RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 CCDC146Q8IYE0 955 aa12□□□□□ -0.49
SMG5-203ENST00000473643 SLC16A10Q8TF71 515 aa12□□□□□ -0.49
SMG5-203ENST00000473643 DCAF5Q96JK2 942 aa12□□□□□ -0.49
SMG5-203ENST00000473643 TMOD3Q9NYL9 352 aa12□□□□□ -0.49
SMG5-203ENST00000473643 TFCP2L1Q9NZI6 479 aa12□□□□□ -0.49
SMG5-203ENST00000473643 PALLDQ8WX93 1383 aa12□□□□□ -0.49
SMG5-203ENST00000473643 APAF1O14727 1248 aa11.99□□□□□ -0.49
SMG5-203ENST00000473643 GAS2L2Q8NHY3 880 aa11.99□□□□□ -0.49
SMG5-203ENST00000473643 PPP1R1BQ9UD71 204 aaPredicted RBP11.99□□□□□ -0.49
SMG5-203ENST00000473643 ASAP1Q9ULH1 1129 aa11.99□□□□□ -0.49
SMG5-203ENST00000473643 PNPLA7Q6ZV29 1317 aa11.99□□□□□ -0.49
SMG5-203ENST00000473643 MAPK8IP3Q9UPT6 1336 aa11.99□□□□□ -0.49
SMG5-203ENST00000473643 DOT1LQ8TEK3 1739 aa11.99□□□□□ -0.49
SMG5-203ENST00000473643 CASZ1Q86V15 1759 aa11.98□□□□□ -0.49
SMG5-203ENST00000473643 TMPOP42166 694 aaKnown RBP11.98□□□□□ -0.49
SMG5-203ENST00000473643 NFE2L2Q16236 605 aa11.98□□□□□ -0.49
SMG5-203ENST00000473643 CCDC27Q2M243 656 aa11.98□□□□□ -0.49
SMG5-203ENST00000473643 MTHFSDQ2M296 383 aaKnown RBP11.98□□□□□ -0.49
SMG5-203ENST00000473643 ZNF530Q6P9A1 599 aaPredicted RBP11.98□□□□□ -0.49
SMG5-203ENST00000473643 ATG3Q9NT62 314 aa11.98□□□□□ -0.49
SMG5-203ENST00000473643 LOC102724428A0A0B4J2F2 783 aa11.97□□□□□ -0.49
SMG5-203ENST00000473643 HTATSF1O43719 755 aaKnown RBP11.97□□□□□ -0.49
SMG5-203ENST00000473643 SIK1P57059 783 aa11.97□□□□□ -0.49
SMG5-203ENST00000473643 C1orf141Q5JVX7 400 aa11.96□□□□□ -0.49
SMG5-203ENST00000473643 COL23A1Q86Y22 540 aaPredicted RBP11.96□□□□□ -0.49
SMG5-203ENST00000473643 LY75O60449 1722 aa11.96□□□□□ -0.49
SMG5-203ENST00000473643 RIPK4P57078 832 aa11.95□□□□□ -0.5
SMG5-203ENST00000473643 CABP4P57796 275 aa11.95□□□□□ -0.5
SMG5-203ENST00000473643 AKAP4Q5JQC9 854 aa11.95□□□□□ -0.5
SMG5-203ENST00000473643 ARXQ96QS3 562 aa11.95□□□□□ -0.5
SMG5-203ENST00000473643 KDM6AO15550 1401 aaPredicted RBP11.94□□□□□ -0.5
SMG5-203ENST00000473643 TOGARAM1Q9Y4F4 1720 aa11.94□□□□□ -0.5
SMG5-203ENST00000473643 ZNF521Q96K83 1311 aa11.94□□□□□ -0.5
SMG5-203ENST00000473643 HNRNPUQ00839 825 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMG5-203ENST00000473643 ITPK1Q13572 414 aa11.94□□□□□ -0.5
SMG5-203ENST00000473643 NFATC2IPQ8NCF5 419 aa11.94□□□□□ -0.5
SMG5-203ENST00000473643 FLAD1Q8NFF5 587 aa11.94□□□□□ -0.5
SMG5-203ENST00000473643 SYT17Q9BSW7 474 aa11.94□□□□□ -0.5
SMG5-203ENST00000473643 TRIM35Q9UPQ4 493 aa11.94□□□□□ -0.5
SMG5-203ENST00000473643 RRP7AQ9Y3A4 280 aaKnown RBP11.94□□□□□ -0.5
SMG5-203ENST00000473643 GNAT3A8MTJ3 354 aa11.93□□□□□ -0.5
SMG5-203ENST00000473643 ATP6V1AP38606 617 aa11.93□□□□□ -0.5
SMG5-203ENST00000473643 LMOD3Q0VAK6 560 aa11.93□□□□□ -0.5
SMG5-203ENST00000473643 AMIGO3Q86WK7 504 aa11.93□□□□□ -0.5
SMG5-203ENST00000473643 LINC00116Q8NCU8 138 aa11.93□□□□□ -0.5
SMG5-203ENST00000473643 SLC4A9Q96Q91 983 aa11.93□□□□□ -0.5
SMG5-203ENST00000473643 ZBED9Q6R2W3 1325 aa11.92□□□□□ -0.5
SMG5-203ENST00000473643 NEUROD2Q15784 382 aa11.92□□□□□ -0.5
SMG5-203ENST00000473643 WDR63Q8IWG1 891 aa11.92□□□□□ -0.5
SMG5-203ENST00000473643 WWC1Q8IX03 1113 aa11.92□□□□□ -0.5
SMG5-203ENST00000473643 FHDC1Q9C0D6 1143 aaPredicted RBP11.92□□□□□ -0.5
SMG5-203ENST00000473643 LGR6Q9HBX8 967 aa11.92□□□□□ -0.5
SMG5-203ENST00000473643 GOLGB1Q14789 3259 aaKnown RBP11.92□□□□□ -0.5
SMG5-203ENST00000473643 MAP3K5Q99683 1374 aa11.92□□□□□ -0.5
SMG5-203ENST00000473643 ITGB4P16144 1822 aa11.91□□□□□ -0.5
SMG5-203ENST00000473643 POLD1P28340 1107 aa11.91□□□□□ -0.5
SMG5-203ENST00000473643 IL17REQ8NFR9 667 aa11.91□□□□□ -0.5
SMG5-203ENST00000473643 AK7Q96M32 723 aa11.91□□□□□ -0.5
SMG5-203ENST00000473643 SLC52A2Q9HAB3 445 aa11.91□□□□□ -0.5
SMG5-203ENST00000473643 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.9□□□□□ -0.5
SMG5-203ENST00000473643 RNMTO43148 476 aaKnown RBP11.9□□□□□ -0.5
SMG5-203ENST00000473643 MSH5O43196 834 aa11.9□□□□□ -0.5
SMG5-203ENST00000473643 SSFA2P28290 1259 aa11.9□□□□□ -0.5
SMG5-203ENST00000473643 RC3H1Q5TC82 1133 aaKnown RBP11.9□□□□□ -0.5
SMG5-203ENST00000473643 RTF1Q92541 710 aaKnown RBP11.9□□□□□ -0.5
SMG5-203ENST00000473643 RBM42Q9BTD8 480 aaKnown RBP11.9□□□□□ -0.5
SMG5-203ENST00000473643 CEMIPQ8WUJ3 1361 aa11.9□□□□□ -0.5
SMG5-203ENST00000473643 IL16Q14005 1332 aa11.89□□□□□ -0.51
SMG5-203ENST00000473643 CALD1Q05682 793 aaKnown RBP11.89□□□□□ -0.51
SMG5-203ENST00000473643 SMIM5Q71RC9 77 aa11.89□□□□□ -0.51
SMG5-203ENST00000473643 SALL2Q9Y467 1007 aaPredicted RBP11.89□□□□□ -0.51
SMG5-203ENST00000473643 QSER1Q2KHR3 1735 aa11.89□□□□□ -0.51
SMG5-203ENST00000473643 SENP3-EIF4A1A0A087X0R7 540 aa11.88□□□□□ -0.51
SMG5-203ENST00000473643 GNPATO15228 680 aa11.88□□□□□ -0.51
SMG5-203ENST00000473643 PTCD1O75127 700 aaKnown RBP11.88□□□□□ -0.51
SMG5-203ENST00000473643 DCTN1Q14203 1278 aa11.88□□□□□ -0.51
SMG5-203ENST00000473643 MCM10Q7L590 875 aa11.88□□□□□ -0.51
SMG5-203ENST00000473643 YTHDC1Q96MU7 727 aaKnown RBP11.88□□□□□ -0.51
SMG5-203ENST00000473643 DCAF8L1A6NGE4 600 aa11.87□□□□□ -0.51
SMG5-203ENST00000473643 PHF14O94880 888 aa11.87□□□□□ -0.51
SMG5-203ENST00000473643 ZNF853P0CG23 659 aa11.87□□□□□ -0.51
SMG5-203ENST00000473643 GOLGA2Q08379 1002 aa11.87□□□□□ -0.51
SMG5-203ENST00000473643 BABAM1Q9NWV8 329 aa11.87□□□□□ -0.51
SMG5-203ENST00000473643 C5P01031 1676 aa11.87□□□□□ -0.51
SMG5-203ENST00000473643 CNTNAP4Q9C0A0 1308 aa11.86□□□□□ -0.51
SMG5-203ENST00000473643 C4BP0C0L5 1744 aa11.86□□□□□ -0.51
SMG5-203ENST00000473643 RPS6KA4O75676 772 aa11.86□□□□□ -0.51
SMG5-203ENST00000473643 ADRA2BP18089 450 aa11.86□□□□□ -0.51
SMG5-203ENST00000473643 SLFN5Q08AF3 891 aa11.86□□□□□ -0.51
SMG5-203ENST00000473643 TRAPPC3LQ5T215 181 aa11.86□□□□□ -0.51
SMG5-203ENST00000473643 MSL1Q68DK7 614 aa11.86□□□□□ -0.51
SMG5-203ENST00000473643 TRMT2AQ8IZ69 625 aaKnown RBP11.86□□□□□ -0.51
SMG5-203ENST00000473643 CFAP44Q96MT7 982 aa11.86□□□□□ -0.51
SMG5-203ENST00000473643 THUMPD2Q9BTF0 503 aaKnown RBP11.86□□□□□ -0.51
SMG5-203ENST00000473643 IFT57Q9NWB7 429 aa11.86□□□□□ -0.51
SMG5-203ENST00000473643 RTCBQ9Y3I0 505 aaKnown RBP11.86□□□□□ -0.51
SMG5-203ENST00000473643 ADAMTS7Q9UKP4 1686 aa11.85□□□□□ -0.51
SMG5-203ENST00000473643 E9PSI1 815 aa11.85□□□□□ -0.51
SMG5-203ENST00000473643 CHL1O00533 1208 aa11.85□□□□□ -0.51
SMG5-203ENST00000473643 SLC39A6Q13433 755 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms