RNA–Protein interactions for RNA: ENST00000473252.5

C9orf85-204, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 5

Gene C9orf85, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-204ENST00000473252 COL24A1Q17RW2 1714 aa17.03■□□□□ 0.32
C9orf85-204ENST00000473252 HMOX1P09601 288 aa17.02■□□□□ 0.32
C9orf85-204ENST00000473252 CNGB1Q14028 1251 aaPredicted RBP17.02■□□□□ 0.32
C9orf85-204ENST00000473252 TFCP2L1Q9NZI6 479 aa17.02■□□□□ 0.32
C9orf85-204ENST00000473252 KDM6AO15550 1401 aaPredicted RBP17.02■□□□□ 0.31
C9orf85-204ENST00000473252 LOC102724428A0A0B4J2F2 783 aa17.01■□□□□ 0.31
C9orf85-204ENST00000473252 SIK1P57059 783 aa17.01■□□□□ 0.31
C9orf85-204ENST00000473252 CABP4P57796 275 aa17.01■□□□□ 0.31
C9orf85-204ENST00000473252 FLAD1Q8NFF5 587 aa17.01■□□□□ 0.31
C9orf85-204ENST00000473252 PDGFDQ9GZP0 370 aaPredicted RBP17.01■□□□□ 0.31
C9orf85-204ENST00000473252 PPP1R1BQ9UD71 204 aaPredicted RBP17.01■□□□□ 0.31
C9orf85-204ENST00000473252 C4BP0C0L5 1744 aa17.01■□□□□ 0.31
C9orf85-204ENST00000473252 SRCAPQ6ZRS2 3230 aa17■□□□□ 0.31
C9orf85-204ENST00000473252 U2SURPO15042 1029 aaKnown RBP17■□□□□ 0.31
C9orf85-204ENST00000473252 KCNQ4P56696 695 aa17■□□□□ 0.31
C9orf85-204ENST00000473252 ATG3Q9NT62 314 aa17■□□□□ 0.31
C9orf85-204ENST00000473252 ADAMTS7Q9UKP4 1686 aa17■□□□□ 0.31
C9orf85-204ENST00000473252 PNPLA7Q6ZV29 1317 aa16.99■□□□□ 0.31
C9orf85-204ENST00000473252 ZBTB7AO95365 584 aa16.99■□□□□ 0.31
C9orf85-204ENST00000473252 MYCNP04198 464 aaPredicted RBP16.99■□□□□ 0.31
C9orf85-204ENST00000473252 ASAP1Q9ULH1 1129 aa16.99■□□□□ 0.31
C9orf85-204ENST00000473252 PTGER2P43116 358 aa16.98■□□□□ 0.31
C9orf85-204ENST00000473252 MTHFSDQ2M296 383 aaKnown RBP16.98■□□□□ 0.31
C9orf85-204ENST00000473252 GAS2L2Q8NHY3 880 aa16.98■□□□□ 0.31
C9orf85-204ENST00000473252 UBR3Q6ZT12 1888 aa16.97■□□□□ 0.31
C9orf85-204ENST00000473252 SGIP1Q9BQI5 828 aa16.97■□□□□ 0.31
C9orf85-204ENST00000473252 ATF5Q9Y2D1 282 aaPredicted RBP16.97■□□□□ 0.31
C9orf85-204ENST00000473252 ATP6V1AP38606 617 aa16.96■□□□□ 0.31
C9orf85-204ENST00000473252 RALBP1Q15311 655 aa16.96■□□□□ 0.31
C9orf85-204ENST00000473252 NFATC2IPQ8NCF5 419 aa16.96■□□□□ 0.31
C9orf85-204ENST00000473252 MRC1P22897 1456 aa16.96■□□□□ 0.31
C9orf85-204ENST00000473252 CICQ96RK0 1608 aaPredicted RBP16.96■□□□□ 0.3
C9orf85-204ENST00000473252 RNMTO43148 476 aaKnown RBP16.95■□□□□ 0.3
C9orf85-204ENST00000473252 FCHSD2O94868 740 aa16.95■□□□□ 0.3
C9orf85-204ENST00000473252 AK7Q96M32 723 aa16.95■□□□□ 0.3
C9orf85-204ENST00000473252 SLC52A2Q9HAB3 445 aa16.95■□□□□ 0.3
C9orf85-204ENST00000473252 COL5A3P25940 1745 aaPredicted RBP16.95■□□□□ 0.3
C9orf85-204ENST00000473252 COL23A1Q86Y22 540 aaPredicted RBP16.94■□□□□ 0.3
C9orf85-204ENST00000473252 RSPH6AQ9H0K4 717 aa16.94■□□□□ 0.3
C9orf85-204ENST00000473252 SSFA2P28290 1259 aa16.93■□□□□ 0.3
C9orf85-204ENST00000473252 POLD1P28340 1107 aa16.93■□□□□ 0.3
C9orf85-204ENST00000473252 RC3H1Q5TC82 1133 aaKnown RBP16.93■□□□□ 0.3
C9orf85-204ENST00000473252 GNAT3A8MTJ3 354 aa16.92■□□□□ 0.3
C9orf85-204ENST00000473252 U2AF1L5P0DN76 240 aaPredicted RBP16.92■□□□□ 0.3
C9orf85-204ENST00000473252 U2AF1Q01081 240 aaKnown RBP eCLIP16.92■□□□□ 0.3
C9orf85-204ENST00000473252 C1QBPQ07021 282 aaKnown RBP16.92■□□□□ 0.3
C9orf85-204ENST00000473252 DDX10Q13206 875 aaKnown RBP16.92■□□□□ 0.3
C9orf85-204ENST00000473252 ITPK1Q13572 414 aa16.92■□□□□ 0.3
C9orf85-204ENST00000473252 LINC00116Q8NCU8 138 aa16.92■□□□□ 0.3
C9orf85-204ENST00000473252 ARXQ96QS3 562 aa16.92■□□□□ 0.3
C9orf85-204ENST00000473252 LGR6Q9HBX8 967 aa16.92■□□□□ 0.3
C9orf85-204ENST00000473252 MAP3K5Q99683 1374 aa16.91■□□□□ 0.3
C9orf85-204ENST00000473252 PRKAR2BP31323 418 aa16.91■□□□□ 0.3
C9orf85-204ENST00000473252 RBM42Q9BTD8 480 aaKnown RBP16.91■□□□□ 0.3
C9orf85-204ENST00000473252 SIPA1L3O60292 1781 aaPredicted RBP16.9■□□□□ 0.3
C9orf85-204ENST00000473252 PNNQ9H307 717 aaKnown RBP16.9■□□□□ 0.3
C9orf85-204ENST00000473252 CNTNAP4Q9C0A0 1308 aa16.9■□□□□ 0.3
C9orf85-204ENST00000473252 NEFMP07197 916 aa16.89■□□□□ 0.29
C9orf85-204ENST00000473252 SLC4A9Q96Q91 983 aa16.89■□□□□ 0.29
C9orf85-204ENST00000473252 UBR2Q8IWV8 1755 aa16.88■□□□□ 0.29
C9orf85-204ENST00000473252 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.88■□□□□ 0.29
C9orf85-204ENST00000473252 HTATSF1O43719 755 aaKnown RBP16.88■□□□□ 0.29
C9orf85-204ENST00000473252 VSIG10Q8N0Z9 540 aa16.88■□□□□ 0.29
C9orf85-204ENST00000473252 SYT17Q9BSW7 474 aa16.88■□□□□ 0.29
C9orf85-204ENST00000473252 RTCBQ9Y3I0 505 aaKnown RBP16.88■□□□□ 0.29
C9orf85-204ENST00000473252 MYH14Q7Z406 1995 aaKnown RBP16.88■□□□□ 0.29
C9orf85-204ENST00000473252 TJP1Q07157 1748 aa16.87■□□□□ 0.29
C9orf85-204ENST00000473252 GNPATO15228 680 aa16.87■□□□□ 0.29
C9orf85-204ENST00000473252 TEFQ10587 303 aa16.87■□□□□ 0.29
C9orf85-204ENST00000473252 IL17REQ8NFR9 667 aa16.87■□□□□ 0.29
C9orf85-204ENST00000473252 PHACTR3Q96KR7 559 aa16.87■□□□□ 0.29
C9orf85-204ENST00000473252 FHDC1Q9C0D6 1143 aaPredicted RBP16.87■□□□□ 0.29
C9orf85-204ENST00000473252 CEMIPQ8WUJ3 1361 aa16.87■□□□□ 0.29
C9orf85-204ENST00000473252 PTCD1O75127 700 aaKnown RBP16.86■□□□□ 0.29
C9orf85-204ENST00000473252 RPS6KA4O75676 772 aa16.86■□□□□ 0.29
C9orf85-204ENST00000473252 MYBBP1AQ9BQG0 1328 aaKnown RBP16.86■□□□□ 0.29
C9orf85-204ENST00000473252 TRAPPC3LQ5T215 181 aa16.85■□□□□ 0.29
C9orf85-204ENST00000473252 PHF14O94880 888 aa16.84■□□□□ 0.29
C9orf85-204ENST00000473252 TTC5Q8N0Z6 440 aa16.84■□□□□ 0.29
C9orf85-204ENST00000473252 RTF1Q92541 710 aaKnown RBP16.84■□□□□ 0.29
C9orf85-204ENST00000473252 KCPQ6ZWJ8 1503 aa16.84■□□□□ 0.29
C9orf85-204ENST00000473252 DLG5Q8TDM6 1919 aa16.84■□□□□ 0.29
C9orf85-204ENST00000473252 AMIGO3Q86WK7 504 aa16.83■□□□□ 0.28
C9orf85-204ENST00000473252 CRKLP46109 303 aaKnown RBP16.82■□□□□ 0.28
C9orf85-204ENST00000473252 SLC39A6Q13433 755 aa16.82■□□□□ 0.28
C9orf85-204ENST00000473252 ZNF790Q6PG37 636 aa16.82■□□□□ 0.28
C9orf85-204ENST00000473252 PLEKHF1Q96S99 279 aa16.82■□□□□ 0.28
C9orf85-204ENST00000473252 TEX13AQ9BXU3 409 aaPredicted RBP16.82■□□□□ 0.28
C9orf85-204ENST00000473252 NLGN1Q8N2Q7 840 aa16.81■□□□□ 0.28
C9orf85-204ENST00000473252 C4AP0C0L4 1744 aa16.81■□□□□ 0.28
C9orf85-204ENST00000473252 RFC4P35249 363 aa16.8■□□□□ 0.28
C9orf85-204ENST00000473252 ARHGEF1Q92888 912 aaKnown RBP16.8■□□□□ 0.28
C9orf85-204ENST00000473252 BTBD11A6QL63 1104 aa16.79■□□□□ 0.28
C9orf85-204ENST00000473252 CYP19A1P11511 503 aaPredicted RBP16.79■□□□□ 0.28
C9orf85-204ENST00000473252 MSL1Q68DK7 614 aa16.79■□□□□ 0.28
C9orf85-204ENST00000473252 INTS5Q6P9B9 1019 aaKnown RBP16.79■□□□□ 0.28
C9orf85-204ENST00000473252 DNAJC10Q8IXB1 793 aa16.79■□□□□ 0.28
C9orf85-204ENST00000473252 PRKRIP1Q9H875 184 aaPredicted RBP16.79■□□□□ 0.28
C9orf85-204ENST00000473252 CCDC87Q9NVE4 849 aa16.79■□□□□ 0.28
C9orf85-204ENST00000473252 CD2APQ9Y5K6 639 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms