02 1062 aa11.2□□□□□ -0.62
PHACTR3-207ENST00000473657 PHKG2P15735 406 aa11.19□□□□□ -0.62
PHACTR3-207ENST00000473657 TATP17735 454 aaPredicted RBP11.19□□□□□ -0.62
PHACTR3-207ENST00000473657 CHPF2Q9P2E5 772 aa11.19□□□□□ -0.62
PHACTR3-207ENST00000473657 SPG7Q9UQ90 795 aa11.19□□□□□ -0.62
PHACTR3-207ENST00000473657 USP44Q9H0E7 712 aa11.19□□□□□ -0.62
PHACTR3-207ENST00000473657 DBF4Q9UBU7 674 aaPredicted RBP11.18□□□□□ -0.62
PHACTR3-207ENST00000473657 C5P01031 1676 aa11.18□□□□□ -0.62
PHACTR3-207ENST00000473657 ADCY9O60503 1353 aa11.18□□□□□ -0.62
PHACTR3-207ENST00000473657 CHRNA2Q15822 529 aa11.18□□□□□ -0.62
PHACTR3-207ENST00000473657 SLC52A2Q9HAB3 445 aa11.18□□□□□ -0.62
PHACTR3-207ENST00000473657 GSPT1P15170 499 aaKnown RBP11.17□□□□□ -0.62
PHACTR3-207ENST00000473657 EIF2S2P20042 333 aaKnown RBP11.17□□□□□ -0.62
PHACTR3-207ENST00000473657 RBM25P49756 843 aaKnown RBP11.17□□□□□ -0.62
PHACTR3-207ENST00000473657 ATP8B2P98198 1209 aa11.17□□□□□ -0.62
PHACTR3-207ENST00000473657 IFNL2Q8IZJ0 200 aa11.17□□□□□ -0.62
PHACTR3-207ENST00000473657 C22orf23Q9BZE7 217 aa11.17□□□□□ -0.62
PHACTR3-207ENST00000473657 TUBGCP6Q96RT7 1819 aa11.17□□□□□ -0.62
PHACTR3-207ENST00000473657 SLC4A3P48751 1232 aa11.17□□□□□ -0.62
PHACTR3-207ENST00000473657 BEND3Q5T5X7 828 aa11.17□□□□□ -0.62
PHACTR3-207ENST00000473657 TTC22Q5TAA0 569 aa11.17□□□□□ -0.62
PHACTR3-207ENST00000473657 DAXXQ9UER7 740 aaPredicted RBP11.17□□□□□ -0.62
PHACTR3-207ENST00000473657 COL5A2P05997 1499 aaPredicted RBP11.17□□□□□ -0.62
PHACTR3-207ENST00000473657 IBTKQ9P2D0 1353 aaPredicted RBP11.16□□□□□ -0.62
PHACTR3-207ENST00000473657 CSB-PGBD3P0DP91 1061 aa11.16□□□□□ -0.62
PHACTR3-207ENST00000473657 MFAP1P55081 439 aaKnown RBP11.16□□□□□ -0.62
PHACTR3-207ENST00000473657 DNAAF4Q8WXU2 420 aa11.16□□□□□ -0.62
PHACTR3-207ENST00000473657 SRCIN1Q9C0H9 1055 aa11.16□□□□□ -0.62
PHACTR3-207ENST00000473657 WDR17Q8IZU2 1322 aa11.16□□□□□ -0.62
PHACTR3-207ENST00000473657 GLI3P10071 1580 aa11.16□□□□□ -0.62
PHACTR3-207ENST00000473657 CYP27B1O15528 508 aa11.16□□□□□ -0.62
PHACTR3-207ENST00000473657 BECN1Q14457 450 aa11.16□□□□□ -0.62
PHACTR3-207ENST00000473657 ZNF790Q6PG37 636 aa11.16□□□□□ -0.62
PHACTR3-207ENST00000473657 DCAF5Q96JK2 942 aa11.16□□□□□ -0.62
PHACTR3-207ENST00000473657 OSBPL3Q9H4L5 887 aa11.16□□□□□ -0.62
PHACTR3-207ENST00000473657 TBC1D9Q6ZT07 1266 aa11.15□□□□□ -0.62
PHACTR3-207ENST00000473657 C16orf71Q8IYS4 520 aaPredicted RBP11.15□□□□□ -0.62
PHACTR3-207ENST00000473657 LRRFIP2Q9Y608 721 aaKnown RBP11.15□□□□□ -0.62
PHACTR3-207ENST00000473657 SALL3Q9BXA9 1300 aa11.15□□□□□ -0.62
PHACTR3-207ENST00000473657 PNMA6EA0A0J9YXQ4 647 aa11.15□□□□□ -0.63
PHACTR3-207ENST00000473657 PI4KAP2A4QPH2 592 aa11.15□□□□□ -0.63
PHACTR3-207ENST00000473657 HSP90AB1P08238 724 aaKnown RBP11.15□□□□□ -0.63
PHACTR3-207ENST00000473657 UBTFL1P0CB47 393 aaPredicted RBP11.15□□□□□ -0.63
PHACTR3-207ENST00000473657 PI4KAP1Q8N8J0 262 aa11.15□□□□□ -0.63
PHACTR3-207ENST00000473657 SSH3Q8TE77 659 aa11.15□□□□□ -0.63
PHACTR3-207ENST00000473657 SHANK3Q9BYB0 1731 aa11.15□□□□□ -0.63
PHACTR3-207ENST00000473657 CDC45O75419 566 aa11.14□□□□□ -0.63
PHACTR3-207ENST00000473657 OTUD7AQ8TE49 926 aaPredicted RBP11.14□□□□□ -0.63
PHACTR3-207ENST00000473657 DDX21Q9NR30 783 aaKnown RBP eCLIP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms