RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 POLD1P28340 1107 aa17.54■□□□□ 0.4
TPM3-216ENST00000473036 PLEKHF1Q96S99 279 aa17.54■□□□□ 0.4
TPM3-216ENST00000473036 LRRC4BQ9NT99 713 aa17.54■□□□□ 0.4
TPM3-216ENST00000473036 FCHSD2O94868 740 aa17.53■□□□□ 0.4
TPM3-216ENST00000473036 KCNQ4P56696 695 aa17.53■□□□□ 0.4
TPM3-216ENST00000473036 AKAP4Q5JQC9 854 aa17.53■□□□□ 0.4
TPM3-216ENST00000473036 AKT1S1Q96B36 256 aa17.53■□□□□ 0.4
TPM3-216ENST00000473036 COL24A1Q17RW2 1714 aa17.52■□□□□ 0.4
TPM3-216ENST00000473036 GOLGB1Q14789 3259 aaKnown RBP17.52■□□□□ 0.4
TPM3-216ENST00000473036 SENP3-EIF4A1A0A087X0R7 540 aa17.52■□□□□ 0.4
TPM3-216ENST00000473036 GPR162Q16538 588 aa17.52■□□□□ 0.4
TPM3-216ENST00000473036 DCAF5Q96JK2 942 aa17.52■□□□□ 0.4
TPM3-216ENST00000473036 ZNF827Q17R98 1081 aa17.51■□□□□ 0.39
TPM3-216ENST00000473036 DLG5Q8TDM6 1919 aa17.51■□□□□ 0.39
TPM3-216ENST00000473036 ERVV-2B6SEH9 535 aa17.5■□□□□ 0.39
TPM3-216ENST00000473036 C1orf141Q5JVX7 400 aa17.5■□□□□ 0.39
TPM3-216ENST00000473036 ASAP1Q9ULH1 1129 aa17.5■□□□□ 0.39
TPM3-216ENST00000473036 RNMTO43148 476 aaKnown RBP17.49■□□□□ 0.39
TPM3-216ENST00000473036 HSP90AB1P08238 724 aaKnown RBP17.49■□□□□ 0.39
TPM3-216ENST00000473036 IL17REQ8NFR9 667 aa17.49■□□□□ 0.39
TPM3-216ENST00000473036 ATG3Q9NT62 314 aa17.49■□□□□ 0.39
TPM3-216ENST00000473036 MRC1P22897 1456 aa17.49■□□□□ 0.39
TPM3-216ENST00000473036 SIPA1L3O60292 1781 aaPredicted RBP17.48■□□□□ 0.39
TPM3-216ENST00000473036 GIGYF1O75420 1035 aaPredicted RBP17.48■□□□□ 0.39
TPM3-216ENST00000473036 NFATC2IPQ8NCF5 419 aa17.48■□□□□ 0.39
TPM3-216ENST00000473036 TMOD3Q9NYL9 352 aa17.48■□□□□ 0.39
TPM3-216ENST00000473036 TAF1LQ8IZX4 1826 aa17.47■□□□□ 0.39
TPM3-216ENST00000473036 GAS2L2Q8NHY3 880 aa17.47■□□□□ 0.39
TPM3-216ENST00000473036 SLC4A9Q96Q91 983 aa17.47■□□□□ 0.39
TPM3-216ENST00000473036 ADAMTS8Q9UP79 889 aa17.47■□□□□ 0.39
TPM3-216ENST00000473036 PALLDQ8WX93 1383 aa17.47■□□□□ 0.39
TPM3-216ENST00000473036 GRIN3BO60391 1043 aa17.46■□□□□ 0.39
TPM3-216ENST00000473036 TFCP2L1Q9NZI6 479 aa17.46■□□□□ 0.39
TPM3-216ENST00000473036 PNPLA7Q6ZV29 1317 aa17.46■□□□□ 0.38
TPM3-216ENST00000473036 TUBGCP6Q96RT7 1819 aa17.45■□□□□ 0.38
TPM3-216ENST00000473036 GNAT3A8MTJ3 354 aa17.45■□□□□ 0.38
TPM3-216ENST00000473036 ANP32CO43423 234 aa17.45■□□□□ 0.38
TPM3-216ENST00000473036 CABP4P57796 275 aa17.45■□□□□ 0.38
TPM3-216ENST00000473036 CEP350Q5VT06 3117 aa17.44■□□□□ 0.38
TPM3-216ENST00000473036 CEMIPQ8WUJ3 1361 aa17.44■□□□□ 0.38
TPM3-216ENST00000473036 DCTN1Q14203 1278 aa17.44■□□□□ 0.38
TPM3-216ENST00000473036 CCDC146Q8IYE0 955 aa17.44■□□□□ 0.38
TPM3-216ENST00000473036 SLC52A2Q9HAB3 445 aa17.44■□□□□ 0.38
TPM3-216ENST00000473036 C5P01031 1676 aa17.43■□□□□ 0.38
TPM3-216ENST00000473036 CCNL1Q9UK58 526 aaPredicted RBP17.43■□□□□ 0.38
TPM3-216ENST00000473036 ITPK1Q13572 414 aa17.42■□□□□ 0.38
TPM3-216ENST00000473036 MCM10Q7L590 875 aa17.42■□□□□ 0.38
TPM3-216ENST00000473036 LOC102724428A0A0B4J2F2 783 aa17.41■□□□□ 0.38
TPM3-216ENST00000473036 SIK1P57059 783 aa17.41■□□□□ 0.38
TPM3-216ENST00000473036 SLC39A6Q13433 755 aa17.41■□□□□ 0.38
TPM3-216ENST00000473036 NFE2L2Q16236 605 aa17.41■□□□□ 0.38
TPM3-216ENST00000473036 SMARCC1Q92922 1105 aaPredicted RBP17.41■□□□□ 0.38
TPM3-216ENST00000473036 KCPQ6ZWJ8 1503 aa17.41■□□□□ 0.38
TPM3-216ENST00000473036 UBR2Q8IWV8 1755 aa17.4■□□□□ 0.38
TPM3-216ENST00000473036 AMIGO3Q86WK7 504 aa17.4■□□□□ 0.38
TPM3-216ENST00000473036 PNISRQ8TF01 805 aaKnown RBP17.4■□□□□ 0.38
TPM3-216ENST00000473036 ZNF831Q5JPB2 1677 aa17.39■□□□□ 0.37
TPM3-216ENST00000473036 TJP1Q07157 1748 aa17.39■□□□□ 0.37
TPM3-216ENST00000473036 WDR43Q15061 677 aaKnown RBP eCLIP17.39■□□□□ 0.37
TPM3-216ENST00000473036 LINC00116Q8NCU8 138 aa17.39■□□□□ 0.37
TPM3-216ENST00000473036 FLAD1Q8NFF5 587 aa17.39■□□□□ 0.37
TPM3-216ENST00000473036 MYH14Q7Z406 1995 aaKnown RBP17.39■□□□□ 0.37
TPM3-216ENST00000473036 C4BP0C0L5 1744 aa17.38■□□□□ 0.37
TPM3-216ENST00000473036 COL5A3P25940 1745 aaPredicted RBP17.38■□□□□ 0.37
TPM3-216ENST00000473036 KCNQ3O43525 872 aa17.38■□□□□ 0.37
TPM3-216ENST00000473036 TMPOP42166 694 aaKnown RBP17.38■□□□□ 0.37
TPM3-216ENST00000473036 IFFO2Q5TF58 517 aa17.38■□□□□ 0.37
TPM3-216ENST00000473036 KLHL34Q8N239 644 aa17.38■□□□□ 0.37
TPM3-216ENST00000473036 THUMPD2Q9BTF0 503 aaKnown RBP17.38■□□□□ 0.37
TPM3-216ENST00000473036 RRP7AQ9Y3A4 280 aaKnown RBP17.38■□□□□ 0.37
TPM3-216ENST00000473036 PTCD1O75127 700 aaKnown RBP17.37■□□□□ 0.37
TPM3-216ENST00000473036 SMIM5Q71RC9 77 aa17.37■□□□□ 0.37
TPM3-216ENST00000473036 RUNDC1Q96C34 613 aa17.37■□□□□ 0.37
TPM3-216ENST00000473036 CD2APQ9Y5K6 639 aa17.37■□□□□ 0.37
TPM3-216ENST00000473036 UBR3Q6ZT12 1888 aa17.36■□□□□ 0.37
TPM3-216ENST00000473036 HTATSF1O43719 755 aaKnown RBP17.36■□□□□ 0.37
TPM3-216ENST00000473036 ATP6V1AP38606 617 aa17.36■□□□□ 0.37
TPM3-216ENST00000473036 PELP1Q8IZL8 1130 aaKnown RBP17.36■□□□□ 0.37
TPM3-216ENST00000473036 NLGN2Q8NFZ4 835 aa17.36■□□□□ 0.37
TPM3-216ENST00000473036 RBM42Q9BTD8 480 aaKnown RBP17.36■□□□□ 0.37
TPM3-216ENST00000473036 MRS2Q9HD23 443 aa17.36■□□□□ 0.37
TPM3-216ENST00000473036 MAPK8IP3Q9UPT6 1336 aa17.36■□□□□ 0.37
TPM3-216ENST00000473036 CICQ96RK0 1608 aaPredicted RBP17.36■□□□□ 0.37
TPM3-216ENST00000473036 PNNQ9H307 717 aaKnown RBP17.35■□□□□ 0.37
TPM3-216ENST00000473036 TRIM35Q9UPQ4 493 aa17.35■□□□□ 0.37
TPM3-216ENST00000473036 RIPK4P57078 832 aa17.34■□□□□ 0.37
TPM3-216ENST00000473036 TEFQ10587 303 aa17.34■□□□□ 0.37
TPM3-216ENST00000473036 MIS18AQ9NYP9 233 aa17.34■□□□□ 0.37
TPM3-216ENST00000473036 YBX3P16989 372 aaKnown RBP eCLIP17.33■□□□□ 0.36
TPM3-216ENST00000473036 COL23A1Q86Y22 540 aaPredicted RBP17.33■□□□□ 0.36
TPM3-216ENST00000473036 RTF1Q92541 710 aaKnown RBP17.33■□□□□ 0.36
TPM3-216ENST00000473036 KDM3BQ7LBC6 1761 aa17.33■□□□□ 0.36
TPM3-216ENST00000473036 NEUROD2Q15784 382 aa17.32■□□□□ 0.36
TPM3-216ENST00000473036 ZNF790Q6PG37 636 aa17.32■□□□□ 0.36
TPM3-216ENST00000473036 ZNF496Q96IT1 587 aaPredicted RBP17.32■□□□□ 0.36
TPM3-216ENST00000473036 BTBD11A6QL63 1104 aa17.31■□□□□ 0.36
TPM3-216ENST00000473036 APAF1O14727 1248 aa17.31■□□□□ 0.36
TPM3-216ENST00000473036 MSH5O43196 834 aa17.31■□□□□ 0.36
TPM3-216ENST00000473036 NEFMP07197 916 aa17.31■□□□□ 0.36
TPM3-216ENST00000473036 DNAJC10Q8IXB1 793 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms