RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 MYT1Q01538 1121 aa6.08□□□□□ -1.44
TM4SF1-202ENST00000472441 FLIIQ13045 1269 aa6.08□□□□□ -1.44
TM4SF1-202ENST00000472441 NFAT5O94916 1531 aa6.08□□□□□ -1.44
TM4SF1-202ENST00000472441 AKAP4Q5JQC9 854 aa6.08□□□□□ -1.44
TM4SF1-202ENST00000472441 CADPS2Q86UW7 1296 aa6.08□□□□□ -1.44
TM4SF1-202ENST00000472441 PHAXQ9H814 394 aaKnown RBP6.08□□□□□ -1.44
TM4SF1-202ENST00000472441 RGPD2P0DJD1 1756 aa6.08□□□□□ -1.44
TM4SF1-202ENST00000472441 ANXA1P04083 346 aa6.08□□□□□ -1.44
TM4SF1-202ENST00000472441 C16orf71Q8IYS4 520 aaPredicted RBP6.08□□□□□ -1.44
TM4SF1-202ENST00000472441 SMARCA5O60264 1052 aaPredicted RBP6.07□□□□□ -1.44
TM4SF1-202ENST00000472441 AMOTQ4VCS5 1084 aa6.07□□□□□ -1.44
TM4SF1-202ENST00000472441 CEP85Q6P2H3 762 aa6.07□□□□□ -1.44
TM4SF1-202ENST00000472441 ANKRD44Q8N8A2 993 aa6.07□□□□□ -1.44
TM4SF1-202ENST00000472441 TRPM3Q9HCF6 1732 aaPredicted RBP6.07□□□□□ -1.44
TM4SF1-202ENST00000472441 RGS12O14924 1447 aa6.07□□□□□ -1.44
TM4SF1-202ENST00000472441 RNMTO43148 476 aaKnown RBP6.07□□□□□ -1.44
TM4SF1-202ENST00000472441 CCT4P50991 539 aaKnown RBP6.07□□□□□ -1.44
TM4SF1-202ENST00000472441 RTL5Q5HYW3 569 aaPredicted RBP6.07□□□□□ -1.44
TM4SF1-202ENST00000472441 RPAP2Q8IXW5 612 aaPredicted RBP6.07□□□□□ -1.44
TM4SF1-202ENST00000472441 RAPGEF4Q8WZA2 1011 aa6.07□□□□□ -1.44
TM4SF1-202ENST00000472441 EIF4A1P60842 406 aaKnown RBP6.06□□□□□ -1.44
TM4SF1-202ENST00000472441 DCTPP1Q9H773 170 aa6.06□□□□□ -1.44
TM4SF1-202ENST00000472441 NPHP3Q7Z494 1330 aa6.06□□□□□ -1.44
TM4SF1-202ENST00000472441 ABCA3Q99758 1704 aa6.06□□□□□ -1.44
TM4SF1-202ENST00000472441 MST1RQ04912 1400 aa6.06□□□□□ -1.44
TM4SF1-202ENST00000472441 CACNB1Q02641 598 aaPredicted RBP6.06□□□□□ -1.44
TM4SF1-202ENST00000472441 SPRYD3Q8NCJ5 442 aa6.06□□□□□ -1.44
TM4SF1-202ENST00000472441 TBC1D32Q96NH3 1257 aa6.06□□□□□ -1.44
TM4SF1-202ENST00000472441 C22orf23Q9BZE7 217 aa6.06□□□□□ -1.44
TM4SF1-202ENST00000472441 CHPF2Q9P2E5 772 aa6.06□□□□□ -1.44
TM4SF1-202ENST00000472441 GNAI2P04899 355 aa6.05□□□□□ -1.44
TM4SF1-202ENST00000472441 BABAM1Q9NWV8 329 aa6.05□□□□□ -1.44
TM4SF1-202ENST00000472441 KAT6BQ8WYB5 2073 aa6.05□□□□□ -1.44
TM4SF1-202ENST00000472441 MED1Q15648 1581 aaPredicted RBP6.05□□□□□ -1.44
TM4SF1-202ENST00000472441 ERBB3P21860 1342 aa6.05□□□□□ -1.44
TM4SF1-202ENST00000472441 A0A0G2JS52 829 aa6.05□□□□□ -1.44
TM4SF1-202ENST00000472441 PRAMEF22A3QJZ6 481 aa6.05□□□□□ -1.44
TM4SF1-202ENST00000472441 HMMRO75330 724 aa6.05□□□□□ -1.44
TM4SF1-202ENST00000472441 BECN1Q14457 450 aa6.05□□□□□ -1.44
TM4SF1-202ENST00000472441 OTUD7AQ8TE49 926 aaPredicted RBP6.05□□□□□ -1.44
TM4SF1-202ENST00000472441 USP35Q9P2H5 1018 aa6.05□□□□□ -1.44
TM4SF1-202ENST00000472441 EXOC6BQ9Y2D4 811 aa6.05□□□□□ -1.44
TM4SF1-202ENST00000472441 CEMIPQ8WUJ3 1361 aa6.05□□□□□ -1.44
TM4SF1-202ENST00000472441 TATP17735 454 aaPredicted RBP6.05□□□□□ -1.44
TM4SF1-202ENST00000472441 SLC39A6Q13433 755 aa6.05□□□□□ -1.44
TM4SF1-202ENST00000472441 SLKQ9H2G2 1235 aaPredicted RBP6.05□□□□□ -1.44
TM4SF1-202ENST00000472441 ZNF335Q9H4Z2 1342 aaPredicted RBP6.05□□□□□ -1.44
TM4SF1-202ENST00000472441 ALS2Q96Q42 1657 aa6.04□□□□□ -1.44
TM4SF1-202ENST00000472441 RGPD5Q99666 1765 aa6.04□□□□□ -1.44
TM4SF1-202ENST00000472441 VIRMAQ69YN4 1812 aaKnown RBP6.04□□□□□ -1.44
TM4SF1-202ENST00000472441 GNAI3P08754 354 aa6.04□□□□□ -1.44
TM4SF1-202ENST00000472441 BMP2KLQ5H9B9 411 aa6.04□□□□□ -1.44
TM4SF1-202ENST00000472441 PLEKHM2Q8IWE5 1019 aa6.04□□□□□ -1.44
TM4SF1-202ENST00000472441 LRRFIP2Q9Y608 721 aaKnown RBP6.04□□□□□ -1.44
TM4SF1-202ENST00000472441 PI4KAP2A4QPH2 592 aa6.04□□□□□ -1.44
TM4SF1-202ENST00000472441 AIMP1Q12904 312 aaKnown RBP6.04□□□□□ -1.44
TM4SF1-202ENST00000472441 BRINP3Q76B58 766 aa6.04□□□□□ -1.44
TM4SF1-202ENST00000472441 PI4KAP1Q8N8J0 262 aa6.04□□□□□ -1.44
TM4SF1-202ENST00000472441 NFATC2IPQ8NCF5 419 aa6.04□□□□□ -1.44
TM4SF1-202ENST00000472441 PXDNQ92626 1479 aa6.04□□□□□ -1.44
TM4SF1-202ENST00000472441 SLIT3O75094 1523 aa6.04□□□□□ -1.44
TM4SF1-202ENST00000472441 PNMA6EA0A0J9YXQ4 647 aa6.03□□□□□ -1.44
TM4SF1-202ENST00000472441 UBTFL1P0CB47 393 aaPredicted RBP6.03□□□□□ -1.44
TM4SF1-202ENST00000472441 SRCIN1Q9C0H9 1055 aa6.03□□□□□ -1.44
TM4SF1-202ENST00000472441 USP44Q9H0E7 712 aa6.03□□□□□ -1.44
TM4SF1-202ENST00000472441 ATP10DQ9P241 1426 aa6.03□□□□□ -1.44
TM4SF1-202ENST00000472441 SLAIN2Q9P270 581 aa6.03□□□□□ -1.44
TM4SF1-202ENST00000472441 ROBO1Q9Y6N7 1651 aa6.03□□□□□ -1.44
TM4SF1-202ENST00000472441 COL16A1Q07092 1604 aaPredicted RBP6.03□□□□□ -1.44
TM4SF1-202ENST00000472441 SPATA31A3Q5VYP0 1347 aa6.03□□□□□ -1.44
TM4SF1-202ENST00000472441 GSPT1P15170 499 aaKnown RBP6.03□□□□□ -1.44
TM4SF1-202ENST00000472441 TBC1D9Q6ZT07 1266 aa6.03□□□□□ -1.44
TM4SF1-202ENST00000472441 PRDM11Q9NQV5 511 aa6.03□□□□□ -1.44
TM4SF1-202ENST00000472441 SPG7Q9UQ90 795 aa6.03□□□□□ -1.44
TM4SF1-202ENST00000472441 PHRF1Q9P1Y6 1649 aaKnown RBP6.03□□□□□ -1.44
TM4SF1-202ENST00000472441 SOS1Q07889 1333 aaPredicted RBP6.03□□□□□ -1.44
TM4SF1-202ENST00000472441 GIGYF1O75420 1035 aaPredicted RBP6.03□□□□□ -1.44
TM4SF1-202ENST00000472441 PROSER3Q2NL68 480 aa6.03□□□□□ -1.44
TM4SF1-202ENST00000472441 DNAAF4Q8WXU2 420 aa6.03□□□□□ -1.44
TM4SF1-202ENST00000472441 TBC1D2Q9BYX2 928 aa6.03□□□□□ -1.44
TM4SF1-202ENST00000472441 DBF4Q9UBU7 674 aaPredicted RBP6.03□□□□□ -1.44
TM4SF1-202ENST00000472441 LRRC37A3O60309 1634 aa6.02□□□□□ -1.44
TM4SF1-202ENST00000472441 MYL6BP14649 208 aa6.02□□□□□ -1.45
TM4SF1-202ENST00000472441 ATP8B2P98198 1209 aa6.02□□□□□ -1.45
TM4SF1-202ENST00000472441 TSHZ3Q63HK5 1081 aa6.02□□□□□ -1.45
TM4SF1-202ENST00000472441 TOM1L2Q6ZVM7 507 aa6.02□□□□□ -1.45
TM4SF1-202ENST00000472441 IFNL2Q8IZJ0 200 aa6.02□□□□□ -1.45
TM4SF1-202ENST00000472441 TNS3Q68CZ2 1445 aa6.02□□□□□ -1.45
TM4SF1-202ENST00000472441 NBPF7P0C2Y1 421 aaPredicted RBP6.02□□□□□ -1.45
TM4SF1-202ENST00000472441 PHKG2P15735 406 aa6.02□□□□□ -1.45
TM4SF1-202ENST00000472441 NFKBIBQ15653 356 aa6.02□□□□□ -1.45
TM4SF1-202ENST00000472441 TTC22Q5TAA0 569 aa6.02□□□□□ -1.45
TM4SF1-202ENST00000472441 CHMP4AQ9BY43 222 aa6.02□□□□□ -1.45
TM4SF1-202ENST00000472441 STRN4Q9NRL3 753 aa6.02□□□□□ -1.45
TM4SF1-202ENST00000472441 ABCC6O95255 1503 aa6.02□□□□□ -1.45
TM4SF1-202ENST00000472441 PHLPP1O60346 1717 aa6.02□□□□□ -1.45
TM4SF1-202ENST00000472441 CDC45O75419 566 aa6.01□□□□□ -1.45
TM4SF1-202ENST00000472441 HOXB7P09629 217 aa6.01□□□□□ -1.45
TM4SF1-202ENST00000472441 PIP4K2AP48426 406 aaPredicted RBP6.01□□□□□ -1.45
TM4SF1-202ENST00000472441 ZNF790Q6PG37 636 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms