RNA–Protein interactions for RNA: ENST00000473308.1

C1orf56-203, Transcript of chromosome 1 open reading frame 56, humanhuman

TSL 3

Gene C1orf56, Length 323 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf56-203ENST00000473308 PNPLA7Q6ZV29 1317 aa12.25□□□□□ -0.45
C1orf56-203ENST00000473308 C5P01031 1676 aa12.25□□□□□ -0.45
C1orf56-203ENST00000473308 QSER1Q2KHR3 1735 aa12.25□□□□□ -0.45
C1orf56-203ENST00000473308 TUBGCP6Q96RT7 1819 aa12.25□□□□□ -0.45
C1orf56-203ENST00000473308 HMGB2P26583 209 aaKnown RBP12.24□□□□□ -0.45
C1orf56-203ENST00000473308 ATP6V1AP38606 617 aa12.24□□□□□ -0.45
C1orf56-203ENST00000473308 ITPK1Q13572 414 aa12.24□□□□□ -0.45
C1orf56-203ENST00000473308 LINC00116Q8NCU8 138 aa12.24□□□□□ -0.45
C1orf56-203ENST00000473308 SLC4A9Q96Q91 983 aa12.24□□□□□ -0.45
C1orf56-203ENST00000473308 MTFR1LQ9H019 292 aa12.24□□□□□ -0.45
C1orf56-203ENST00000473308 SLC52A2Q9HAB3 445 aa12.24□□□□□ -0.45
C1orf56-203ENST00000473308 ATF5Q9Y2D1 282 aaPredicted RBP12.24□□□□□ -0.45
C1orf56-203ENST00000473308 VIRMAQ69YN4 1812 aaKnown RBP12.23□□□□□ -0.45
C1orf56-203ENST00000473308 ADAMTS7Q9UKP4 1686 aa12.23□□□□□ -0.45
C1orf56-203ENST00000473308 PTGER2P43116 358 aa12.23□□□□□ -0.45
C1orf56-203ENST00000473308 MRC1P22897 1456 aa12.22□□□□□ -0.45
C1orf56-203ENST00000473308 MAP3K5Q99683 1374 aa12.22□□□□□ -0.45
C1orf56-203ENST00000473308 MYBBP1AQ9BQG0 1328 aaKnown RBP12.22□□□□□ -0.45
C1orf56-203ENST00000473308 GNAT3A8MTJ3 354 aa12.22□□□□□ -0.45
C1orf56-203ENST00000473308 IL17REQ8NFR9 667 aa12.22□□□□□ -0.45
C1orf56-203ENST00000473308 SGIP1Q9BQI5 828 aa12.22□□□□□ -0.45
C1orf56-203ENST00000473308 RBM42Q9BTD8 480 aaKnown RBP12.22□□□□□ -0.45
C1orf56-203ENST00000473308 C4BP0C0L5 1744 aa12.22□□□□□ -0.45
C1orf56-203ENST00000473308 ZNF316A6NFI3 1004 aaPredicted RBP12.21□□□□□ -0.45
C1orf56-203ENST00000473308 AMIGO3Q86WK7 504 aa12.21□□□□□ -0.45
C1orf56-203ENST00000473308 COL23A1Q86Y22 540 aaPredicted RBP12.21□□□□□ -0.45
C1orf56-203ENST00000473308 SLC16A10Q8TF71 515 aa12.21□□□□□ -0.45
C1orf56-203ENST00000473308 AK7Q96M32 723 aa12.21□□□□□ -0.45
C1orf56-203ENST00000473308 ZNF831Q5JPB2 1677 aa12.2□□□□□ -0.46
C1orf56-203ENST00000473308 PTCD1O75127 700 aaKnown RBP12.2□□□□□ -0.46
C1orf56-203ENST00000473308 SLC39A6Q13433 755 aa12.2□□□□□ -0.46
C1orf56-203ENST00000473308 PLEKHF1Q96S99 279 aa12.2□□□□□ -0.46
C1orf56-203ENST00000473308 PRKRIP1Q9H875 184 aaPredicted RBP12.2□□□□□ -0.46
C1orf56-203ENST00000473308 CEMIPQ8WUJ3 1361 aa12.19□□□□□ -0.46
C1orf56-203ENST00000473308 UBR3Q6ZT12 1888 aa12.19□□□□□ -0.46
C1orf56-203ENST00000473308 SMIM5Q71RC9 77 aa12.19□□□□□ -0.46
C1orf56-203ENST00000473308 FLAD1Q8NFF5 587 aa12.19□□□□□ -0.46
C1orf56-203ENST00000473308 PPP1R1BQ9UD71 204 aaPredicted RBP12.19□□□□□ -0.46
C1orf56-203ENST00000473308 MSH5O43196 834 aa12.18□□□□□ -0.46
C1orf56-203ENST00000473308 RC3H1Q5TC82 1133 aaKnown RBP12.18□□□□□ -0.46
C1orf56-203ENST00000473308 COL24A1Q17RW2 1714 aa12.17□□□□□ -0.46
C1orf56-203ENST00000473308 CNTNAP4Q9C0A0 1308 aa12.17□□□□□ -0.46
C1orf56-203ENST00000473308 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.17□□□□□ -0.46
C1orf56-203ENST00000473308 GNPATO15228 680 aa12.17□□□□□ -0.46
C1orf56-203ENST00000473308 PHF14O94880 888 aa12.17□□□□□ -0.46
C1orf56-203ENST00000473308 SSFA2P28290 1259 aa12.17□□□□□ -0.46
C1orf56-203ENST00000473308 TEFQ10587 303 aa12.17□□□□□ -0.46
C1orf56-203ENST00000473308 MYH14Q7Z406 1995 aaKnown RBP12.17□□□□□ -0.46
C1orf56-203ENST00000473308 COL5A3P25940 1745 aaPredicted RBP12.17□□□□□ -0.46
C1orf56-203ENST00000473308 KCPQ6ZWJ8 1503 aa12.16□□□□□ -0.46
C1orf56-203ENST00000473308 SIPA1L3O60292 1781 aaPredicted RBP12.16□□□□□ -0.46
C1orf56-203ENST00000473308 HTATSF1O43719 755 aaKnown RBP12.16□□□□□ -0.46
C1orf56-203ENST00000473308 MCM10Q7L590 875 aa12.16□□□□□ -0.46
C1orf56-203ENST00000473308 CICQ96RK0 1608 aaPredicted RBP12.15□□□□□ -0.46
C1orf56-203ENST00000473308 TJP1Q07157 1748 aa12.15□□□□□ -0.46
C1orf56-203ENST00000473308 NEFMP07197 916 aa12.15□□□□□ -0.46
C1orf56-203ENST00000473308 POLD1P28340 1107 aa12.15□□□□□ -0.46
C1orf56-203ENST00000473308 CRKLP46109 303 aaKnown RBP12.15□□□□□ -0.46
C1orf56-203ENST00000473308 DCTN1Q14203 1278 aa12.15□□□□□ -0.46
C1orf56-203ENST00000473308 MSL1Q68DK7 614 aa12.15□□□□□ -0.46
C1orf56-203ENST00000473308 ZNF790Q6PG37 636 aa12.15□□□□□ -0.46
C1orf56-203ENST00000473308 DNAJC10Q8IXB1 793 aa12.15□□□□□ -0.46
C1orf56-203ENST00000473308 RTF1Q92541 710 aaKnown RBP12.15□□□□□ -0.46
C1orf56-203ENST00000473308 ARXQ96QS3 562 aa12.15□□□□□ -0.46
C1orf56-203ENST00000473308 PNNQ9H307 717 aaKnown RBP12.15□□□□□ -0.46
C1orf56-203ENST00000473308 RPS6KA4O75676 772 aa12.14□□□□□ -0.47
C1orf56-203ENST00000473308 NFE2L2Q16236 605 aa12.14□□□□□ -0.47
C1orf56-203ENST00000473308 TRAPPC3LQ5T215 181 aa12.14□□□□□ -0.47
C1orf56-203ENST00000473308 TTC5Q8N0Z6 440 aa12.14□□□□□ -0.47
C1orf56-203ENST00000473308 VSIG10Q8N0Z9 540 aa12.14□□□□□ -0.47
C1orf56-203ENST00000473308 FHDC1Q9C0D6 1143 aaPredicted RBP12.14□□□□□ -0.47
C1orf56-203ENST00000473308 RTCBQ9Y3I0 505 aaKnown RBP12.14□□□□□ -0.47
C1orf56-203ENST00000473308 UBR2Q8IWV8 1755 aa12.14□□□□□ -0.47
C1orf56-203ENST00000473308 DLG5Q8TDM6 1919 aa12.13□□□□□ -0.47
C1orf56-203ENST00000473308 BTBD11A6QL63 1104 aa12.13□□□□□ -0.47
C1orf56-203ENST00000473308 KCNQ3O43525 872 aa12.13□□□□□ -0.47
C1orf56-203ENST00000473308 CYP19A1P11511 503 aaPredicted RBP12.13□□□□□ -0.47
C1orf56-203ENST00000473308 ADRA2BP18089 450 aa12.13□□□□□ -0.47
C1orf56-203ENST00000473308 INTS5Q6P9B9 1019 aaKnown RBP12.13□□□□□ -0.47
C1orf56-203ENST00000473308 ARHGEF1Q92888 912 aaKnown RBP12.13□□□□□ -0.47
C1orf56-203ENST00000473308 ZNF496Q96IT1 587 aaPredicted RBP12.13□□□□□ -0.47
C1orf56-203ENST00000473308 SYT17Q9BSW7 474 aa12.13□□□□□ -0.47
C1orf56-203ENST00000473308 MAPK8IP3Q9UPT6 1336 aa12.12□□□□□ -0.47
C1orf56-203ENST00000473308 UTRNP46939 3433 aa12.12□□□□□ -0.47
C1orf56-203ENST00000473308 HEG1Q9ULI3 1381 aa12.11□□□□□ -0.47
C1orf56-203ENST00000473308 WDR43Q15061 677 aaKnown RBP eCLIP12.11□□□□□ -0.47
C1orf56-203ENST00000473308 FMNL2Q96PY5 1086 aa12.11□□□□□ -0.47
C1orf56-203ENST00000473308 CCDC87Q9NVE4 849 aa12.11□□□□□ -0.47
C1orf56-203ENST00000473308 ADAMTS8Q9UP79 889 aa12.11□□□□□ -0.47
C1orf56-203ENST00000473308 TAF7Q15545 349 aaPredicted RBP12.1□□□□□ -0.47
C1orf56-203ENST00000473308 CCDC146Q8IYE0 955 aa12.1□□□□□ -0.47
C1orf56-203ENST00000473308 THUMPD2Q9BTF0 503 aaKnown RBP12.1□□□□□ -0.47
C1orf56-203ENST00000473308 ZBTB1Q9Y2K1 713 aa12.1□□□□□ -0.47
C1orf56-203ENST00000473308 GOLGB1Q14789 3259 aaKnown RBP12.1□□□□□ -0.47
C1orf56-203ENST00000473308 GYS1P13807 737 aa12.09□□□□□ -0.47
C1orf56-203ENST00000473308 RFC4P35249 363 aa12.09□□□□□ -0.47
C1orf56-203ENST00000473308 TMPOP42166 694 aaKnown RBP12.09□□□□□ -0.47
C1orf56-203ENST00000473308 RIPK4P57078 832 aa12.09□□□□□ -0.47
C1orf56-203ENST00000473308 RUNDC1Q96C34 613 aa12.09□□□□□ -0.47
C1orf56-203ENST00000473308 TEX13AQ9BXU3 409 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms