RNA–Protein interactions for RNA: ENST00000473003.5

RAPGEF4-208, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 4

Gene RAPGEF4, Length 593 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-208ENST00000473003 LINC00116Q8NCU8 138 aa11.66□□□□□ -0.54
RAPGEF4-208ENST00000473003 KTN1Q86UP2 1357 aaKnown RBP11.66□□□□□ -0.54
RAPGEF4-208ENST00000473003 POTECB2RU33 542 aa11.65□□□□□ -0.54
RAPGEF4-208ENST00000473003 RASSF7Q02833 373 aa11.65□□□□□ -0.54
RAPGEF4-208ENST00000473003 NLGN1Q8N2Q7 840 aa11.65□□□□□ -0.54
RAPGEF4-208ENST00000473003 MON2Q7Z3U7 1717 aa11.65□□□□□ -0.54
RAPGEF4-208ENST00000473003 MAP2P11137 1827 aaKnown RBP11.65□□□□□ -0.55
RAPGEF4-208ENST00000473003 LMNB1P20700 586 aa11.64□□□□□ -0.55
RAPGEF4-208ENST00000473003 TMF1P82094 1093 aa11.64□□□□□ -0.55
RAPGEF4-208ENST00000473003 LTV1Q96GA3 475 aaPredicted RBP11.64□□□□□ -0.55
RAPGEF4-208ENST00000473003 CFAP44Q96MT7 982 aa11.64□□□□□ -0.55
RAPGEF4-208ENST00000473003 MPRIPQ6WCQ1 1025 aa11.63□□□□□ -0.55
RAPGEF4-208ENST00000473003 IP6K1Q92551 441 aa11.63□□□□□ -0.55
RAPGEF4-208ENST00000473003 CGNL1Q0VF96 1302 aa11.62□□□□□ -0.55
RAPGEF4-208ENST00000473003 PASKQ96RG2 1323 aa11.62□□□□□ -0.55
RAPGEF4-208ENST00000473003 LOC102724428A0A0B4J2F2 783 aa11.62□□□□□ -0.55
RAPGEF4-208ENST00000473003 SIK1P57059 783 aa11.62□□□□□ -0.55
RAPGEF4-208ENST00000473003 MAP2K1Q02750 393 aaPredicted RBP11.62□□□□□ -0.55
RAPGEF4-208ENST00000473003 PRPF38BQ5VTL8 546 aaKnown RBP11.62□□□□□ -0.55
RAPGEF4-208ENST00000473003 NME9Q86XW9 330 aa11.62□□□□□ -0.55
RAPGEF4-208ENST00000473003 PARP3Q9Y6F1 533 aa11.62□□□□□ -0.55
RAPGEF4-208ENST00000473003 EVC2Q86UK5 1308 aa11.61□□□□□ -0.55
RAPGEF4-208ENST00000473003 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.61□□□□□ -0.55
RAPGEF4-208ENST00000473003 PCDH11XQ9BZA7 1347 aa11.6□□□□□ -0.55
RAPGEF4-208ENST00000473003 PCDH11YQ9BZA8 1340 aa11.6□□□□□ -0.55
RAPGEF4-208ENST00000473003 THSD7BQ9C0I4 1608 aa11.6□□□□□ -0.55
RAPGEF4-208ENST00000473003 TMEM88BA6NKF7 163 aa11.6□□□□□ -0.55
RAPGEF4-208ENST00000473003 POTEIP0CG38 1075 aa11.6□□□□□ -0.55
RAPGEF4-208ENST00000473003 POTEJP0CG39 1038 aa11.6□□□□□ -0.55
RAPGEF4-208ENST00000473003 ITPK1Q13572 414 aa11.6□□□□□ -0.55
RAPGEF4-208ENST00000473003 NBPF1Q3BBV0 1214 aa11.6□□□□□ -0.55
RAPGEF4-208ENST00000473003 CD163L1Q9NR16 1453 aa11.59□□□□□ -0.55
RAPGEF4-208ENST00000473003 SBNO2Q9Y2G9 1366 aa11.59□□□□□ -0.55
RAPGEF4-208ENST00000473003 ITGB4P16144 1822 aa11.59□□□□□ -0.55
RAPGEF4-208ENST00000473003 RASSF10A6NK89 507 aa11.59□□□□□ -0.55
RAPGEF4-208ENST00000473003 GYS1P13807 737 aa11.59□□□□□ -0.55
RAPGEF4-208ENST00000473003 CHRNA5P30532 468 aa11.59□□□□□ -0.55
RAPGEF4-208ENST00000473003 RGPD2P0DJD1 1756 aa11.59□□□□□ -0.55
RAPGEF4-208ENST00000473003 TRAPPC3LQ5T215 181 aa11.58□□□□□ -0.56
RAPGEF4-208ENST00000473003 DPY19L2Q6NUT2 758 aa11.58□□□□□ -0.56
RAPGEF4-208ENST00000473003 PIGBQ92521 554 aa11.58□□□□□ -0.56
RAPGEF4-208ENST00000473003 MCOLN1Q9GZU1 580 aa11.58□□□□□ -0.56
RAPGEF4-208ENST00000473003 RAPGEF4Q8WZA2 1011 aa11.57□□□□□ -0.56
RAPGEF4-208ENST00000473003 RTCBQ9Y3I0 505 aaKnown RBP11.57□□□□□ -0.56
RAPGEF4-208ENST00000473003 WDR33Q9C0J8 1336 aaKnown RBP11.57□□□□□ -0.56
RAPGEF4-208ENST00000473003 LDHDQ86WU2 507 aa11.56□□□□□ -0.56
RAPGEF4-208ENST00000473003 ARHGEF1Q92888 912 aaKnown RBP11.56□□□□□ -0.56
RAPGEF4-208ENST00000473003 LTBP1Q14766 1721 aa11.55□□□□□ -0.56
RAPGEF4-208ENST00000473003 NFKBIEO00221 500 aa11.55□□□□□ -0.56
RAPGEF4-208ENST00000473003 CYP27B1O15528 508 aa11.55□□□□□ -0.56
RAPGEF4-208ENST00000473003 HOXC9P31274 260 aa11.55□□□□□ -0.56
RAPGEF4-208ENST00000473003 ATP6V1AP38606 617 aa11.55□□□□□ -0.56
RAPGEF4-208ENST00000473003 DEFB115Q30KQ5 88 aa11.55□□□□□ -0.56
RAPGEF4-208ENST00000473003 ITGBL1O95965 494 aaPredicted RBP11.54□□□□□ -0.56
RAPGEF4-208ENST00000473003 TATP17735 454 aaPredicted RBP11.54□□□□□ -0.56
RAPGEF4-208ENST00000473003 DDR1Q08345 913 aa11.54□□□□□ -0.56
RAPGEF4-208ENST00000473003 BEGAINQ9BUH8 593 aa11.54□□□□□ -0.56
RAPGEF4-208ENST00000473003 MAP3K19Q56UN5 1328 aa11.54□□□□□ -0.56
RAPGEF4-208ENST00000473003 KDRP35968 1356 aa11.54□□□□□ -0.56
RAPGEF4-208ENST00000473003 EDC4Q6P2E9 1401 aaKnown RBP11.53□□□□□ -0.56
RAPGEF4-208ENST00000473003 SMG6Q86US8 1419 aaKnown RBP11.53□□□□□ -0.56
RAPGEF4-208ENST00000473003 RFC4P35249 363 aa11.53□□□□□ -0.56
RAPGEF4-208ENST00000473003 NBPF6Q5VWK0 638 aa11.53□□□□□ -0.56
RAPGEF4-208ENST00000473003 USHBP1Q8N6Y0 703 aa11.53□□□□□ -0.56
RAPGEF4-208ENST00000473003 NBPF4Q96M43 638 aa11.53□□□□□ -0.56
RAPGEF4-208ENST00000473003 ASAP1Q9ULH1 1129 aa11.52□□□□□ -0.57
RAPGEF4-208ENST00000473003 RTL1A6NKG5 1358 aa11.52□□□□□ -0.57
RAPGEF4-208ENST00000473003 DLEC1Q9Y238 1755 aa11.51□□□□□ -0.57
RAPGEF4-208ENST00000473003 CCDC88AQ3V6T2 1871 aa11.51□□□□□ -0.57
RAPGEF4-208ENST00000473003 IQCA1LA6NCM1 817 aa11.51□□□□□ -0.57
RAPGEF4-208ENST00000473003 ERFEQ4G0M1 354 aa11.51□□□□□ -0.57
RAPGEF4-208ENST00000473003 RC3H1Q5TC82 1133 aaKnown RBP11.51□□□□□ -0.57
RAPGEF4-208ENST00000473003 TSKSQ9UJT2 592 aa11.51□□□□□ -0.57
RAPGEF4-208ENST00000473003 ZNF831Q5JPB2 1677 aa11.51□□□□□ -0.57
RAPGEF4-208ENST00000473003 CNTNAP4Q9C0A0 1308 aa11.51□□□□□ -0.57
RAPGEF4-208ENST00000473003 COL5A3P25940 1745 aaPredicted RBP11.5□□□□□ -0.57
RAPGEF4-208ENST00000473003 AMPHP49418 695 aa11.5□□□□□ -0.57
RAPGEF4-208ENST00000473003 DGKZQ13574 1117 aa11.5□□□□□ -0.57
RAPGEF4-208ENST00000473003 NKX1-1Q15270 411 aaPredicted RBP11.5□□□□□ -0.57
RAPGEF4-208ENST00000473003 TAF1DQ9H5J8 278 aaPredicted RBP11.5□□□□□ -0.57
RAPGEF4-208ENST00000473003 TMOD3Q9NYL9 352 aa11.5□□□□□ -0.57
RAPGEF4-208ENST00000473003 ADAMTSL1Q8N6G6 1762 aa11.49□□□□□ -0.57
RAPGEF4-208ENST00000473003 POLRMTO00411 1230 aaKnown RBP11.49□□□□□ -0.57
RAPGEF4-208ENST00000473003 RPS6KA4O75676 772 aa11.49□□□□□ -0.57
RAPGEF4-208ENST00000473003 DDNO94850 711 aaPredicted RBP11.49□□□□□ -0.57
RAPGEF4-208ENST00000473003 SOX10P56693 466 aa11.49□□□□□ -0.57
RAPGEF4-208ENST00000473003 FKBP8Q14318 412 aa11.49□□□□□ -0.57
RAPGEF4-208ENST00000473003 TTLL6Q8N841 843 aa11.49□□□□□ -0.57
RAPGEF4-208ENST00000473003 CAPNS2Q96L46 248 aa11.49□□□□□ -0.57
RAPGEF4-208ENST00000473003 ABT1Q9ULW3 272 aaKnown RBP11.49□□□□□ -0.57
RAPGEF4-208ENST00000473003 DICER1Q9UPY3 1922 aaKnown RBP11.48□□□□□ -0.57
RAPGEF4-208ENST00000473003 ECE1P42892 770 aa11.48□□□□□ -0.57
RAPGEF4-208ENST00000473003 GCC1Q96CN9 775 aa11.48□□□□□ -0.57
RAPGEF4-208ENST00000473003 L3MBTL3Q96JM7 780 aaPredicted RBP11.48□□□□□ -0.57
RAPGEF4-208ENST00000473003 SRP68Q9UHB9 627 aaKnown RBP11.48□□□□□ -0.57
RAPGEF4-208ENST00000473003 USP42Q9H9J4 1324 aaKnown RBP11.48□□□□□ -0.57
RAPGEF4-208ENST00000473003 SCN4AP35499 1836 aa11.48□□□□□ -0.57
RAPGEF4-208ENST00000473003 CA12O43570 354 aa11.47□□□□□ -0.57
RAPGEF4-208ENST00000473003 HDGFL2Q7Z4V5 671 aaPredicted RBP11.47□□□□□ -0.57
RAPGEF4-208ENST00000473003 SLC4A9Q96Q91 983 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms