RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 FBLN1P23142 703 aa9.68□□□□□ -0.86
CKS1B-205ENST00000473344 IER5LQ5T953 404 aa9.68□□□□□ -0.86
CKS1B-205ENST00000473344 RTL1A6NKG5 1358 aa9.67□□□□□ -0.86
CKS1B-205ENST00000473344 NSD2O96028 1365 aa9.67□□□□□ -0.86
CKS1B-205ENST00000473344 TATP17735 454 aaPredicted RBP9.67□□□□□ -0.86
CKS1B-205ENST00000473344 RRS1Q15050 365 aaKnown RBP9.67□□□□□ -0.86
CKS1B-205ENST00000473344 NBPF6Q5VWK0 638 aa9.67□□□□□ -0.86
CKS1B-205ENST00000473344 USHBP1Q8N6Y0 703 aa9.67□□□□□ -0.86
CKS1B-205ENST00000473344 NBPF4Q96M43 638 aa9.67□□□□□ -0.86
CKS1B-205ENST00000473344 DOT1LQ8TEK3 1739 aa9.67□□□□□ -0.86
CKS1B-205ENST00000473344 MEGF6O75095 1541 aa9.66□□□□□ -0.86
CKS1B-205ENST00000473344 PCDH11XQ9BZA7 1347 aa9.66□□□□□ -0.86
CKS1B-205ENST00000473344 PCDH11YQ9BZA8 1340 aa9.66□□□□□ -0.86
CKS1B-205ENST00000473344 QSER1Q2KHR3 1735 aa9.66□□□□□ -0.86
CKS1B-205ENST00000473344 TMF1P82094 1093 aa9.66□□□□□ -0.86
CKS1B-205ENST00000473344 MSL1Q68DK7 614 aa9.66□□□□□ -0.86
CKS1B-205ENST00000473344 POTEGQ6S5H5 508 aa9.66□□□□□ -0.86
CKS1B-205ENST00000473344 COL23A1Q86Y22 540 aaPredicted RBP9.66□□□□□ -0.86
CKS1B-205ENST00000473344 FLAD1Q8NFF5 587 aa9.66□□□□□ -0.86
CKS1B-205ENST00000473344 FAM212AQ96EL1 285 aa9.66□□□□□ -0.86
CKS1B-205ENST00000473344 TESK2Q96S53 571 aa9.66□□□□□ -0.86
CKS1B-205ENST00000473344 GGNBP2Q9H3C7 697 aa9.66□□□□□ -0.86
CKS1B-205ENST00000473344 CHD4Q14839 1912 aa9.66□□□□□ -0.86
CKS1B-205ENST00000473344 SEC24BO95487 1268 aa9.65□□□□□ -0.86
CKS1B-205ENST00000473344 POTEJP0CG39 1038 aa9.65□□□□□ -0.86
CKS1B-205ENST00000473344 MPRIPQ6WCQ1 1025 aa9.65□□□□□ -0.86
CKS1B-205ENST00000473344 PCDHB13Q9Y5F0 798 aa9.65□□□□□ -0.86
CKS1B-205ENST00000473344 TTLL13PA6NNM8 815 aa9.64□□□□□ -0.87
CKS1B-205ENST00000473344 FYB1O15117 783 aa9.64□□□□□ -0.87
CKS1B-205ENST00000473344 YBX3P16989 372 aaKnown RBP eCLIP9.64□□□□□ -0.87
CKS1B-205ENST00000473344 NUBP1P53384 320 aa9.64□□□□□ -0.87
CKS1B-205ENST00000473344 AK7Q96M32 723 aa9.64□□□□□ -0.87
CKS1B-205ENST00000473344 CD2APQ9Y5K6 639 aa9.64□□□□□ -0.87
CKS1B-205ENST00000473344 LY75O60449 1722 aa9.64□□□□□ -0.87
CKS1B-205ENST00000473344 PALLDQ8WX93 1383 aa9.63□□□□□ -0.87
CKS1B-205ENST00000473344 CDCA8Q53HL2 280 aa9.63□□□□□ -0.87
CKS1B-205ENST00000473344 HSP90AB2PQ58FF8 381 aa9.63□□□□□ -0.87
CKS1B-205ENST00000473344 SMARCC1Q92922 1105 aaPredicted RBP9.63□□□□□ -0.87
CKS1B-205ENST00000473344 INSRP06213 1382 aa9.63□□□□□ -0.87
CKS1B-205ENST00000473344 FLT4P35916 1363 aa9.63□□□□□ -0.87
CKS1B-205ENST00000473344 KAT6BQ8WYB5 2073 aa9.62□□□□□ -0.87
CKS1B-205ENST00000473344 PPM1GO15355 546 aaPredicted RBP9.62□□□□□ -0.87
CKS1B-205ENST00000473344 PHF14O94880 888 aa9.62□□□□□ -0.87
CKS1B-205ENST00000473344 GPBP1L1Q9HC44 474 aaPredicted RBP9.62□□□□□ -0.87
CKS1B-205ENST00000473344 FBXO3Q9UK99 471 aa9.62□□□□□ -0.87
CKS1B-205ENST00000473344 COL24A1Q17RW2 1714 aa9.62□□□□□ -0.87
CKS1B-205ENST00000473344 KIF24Q5T7B8 1368 aa9.62□□□□□ -0.87
CKS1B-205ENST00000473344 ZEB1P37275 1124 aaPredicted RBP9.61□□□□□ -0.87
CKS1B-205ENST00000473344 TRPC6Q9Y210 931 aa9.61□□□□□ -0.87
CKS1B-205ENST00000473344 SHANK3Q9BYB0 1731 aa9.61□□□□□ -0.87
CKS1B-205ENST00000473344 TUBGCP6Q96RT7 1819 aa9.61□□□□□ -0.87
CKS1B-205ENST00000473344 NSD3Q9BZ95 1437 aa9.6□□□□□ -0.87
CKS1B-205ENST00000473344 ATP10DQ9P241 1426 aa9.6□□□□□ -0.87
CKS1B-205ENST00000473344 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.6□□□□□ -0.87
CKS1B-205ENST00000473344 CYP27B1O15528 508 aa9.6□□□□□ -0.87
CKS1B-205ENST00000473344 FKBP8Q14318 412 aa9.6□□□□□ -0.87
CKS1B-205ENST00000473344 ZNF526Q8TF50 670 aaPredicted RBP9.6□□□□□ -0.87
CKS1B-205ENST00000473344 SPG7Q9UQ90 795 aa9.6□□□□□ -0.87
CKS1B-205ENST00000473344 C5P01031 1676 aa9.6□□□□□ -0.87
CKS1B-205ENST00000473344 RGPD2P0DJD1 1756 aa9.6□□□□□ -0.87
CKS1B-205ENST00000473344 POTEFA5A3E0 1075 aa9.59□□□□□ -0.87
CKS1B-205ENST00000473344 WWC3Q9ULE0 1092 aa9.59□□□□□ -0.87
CKS1B-205ENST00000473344 IGSF1Q8N6C5 1336 aa9.58□□□□□ -0.88
CKS1B-205ENST00000473344 SSFA2P28290 1259 aa9.58□□□□□ -0.88
CKS1B-205ENST00000473344 PIGBQ92521 554 aa9.58□□□□□ -0.88
CKS1B-205ENST00000473344 TMOD3Q9NYL9 352 aa9.58□□□□□ -0.88
CKS1B-205ENST00000473344 TRIM35Q9UPQ4 493 aa9.58□□□□□ -0.88
CKS1B-205ENST00000473344 EMILIN1Q9Y6C2 1016 aa9.58□□□□□ -0.88
CKS1B-205ENST00000473344 C4BP0C0L5 1744 aa9.57□□□□□ -0.88
CKS1B-205ENST00000473344 LOC102724428A0A0B4J2F2 783 aa9.57□□□□□ -0.88
CKS1B-205ENST00000473344 SIK1P57059 783 aa9.57□□□□□ -0.88
CKS1B-205ENST00000473344 IFFO2Q5TF58 517 aa9.57□□□□□ -0.88
CKS1B-205ENST00000473344 GNPATO15228 680 aa9.56□□□□□ -0.88
CKS1B-205ENST00000473344 ATP6V1AP38606 617 aa9.56□□□□□ -0.88
CKS1B-205ENST00000473344 NKX1-1Q15270 411 aaPredicted RBP9.56□□□□□ -0.88
CKS1B-205ENST00000473344 SMIM5Q71RC9 77 aa9.56□□□□□ -0.88
CKS1B-205ENST00000473344 AMIGO3Q86WK7 504 aa9.56□□□□□ -0.88
CKS1B-205ENST00000473344 IFNL2Q8IZJ0 200 aa9.56□□□□□ -0.88
CKS1B-205ENST00000473344 HSPA6P17066 643 aa9.55□□□□□ -0.88
CKS1B-205ENST00000473344 LINC00116Q8NCU8 138 aa9.55□□□□□ -0.88
CKS1B-205ENST00000473344 FAM163AQ96GL9 167 aaPredicted RBP9.55□□□□□ -0.88
CKS1B-205ENST00000473344 CARD14Q9BXL6 1004 aa9.55□□□□□ -0.88
CKS1B-205ENST00000473344 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.55□□□□□ -0.88
CKS1B-205ENST00000473344 ASAP1Q9ULH1 1129 aa9.55□□□□□ -0.88
CKS1B-205ENST00000473344 WASHC2AQ641Q2 1341 aa9.55□□□□□ -0.88
CKS1B-205ENST00000473344 KIF20BQ96Q89 1820 aa9.54□□□□□ -0.88
CKS1B-205ENST00000473344 ADCY9O60503 1353 aa9.54□□□□□ -0.88
CKS1B-205ENST00000473344 PHKG2P15735 406 aa9.54□□□□□ -0.88
CKS1B-205ENST00000473344 IFNL1Q8IU54 200 aa9.54□□□□□ -0.88
CKS1B-205ENST00000473344 EYA1Q99502 592 aa9.54□□□□□ -0.88
CKS1B-205ENST00000473344 COLQQ9Y215 455 aaPredicted RBP9.54□□□□□ -0.88
CKS1B-205ENST00000473344 RTCBQ9Y3I0 505 aaKnown RBP9.54□□□□□ -0.88
CKS1B-205ENST00000473344 MMP10P09238 476 aa9.53□□□□□ -0.88
CKS1B-205ENST00000473344 ITPK1Q13572 414 aa9.53□□□□□ -0.88
CKS1B-205ENST00000473344 TRAPPC3LQ5T215 181 aa9.53□□□□□ -0.88
CKS1B-205ENST00000473344 POLR3GLQ9BT43 218 aa9.53□□□□□ -0.88
CKS1B-205ENST00000473344 TMEM106CQ9BVX2 250 aa9.53□□□□□ -0.88
CKS1B-205ENST00000473344 ATG3Q9NT62 314 aa9.53□□□□□ -0.88
CKS1B-205ENST00000473344 PKD1L3Q7Z443 1732 aa9.53□□□□□ -0.88
CKS1B-205ENST00000473344 TOGARAM1Q9Y4F4 1720 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms