RNA–Protein interactions for RNA: ENST00000472921.1

CCDC13-204, Transcript of coiled-coil domain containing 13, humanhuman

TSL 5

Gene CCDC13, Length 314 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-204ENST00000472921 BTBD11A6QL63 1104 aa15.59■□□□□ 0.09
CCDC13-204ENST00000472921 CABP4P57796 275 aa15.59■□□□□ 0.09
CCDC13-204ENST00000472921 NFATC2IPQ8NCF5 419 aa15.59■□□□□ 0.09
CCDC13-204ENST00000472921 RCAN3Q9UKA8 241 aa15.58■□□□□ 0.08
CCDC13-204ENST00000472921 SCN11AQ9UI33 1791 aa15.57■□□□□ 0.08
CCDC13-204ENST00000472921 VAMP4O75379 141 aa15.57■□□□□ 0.08
CCDC13-204ENST00000472921 SEPT12Q8IYM1 358 aa15.57■□□□□ 0.08
CCDC13-204ENST00000472921 MIS18AQ9NYP9 233 aa15.57■□□□□ 0.08
CCDC13-204ENST00000472921 RGS17Q9UGC6 210 aaPredicted RBP15.57■□□□□ 0.08
CCDC13-204ENST00000472921 RNF123Q5XPI4 1314 aa15.57■□□□□ 0.08
CCDC13-204ENST00000472921 HEG1Q9ULI3 1381 aa15.57■□□□□ 0.08
CCDC13-204ENST00000472921 EIF4A1P60842 406 aaKnown RBP15.56■□□□□ 0.08
CCDC13-204ENST00000472921 ZNF790Q6PG37 636 aa15.56■□□□□ 0.08
CCDC13-204ENST00000472921 HOXB7P09629 217 aa15.55■□□□□ 0.08
CCDC13-204ENST00000472921 BRPF1P55201 1214 aaPredicted RBP15.55■□□□□ 0.08
CCDC13-204ENST00000472921 ALDH1L2Q3SY69 923 aa15.55■□□□□ 0.08
CCDC13-204ENST00000472921 C8orf58Q8NAV2 365 aa15.55■□□□□ 0.08
CCDC13-204ENST00000472921 CHMP4AQ9BY43 222 aa15.55■□□□□ 0.08
CCDC13-204ENST00000472921 SIPA1L3O60292 1781 aaPredicted RBP15.54■□□□□ 0.08
CCDC13-204ENST00000472921 RXRBP28702 533 aa15.54■□□□□ 0.08
CCDC13-204ENST00000472921 RARSP54136 660 aaKnown RBP15.54■□□□□ 0.08
CCDC13-204ENST00000472921 TWISTNBQ3B726 338 aaPredicted RBP15.54■□□□□ 0.08
CCDC13-204ENST00000472921 TSPYL6Q8N831 410 aa15.54■□□□□ 0.08
CCDC13-204ENST00000472921 PIGBQ92521 554 aa15.53■□□□□ 0.08
CCDC13-204ENST00000472921 TMOD3Q9NYL9 352 aa15.53■□□□□ 0.08
CCDC13-204ENST00000472921 KCNQ3O43525 872 aa15.52■□□□□ 0.08
CCDC13-204ENST00000472921 ILDR1Q86SU0 546 aaPredicted RBP15.52■□□□□ 0.08
CCDC13-204ENST00000472921 SUPT16HQ9Y5B9 1047 aaKnown RBP15.52■□□□□ 0.08
CCDC13-204ENST00000472921 KDM3BQ7LBC6 1761 aa15.52■□□□□ 0.07
CCDC13-204ENST00000472921 PRIM1P49642 420 aaKnown RBP15.51■□□□□ 0.07
CCDC13-204ENST00000472921 A0A0G2JS52 829 aa15.5■□□□□ 0.07
CCDC13-204ENST00000472921 GIGYF1O75420 1035 aaPredicted RBP15.5■□□□□ 0.07
CCDC13-204ENST00000472921 MYT1Q01538 1121 aa15.5■□□□□ 0.07
CCDC13-204ENST00000472921 SLC39A6Q13433 755 aa15.5■□□□□ 0.07
CCDC13-204ENST00000472921 POTEAQ6S8J7 498 aa15.5■□□□□ 0.07
CCDC13-204ENST00000472921 TTC5Q8N0Z6 440 aa15.5■□□□□ 0.07
CCDC13-204ENST00000472921 FMNL2Q96PY5 1086 aa15.5■□□□□ 0.07
CCDC13-204ENST00000472921 TOGARAM1Q9Y4F4 1720 aa15.5■□□□□ 0.07
CCDC13-204ENST00000472921 KRT24Q2M2I5 525 aa15.49■□□□□ 0.07
CCDC13-204ENST00000472921 KRT27Q7Z3Y8 459 aa15.49■□□□□ 0.07
CCDC13-204ENST00000472921 VSIG10Q8N0Z9 540 aa15.49■□□□□ 0.07
CCDC13-204ENST00000472921 ATG3Q9NT62 314 aa15.49■□□□□ 0.07
CCDC13-204ENST00000472921 ELL2O00472 640 aaPredicted RBP15.48■□□□□ 0.07
CCDC13-204ENST00000472921 SNRPA1P09661 255 aaKnown RBP15.48■□□□□ 0.07
CCDC13-204ENST00000472921 SSH1Q8WYL5 1049 aa15.48■□□□□ 0.07
CCDC13-204ENST00000472921 ZNF496Q96IT1 587 aaPredicted RBP15.48■□□□□ 0.07
CCDC13-204ENST00000472921 VIRMAQ69YN4 1812 aaKnown RBP15.47■□□□□ 0.07
CCDC13-204ENST00000472921 BCAR3O75815 825 aa15.47■□□□□ 0.07
CCDC13-204ENST00000472921 CCDC30Q5VVM6 783 aa15.47■□□□□ 0.07
CCDC13-204ENST00000472921 FAM196AQ6ZSG2 479 aa15.47■□□□□ 0.07
CCDC13-204ENST00000472921 MRPL50Q8N5N7 158 aaKnown RBP15.47■□□□□ 0.07
CCDC13-204ENST00000472921 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.47■□□□□ 0.07
CCDC13-204ENST00000472921 PAPPAQ13219 1627 aa15.46■□□□□ 0.07
CCDC13-204ENST00000472921 RRP1P56182 461 aaKnown RBP15.46■□□□□ 0.07
CCDC13-204ENST00000472921 ARHGAP45Q92619 1136 aa15.46■□□□□ 0.07
CCDC13-204ENST00000472921 SMARCC1Q92922 1105 aaPredicted RBP15.46■□□□□ 0.07
CCDC13-204ENST00000472921 TEX13AQ9BXU3 409 aaPredicted RBP15.46■□□□□ 0.07
CCDC13-204ENST00000472921 ASAP1Q9ULH1 1129 aa15.46■□□□□ 0.07
CCDC13-204ENST00000472921 KCPQ6ZWJ8 1503 aa15.45■□□□□ 0.06
CCDC13-204ENST00000472921 ACSBG1Q96GR2 724 aa15.45■□□□□ 0.06
CCDC13-204ENST00000472921 KCNQ2O43526 872 aa15.44■□□□□ 0.06
CCDC13-204ENST00000472921 SYTL4Q96C24 671 aaPredicted RBP15.44■□□□□ 0.06
CCDC13-204ENST00000472921 BCL11BQ9C0K0 894 aaPredicted RBP15.44■□□□□ 0.06
CCDC13-204ENST00000472921 SMC4Q9NTJ3 1288 aa15.44■□□□□ 0.06
CCDC13-204ENST00000472921 KIF16BQ96L93 1317 aa15.43■□□□□ 0.06
CCDC13-204ENST00000472921 DOT1LQ8TEK3 1739 aa15.43■□□□□ 0.06
CCDC13-204ENST00000472921 HDGFL1Q5TGJ6 251 aa15.43■□□□□ 0.06
CCDC13-204ENST00000472921 RGS12O14924 1447 aa15.43■□□□□ 0.06
CCDC13-204ENST00000472921 ERBB4Q15303 1308 aa15.43■□□□□ 0.06
CCDC13-204ENST00000472921 UBR2Q8IWV8 1755 aa15.42■□□□□ 0.06
CCDC13-204ENST00000472921 IPO8O15397 1037 aaKnown RBP15.42■□□□□ 0.06
CCDC13-204ENST00000472921 PDE3AQ14432 1141 aa15.42■□□□□ 0.06
CCDC13-204ENST00000472921 STK31Q9BXU1 1019 aa15.42■□□□□ 0.06
CCDC13-204ENST00000472921 ITGB4P16144 1822 aa15.42■□□□□ 0.06
CCDC13-204ENST00000472921 PRAMEF22A3QJZ6 481 aa15.41■□□□□ 0.06
CCDC13-204ENST00000472921 SLC4A2P04920 1241 aa15.41■□□□□ 0.06
CCDC13-204ENST00000472921 MS4A1P11836 297 aa15.41■□□□□ 0.06
CCDC13-204ENST00000472921 DBF4Q9UBU7 674 aaPredicted RBP15.41■□□□□ 0.06
CCDC13-204ENST00000472921 NOB1Q9ULX3 412 aaKnown RBP15.41■□□□□ 0.06
CCDC13-204ENST00000472921 USP16Q9Y5T5 823 aa15.41■□□□□ 0.06
CCDC13-204ENST00000472921 PTCD1O75127 700 aaKnown RBP15.4■□□□□ 0.06
CCDC13-204ENST00000472921 EIF2S2P20042 333 aaKnown RBP15.4■□□□□ 0.06
CCDC13-204ENST00000472921 FAM182BQ5T319 152 aa15.4■□□□□ 0.06
CCDC13-204ENST00000472921 ERICH6BQ5W0A0 696 aa15.4■□□□□ 0.06
CCDC13-204ENST00000472921 ZKSCAN2Q63HK3 967 aa15.4■□□□□ 0.06
CCDC13-204ENST00000472921 SLC4A9Q96Q91 983 aa15.4■□□□□ 0.06
CCDC13-204ENST00000472921 BCL2L13Q9BXK5 485 aa15.4■□□□□ 0.06
CCDC13-204ENST00000472921 DDX21Q9NR30 783 aaKnown RBP eCLIP15.4■□□□□ 0.06
CCDC13-204ENST00000472921 NHSQ6T4R5 1651 aa15.4■□□□□ 0.06
CCDC13-204ENST00000472921 PTPRCP08575 1304 aa15.4■□□□□ 0.06
CCDC13-204ENST00000472921 PDIA6Q15084 440 aa15.39■□□□□ 0.05
CCDC13-204ENST00000472921 ATF7IPQ6VMQ6 1270 aa15.39■□□□□ 0.05
CCDC13-204ENST00000472921 PALLDQ8WX93 1383 aa15.38■□□□□ 0.05
CCDC13-204ENST00000472921 LOC102724428A0A0B4J2F2 783 aa15.38■□□□□ 0.05
CCDC13-204ENST00000472921 PLIN1O60240 522 aa15.38■□□□□ 0.05
CCDC13-204ENST00000472921 STARD3NLO95772 234 aa15.38■□□□□ 0.05
CCDC13-204ENST00000472921 SIK1P57059 783 aa15.38■□□□□ 0.05
CCDC13-204ENST00000472921 RBM42Q9BTD8 480 aaKnown RBP15.38■□□□□ 0.05
CCDC13-204ENST00000472921 API5Q9BZZ5 524 aaKnown RBP15.38■□□□□ 0.05
CCDC13-204ENST00000472921 HYPKQ9NX55 129 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms