RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 CYP27B1O15528 508 aa7.88□□□□□ -1.15
CLK1-210ENST00000473565 LARP1Q6PKG0 1096 aaKnown RBP7.88□□□□□ -1.15
CLK1-210ENST00000473565 PHAXQ9H814 394 aaKnown RBP7.88□□□□□ -1.15
CLK1-210ENST00000473565 ROBO1Q9Y6N7 1651 aa7.88□□□□□ -1.15
CLK1-210ENST00000473565 KDM6AO15550 1401 aaPredicted RBP7.88□□□□□ -1.15
CLK1-210ENST00000473565 FKBP5Q13451 457 aaPredicted RBP7.88□□□□□ -1.15
CLK1-210ENST00000473565 SIRT2Q8IXJ6 389 aa7.88□□□□□ -1.15
CLK1-210ENST00000473565 KDM3BQ7LBC6 1761 aa7.87□□□□□ -1.15
CLK1-210ENST00000473565 PHKG2P15735 406 aa7.87□□□□□ -1.15
CLK1-210ENST00000473565 FLIIQ13045 1269 aa7.87□□□□□ -1.15
CLK1-210ENST00000473565 AAMPQ13685 434 aa7.87□□□□□ -1.15
CLK1-210ENST00000473565 MEIS3Q99687 375 aa7.87□□□□□ -1.15
CLK1-210ENST00000473565 COL5A2P05997 1499 aaPredicted RBP7.87□□□□□ -1.15
CLK1-210ENST00000473565 PIP4K2BP78356 416 aa7.87□□□□□ -1.15
CLK1-210ENST00000473565 CCDC30Q5VVM6 783 aa7.87□□□□□ -1.15
CLK1-210ENST00000473565 NFATC2IPQ8NCF5 419 aa7.87□□□□□ -1.15
CLK1-210ENST00000473565 CHPF2Q9P2E5 772 aa7.87□□□□□ -1.15
CLK1-210ENST00000473565 WDR17Q8IZU2 1322 aa7.87□□□□□ -1.15
CLK1-210ENST00000473565 INTS3Q68E01 1043 aaKnown RBP7.86□□□□□ -1.15
CLK1-210ENST00000473565 LTBP4Q8N2S1 1624 aa7.86□□□□□ -1.15
CLK1-210ENST00000473565 SPG7Q9UQ90 795 aa7.86□□□□□ -1.15
CLK1-210ENST00000473565 PTPRCP08575 1304 aa7.86□□□□□ -1.15
CLK1-210ENST00000473565 MSH5O43196 834 aa7.86□□□□□ -1.15
CLK1-210ENST00000473565 EVA1CP58658 441 aa7.86□□□□□ -1.15
CLK1-210ENST00000473565 HDAC1Q13547 482 aaPredicted RBP7.86□□□□□ -1.15
CLK1-210ENST00000473565 C8orf34Q49A92 452 aa7.86□□□□□ -1.15
CLK1-210ENST00000473565 PROSER3Q2NL68 480 aa7.86□□□□□ -1.15
CLK1-210ENST00000473565 BTG4Q9NY30 223 aa7.86□□□□□ -1.15
CLK1-210ENST00000473565 IFNL2Q8IZJ0 200 aa7.85□□□□□ -1.15
CLK1-210ENST00000473565 LNPKQ9C0E8 428 aa7.85□□□□□ -1.15
CLK1-210ENST00000473565 SIPA1L3O60292 1781 aaPredicted RBP7.85□□□□□ -1.15
CLK1-210ENST00000473565 PIP4K2AP48426 406 aaPredicted RBP7.85□□□□□ -1.15
CLK1-210ENST00000473565 DDX54Q8TDD1 881 aaKnown RBP7.85□□□□□ -1.15
CLK1-210ENST00000473565 BABAM1Q9NWV8 329 aa7.85□□□□□ -1.15
CLK1-210ENST00000473565 SCN11AQ9UI33 1791 aa7.85□□□□□ -1.15
CLK1-210ENST00000473565 ADAMTS2O95450 1211 aa7.84□□□□□ -1.15
CLK1-210ENST00000473565 SMC5Q8IY18 1101 aa7.84□□□□□ -1.15
CLK1-210ENST00000473565 SLC52A2Q9HAB3 445 aa7.84□□□□□ -1.15
CLK1-210ENST00000473565 APBB1O00213 710 aa7.84□□□□□ -1.15
CLK1-210ENST00000473565 GIGYF1O75420 1035 aaPredicted RBP7.84□□□□□ -1.15
CLK1-210ENST00000473565 FAM161AQ3B820 660 aa7.84□□□□□ -1.15
CLK1-210ENST00000473565 OVOS2A0A0G2JMS6 1433 aa7.84□□□□□ -1.16
CLK1-210ENST00000473565 ABCC6O95255 1503 aa7.83□□□□□ -1.16
CLK1-210ENST00000473565 KAT6BQ8WYB5 2073 aa7.83□□□□□ -1.16
CLK1-210ENST00000473565 SEC24BO95487 1268 aa7.83□□□□□ -1.16
CLK1-210ENST00000473565 ANKRD45Q5TZF3 282 aa7.83□□□□□ -1.16
CLK1-210ENST00000473565 ZNF790Q6PG37 636 aa7.83□□□□□ -1.16
CLK1-210ENST00000473565 ZCRB1Q8TBF4 217 aaKnown RBP7.83□□□□□ -1.16
CLK1-210ENST00000473565 ZNF496Q96IT1 587 aaPredicted RBP7.83□□□□□ -1.16
CLK1-210ENST00000473565 ATP10DQ9P241 1426 aa7.83□□□□□ -1.16
CLK1-210ENST00000473565 PKD1L3Q7Z443 1732 aa7.83□□□□□ -1.16
CLK1-210ENST00000473565 ADAMTS7Q9UKP4 1686 aa7.83□□□□□ -1.16
CLK1-210ENST00000473565 NUTM2BA6NNL0 878 aaPredicted RBP7.83□□□□□ -1.16
CLK1-210ENST00000473565 NUTM2EB1AL46 878 aaPredicted RBP7.83□□□□□ -1.16
CLK1-210ENST00000473565 NUTM2AQ8IVF1 878 aaPredicted RBP7.83□□□□□ -1.16
CLK1-210ENST00000473565 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.83□□□□□ -1.165e-10■■□□□ 13.8
CLK1-210ENST00000473565 PI4KAP2A4QPH2 592 aa7.82□□□□□ -1.16
CLK1-210ENST00000473565 IL2RBP14784 551 aa7.82□□□□□ -1.16
CLK1-210ENST00000473565 CABP4P57796 275 aa7.82□□□□□ -1.16
CLK1-210ENST00000473565 CEP85Q6P2H3 762 aa7.82□□□□□ -1.16
CLK1-210ENST00000473565 PI4KAP1Q8N8J0 262 aa7.82□□□□□ -1.16
CLK1-210ENST00000473565 DCAF5Q96JK2 942 aa7.82□□□□□ -1.16
CLK1-210ENST00000473565 CARD10Q9BWT7 1032 aa7.82□□□□□ -1.16
CLK1-210ENST00000473565 C5P01031 1676 aa7.82□□□□□ -1.16
CLK1-210ENST00000473565 CACNA1FO60840 1977 aa7.82□□□□□ -1.16
CLK1-210ENST00000473565 CCT4P50991 539 aaKnown RBP7.82□□□□□ -1.16
CLK1-210ENST00000473565 AIMP1Q12904 312 aaKnown RBP7.82□□□□□ -1.16
CLK1-210ENST00000473565 MYL6BP14649 208 aa7.82□□□□□ -1.16
CLK1-210ENST00000473565 NUCB1Q02818 461 aa7.82□□□□□ -1.16
CLK1-210ENST00000473565 CHD1LQ86WJ1 897 aa7.82□□□□□ -1.16
CLK1-210ENST00000473565 HEG1Q9ULI3 1381 aa7.81□□□□□ -1.16
CLK1-210ENST00000473565 SMARCA5O60264 1052 aaPredicted RBP7.81□□□□□ -1.16
CLK1-210ENST00000473565 ANKRD44Q8N8A2 993 aa7.81□□□□□ -1.16
CLK1-210ENST00000473565 CHMP4BQ9H444 224 aaKnown RBP7.81□□□□□ -1.16
CLK1-210ENST00000473565 USP16Q9Y5T5 823 aa7.81□□□□□ -1.16
CLK1-210ENST00000473565 PARP4Q9UKK3 1724 aaKnown RBP7.81□□□□□ -1.16
CLK1-210ENST00000473565 ANP32AP39687 249 aaKnown RBP7.81□□□□□ -1.16
CLK1-210ENST00000473565 COL16A1Q07092 1604 aaPredicted RBP7.81□□□□□ -1.16
CLK1-210ENST00000473565 PCDH11XQ9BZA7 1347 aa7.81□□□□□ -1.16
CLK1-210ENST00000473565 PCDH11YQ9BZA8 1340 aa7.81□□□□□ -1.16
CLK1-210ENST00000473565 PHLPP1O60346 1717 aa7.81□□□□□ -1.16
CLK1-210ENST00000473565 SHANK3Q9BYB0 1731 aa7.81□□□□□ -1.16
CLK1-210ENST00000473565 ADCY9O60503 1353 aa7.8□□□□□ -1.16
CLK1-210ENST00000473565 AHDC1Q5TGY3 1603 aaPredicted RBP7.8□□□□□ -1.16
CLK1-210ENST00000473565 HOXB7P09629 217 aa7.8□□□□□ -1.16
CLK1-210ENST00000473565 C16orf71Q8IYS4 520 aaPredicted RBP7.8□□□□□ -1.16
CLK1-210ENST00000473565 TTC5Q8N0Z6 440 aa7.8□□□□□ -1.16
CLK1-210ENST00000473565 DBF4Q9UBU7 674 aaPredicted RBP7.8□□□□□ -1.16
CLK1-210ENST00000473565 LRRFIP2Q9Y608 721 aaKnown RBP7.8□□□□□ -1.16
CLK1-210ENST00000473565 SOS1Q07889 1333 aaPredicted RBP7.8□□□□□ -1.16
CLK1-210ENST00000473565 OTUD7AQ8TE49 926 aaPredicted RBP7.8□□□□□ -1.16
CLK1-210ENST00000473565 USP44Q9H0E7 712 aa7.8□□□□□ -1.16
CLK1-210ENST00000473565 PTCD1O75127 700 aaKnown RBP7.8□□□□□ -1.16
CLK1-210ENST00000473565 PDIA6Q15084 440 aa7.8□□□□□ -1.16
CLK1-210ENST00000473565 DNAAF4Q8WXU2 420 aa7.8□□□□□ -1.16
CLK1-210ENST00000473565 MAP3K2Q9Y2U5 619 aa7.8□□□□□ -1.16
CLK1-210ENST00000473565 PNMA6EA0A0J9YXQ4 647 aa7.79□□□□□ -1.16
CLK1-210ENST00000473565 UBAP1LF5GYI3 381 aa7.79□□□□□ -1.16
CLK1-210ENST00000473565 GNAI2P04899 355 aa7.79□□□□□ -1.16
CLK1-210ENST00000473565 NBPF7P0C2Y1 421 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms