RNA–Protein interactions for RNA: ENST00000473322.1

CCDC66-215, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-215ENST00000473322 GTF2E1P29083 439 aaPredicted RBP8.63□□□□□ -1.03
CCDC66-215ENST00000473322 TRIM26Q12899 539 aaPredicted RBP8.63□□□□□ -1.03
CCDC66-215ENST00000473322 TBC1D9Q6ZT07 1266 aa8.63□□□□□ -1.03
CCDC66-215ENST00000473322 PPARGC1BQ86YN6 1023 aaKnown RBP8.63□□□□□ -1.03
CCDC66-215ENST00000473322 SLC4A9Q96Q91 983 aa8.63□□□□□ -1.03
CCDC66-215ENST00000473322 USP17L3A6NCW0 530 aa8.62□□□□□ -1.03
CCDC66-215ENST00000473322 USP17L4A6NCW7 530 aa8.62□□□□□ -1.03
CCDC66-215ENST00000473322 STAU1O95793 577 aaKnown RBP8.62□□□□□ -1.03
CCDC66-215ENST00000473322 GTF2IP78347 998 aa8.62□□□□□ -1.03
CCDC66-215ENST00000473322 TLR1Q15399 786 aa8.62□□□□□ -1.03
CCDC66-215ENST00000473322 GNASQ5JWF2 1037 aa8.62□□□□□ -1.03
CCDC66-215ENST00000473322 USP17L2Q6R6M4 530 aa8.62□□□□□ -1.03
CCDC66-215ENST00000473322 SV2AQ7L0J3 742 aa8.62□□□□□ -1.03
CCDC66-215ENST00000473322 USP17L1Q7RTZ2 530 aa8.62□□□□□ -1.03
CCDC66-215ENST00000473322 TRIM50Q86XT4 487 aa8.62□□□□□ -1.03
CCDC66-215ENST00000473322 TIMMDC1Q9NPL8 285 aa8.62□□□□□ -1.03
CCDC66-215ENST00000473322 TMEM229AB2RXF0 380 aa8.61□□□□□ -1.03
CCDC66-215ENST00000473322 TMEM214Q6NUQ4 689 aaKnown RBP8.61□□□□□ -1.03
CCDC66-215ENST00000473322 TRIM22Q8IYM9 498 aa8.61□□□□□ -1.03
CCDC66-215ENST00000473322 DEPDC4Q8N2C3 294 aa8.61□□□□□ -1.03
CCDC66-215ENST00000473322 VWA5B2Q8N398 1253 aa8.61□□□□□ -1.03
CCDC66-215ENST00000473322 GPR161Q8N6U8 529 aaKnown RBP8.61□□□□□ -1.03
CCDC66-215ENST00000473322 RHBDD1Q8TEB9 315 aa8.61□□□□□ -1.03
CCDC66-215ENST00000473322 ARID3CA6NKF2 412 aa8.6□□□□□ -1.03
CCDC66-215ENST00000473322 H7C1W4 665 aa8.6□□□□□ -1.03
CCDC66-215ENST00000473322 SMTNP53814 917 aa8.6□□□□□ -1.03
CCDC66-215ENST00000473322 CCDC82Q8N4S0 544 aa8.6□□□□□ -1.03
CCDC66-215ENST00000473322 CALR3Q96L12 384 aaKnown RBP8.6□□□□□ -1.03
CCDC66-215ENST00000473322 A0A1B0GTH6 734 aa8.59□□□□□ -1.03
CCDC66-215ENST00000473322 CDC14CA4D256 554 aa8.59□□□□□ -1.03
CCDC66-215ENST00000473322 BACH1O14867 736 aa8.59□□□□□ -1.03
CCDC66-215ENST00000473322 F11P03951 625 aa8.59□□□□□ -1.03
CCDC66-215ENST00000473322 ATP1A2P50993 1020 aa8.59□□□□□ -1.03
CCDC66-215ENST00000473322 MTFR1Q15390 333 aa8.59□□□□□ -1.03
CCDC66-215ENST00000473322 C4orf17Q53FE4 359 aa8.59□□□□□ -1.03
CCDC66-215ENST00000473322 ARID3AQ99856 593 aa8.59□□□□□ -1.03
CCDC66-215ENST00000473322 CUEDC1Q9NWM3 386 aaPredicted RBP8.59□□□□□ -1.03
CCDC66-215ENST00000473322 SERPINA10Q9UK55 444 aa8.59□□□□□ -1.03
CCDC66-215ENST00000473322 CDK2AP1O14519 115 aa8.58□□□□□ -1.04
CCDC66-215ENST00000473322 PDIA4P13667 645 aaKnown RBP8.58□□□□□ -1.04
CCDC66-215ENST00000473322 LORP23490 312 aaPredicted RBP8.58□□□□□ -1.04
CCDC66-215ENST00000473322 TFIP11Q9UBB9 837 aaKnown RBP8.58□□□□□ -1.04
CCDC66-215ENST00000473322 STK17AQ9UEE5 414 aa8.58□□□□□ -1.04
CCDC66-215ENST00000473322 PALM3A6NDB9 673 aaPredicted RBP8.57□□□□□ -1.04
CCDC66-215ENST00000473322 A6NJY4 79 aa8.57□□□□□ -1.04
CCDC66-215ENST00000473322 PSME1Q06323 249 aa8.57□□□□□ -1.04
CCDC66-215ENST00000473322 DBN1Q16643 649 aa8.57□□□□□ -1.04
CCDC66-215ENST00000473322 RIPOR1Q6ZS17 1223 aa8.57□□□□□ -1.04
CCDC66-215ENST00000473322 LARGE2Q8N3Y3 721 aa8.57□□□□□ -1.04
CCDC66-215ENST00000473322 ZSCAN1Q8NBB4 408 aa8.57□□□□□ -1.04
CCDC66-215ENST00000473322 ZNF837Q96EG3 531 aaPredicted RBP8.57□□□□□ -1.04
CCDC66-215ENST00000473322 GAS2L1Q99501 681 aaPredicted RBP8.57□□□□□ -1.04
CCDC66-215ENST00000473322 COL25A1Q9BXS0 654 aaPredicted RBP8.57□□□□□ -1.04
CCDC66-215ENST00000473322 PPP1R12CQ9BZL4 782 aa8.57□□□□□ -1.04
CCDC66-215ENST00000473322 IQSEC3Q9UPP2 1182 aaPredicted RBP8.57□□□□□ -1.04
CCDC66-215ENST00000473322 MAFBQ9Y5Q3 323 aaPredicted RBP8.57□□□□□ -1.04
CCDC66-215ENST00000473322 ZBTB7BO15156 539 aaPredicted RBP8.56□□□□□ -1.04
CCDC66-215ENST00000473322 RANGAP1P46060 587 aaPredicted RBP8.56□□□□□ -1.04
CCDC66-215ENST00000473322 KRT76Q01546 638 aa8.56□□□□□ -1.04
CCDC66-215ENST00000473322 FOXR1Q6PIV2 292 aa8.56□□□□□ -1.04
CCDC66-215ENST00000473322 NIFKQ9BYG3 293 aaKnown RBP8.56□□□□□ -1.04
CCDC66-215ENST00000473322 ZNF358Q9NW07 568 aa8.56□□□□□ -1.04
CCDC66-215ENST00000473322 MKRN1Q9UHC7 482 aaKnown RBP8.56□□□□□ -1.04
CCDC66-215ENST00000473322 SERTAD1Q9UHV2 236 aa8.56□□□□□ -1.04
CCDC66-215ENST00000473322 PHKA2P46019 1235 aa8.55□□□□□ -1.04
CCDC66-215ENST00000473322 CLDN10P78369 228 aa8.55□□□□□ -1.04
CCDC66-215ENST00000473322 LBRQ14739 615 aaKnown RBP8.55□□□□□ -1.04
CCDC66-215ENST00000473322 ZNF295-AS1Q8N0V1 137 aa8.55□□□□□ -1.04
CCDC66-215ENST00000473322 DNAAF2Q9NVR5 837 aaKnown RBP8.55□□□□□ -1.04
CCDC66-215ENST00000473322 RNFT1Q5M7Z0 435 aa8.54□□□□□ -1.04
CCDC66-215ENST00000473322 SIX5Q8N196 739 aa8.54□□□□□ -1.04
CCDC66-215ENST00000473322 OGFOD1Q8N543 542 aa8.54□□□□□ -1.04
CCDC66-215ENST00000473322 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.54□□□□□ -1.04
CCDC66-215ENST00000473322 C1orf216Q8TAB5 229 aa8.54□□□□□ -1.04
CCDC66-215ENST00000473322 CNTNAP3BQ96NU0 1288 aa8.54□□□□□ -1.04
CCDC66-215ENST00000473322 CNTNAP3Q9BZ76 1288 aa8.54□□□□□ -1.04
CCDC66-215ENST00000473322 SCHIP1Q9P0W5 487 aaPredicted RBP8.54□□□□□ -1.04
CCDC66-215ENST00000473322 ZBTB7CA1YPR0 619 aa8.53□□□□□ -1.04
CCDC66-215ENST00000473322 FAM181BA6NEQ2 426 aa8.53□□□□□ -1.04
CCDC66-215ENST00000473322 M0R2N6 131 aa8.53□□□□□ -1.04
CCDC66-215ENST00000473322 MSX1P28360 303 aa8.53□□□□□ -1.04
CCDC66-215ENST00000473322 EPHA4P54764 986 aa8.53□□□□□ -1.04
CCDC66-215ENST00000473322 FOXK2Q01167 660 aa8.53□□□□□ -1.04
CCDC66-215ENST00000473322 CCDC102BQ68D86 513 aa8.53□□□□□ -1.04
CCDC66-215ENST00000473322 TPCN2Q8NHX9 752 aa8.53□□□□□ -1.04
CCDC66-215ENST00000473322 TRAIPQ9BWF2 469 aa8.53□□□□□ -1.04
CCDC66-215ENST00000473322 NUCKS1Q9H1E3 243 aaKnown RBP8.53□□□□□ -1.04
CCDC66-215ENST00000473322 ZNF777Q9ULD5 760 aaPredicted RBP8.53□□□□□ -1.04
CCDC66-215ENST00000473322 KIAA1024Q9UPX6 916 aa8.53□□□□□ -1.04
CCDC66-215ENST00000473322 SLURP2P0DP57 97 aa8.52□□□□□ -1.05
CCDC66-215ENST00000473322 CSB-PGBD3P0DP91 1061 aa8.52□□□□□ -1.05
CCDC66-215ENST00000473322 PGBD3Q8N328 593 aa8.52□□□□□ -1.05
CCDC66-215ENST00000473322 CRISPLD1Q9H336 500 aa8.52□□□□□ -1.05
CCDC66-215ENST00000473322 DKK1O94907 266 aa8.51□□□□□ -1.05
CCDC66-215ENST00000473322 PLA2G4AP47712 749 aa8.51□□□□□ -1.05
CCDC66-215ENST00000473322 GAS6Q14393 721 aa8.51□□□□□ -1.05
CCDC66-215ENST00000473322 KANK4Q5T7N3 995 aaPredicted RBP8.51□□□□□ -1.05
CCDC66-215ENST00000473322 GTPBP3Q969Y2 492 aaKnown RBP8.51□□□□□ -1.05
CCDC66-215ENST00000473322 CCDC97Q96F63 343 aaPredicted RBP8.51□□□□□ -1.05
CCDC66-215ENST00000473322 TRERF1Q96PN7 1200 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms