RNA–Protein interactions for RNA: ENST00000472219.5

SNX21-209, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 1,858 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-209ENST00000472219 SKOR2Q2VWA4 1001 aaPredicted RBP25.62■■□□□ 1.69
SNX21-209ENST00000472219 KCNH5Q8NCM2 988 aa25.62■■□□□ 1.69
SNX21-209ENST00000472219 TNPO1Q92973 898 aaKnown RBP25.62■■□□□ 1.69
SNX21-209ENST00000472219 ISY1Q9ULR0 285 aaKnown RBP25.62■■□□□ 1.69
SNX21-209ENST00000472219 ZNF142P52746 1687 aaPredicted RBP25.61■■□□□ 1.69
SNX21-209ENST00000472219 LTV1Q96GA3 475 aaPredicted RBP25.61■■□□□ 1.69
SNX21-209ENST00000472219 PDE1AP54750 535 aa25.6■■□□□ 1.69
SNX21-209ENST00000472219 LRRCC1Q9C099 1032 aa25.6■■□□□ 1.69
SNX21-209ENST00000472219 ERC2O15083 957 aa25.59■■□□□ 1.69
SNX21-209ENST00000472219 CD2BP2O95400 341 aaKnown RBP25.59■■□□□ 1.69
SNX21-209ENST00000472219 ATP8B2P98198 1209 aa25.59■■□□□ 1.69
SNX21-209ENST00000472219 ADGRL3Q9HAR2 1447 aa25.58■■□□□ 1.69
SNX21-209ENST00000472219 NFAT5O94916 1531 aa25.58■■□□□ 1.69
SNX21-209ENST00000472219 ST18O60284 1047 aa25.58■■□□□ 1.69
SNX21-209ENST00000472219 HOXB7P09629 217 aa25.58■■□□□ 1.69
SNX21-209ENST00000472219 CEMIPQ8WUJ3 1361 aa25.57■■□□□ 1.68
SNX21-209ENST00000472219 RBM42Q9BTD8 480 aaKnown RBP25.57■■□□□ 1.68
SNX21-209ENST00000472219 SRCIN1Q9C0H9 1055 aa25.57■■□□□ 1.68
SNX21-209ENST00000472219 PHRF1Q9P1Y6 1649 aaKnown RBP25.57■■□□□ 1.68
SNX21-209ENST00000472219 FSD2A1L4K1 749 aa25.57■■□□□ 1.68
SNX21-209ENST00000472219 GOLGA6L22H0YM25 854 aa25.57■■□□□ 1.68
SNX21-209ENST00000472219 HDGFL1Q5TGJ6 251 aa25.57■■□□□ 1.68
SNX21-209ENST00000472219 PSME1Q06323 249 aa25.55■■□□□ 1.68
SNX21-209ENST00000472219 IBTKQ9P2D0 1353 aaPredicted RBP25.54■■□□□ 1.68
SNX21-209ENST00000472219 MED1Q15648 1581 aaPredicted RBP25.54■■□□□ 1.68
SNX21-209ENST00000472219 UBTFL1P0CB47 393 aaPredicted RBP25.53■■□□□ 1.68
SNX21-209ENST00000472219 CLEC17AQ6ZS10 378 aa25.53■■□□□ 1.68
SNX21-209ENST00000472219 EXOC6BQ9Y2D4 811 aa25.53■■□□□ 1.68
SNX21-209ENST00000472219 MX1P20591 662 aa25.53■■□□□ 1.68
SNX21-209ENST00000472219 NUCB2P80303 420 aa25.53■■□□□ 1.68
SNX21-209ENST00000472219 CWC22Q9HCG8 908 aaKnown RBP25.53■■□□□ 1.68
SNX21-209ENST00000472219 AOX1Q06278 1338 aa25.53■■□□□ 1.68
SNX21-209ENST00000472219 GZF1Q9H116 711 aaPredicted RBP25.52■■□□□ 1.68
SNX21-209ENST00000472219 SALL3Q9BXA9 1300 aa25.52■■□□□ 1.68
SNX21-209ENST00000472219 NECTIN2Q92692 538 aa25.51■■□□□ 1.67
SNX21-209ENST00000472219 ESCO1Q5FWF5 840 aa25.51■■□□□ 1.67
SNX21-209ENST00000472219 RTN4Q9NQC3 1192 aaKnown RBP25.51■■□□□ 1.67
SNX21-209ENST00000472219 LRRFIP2Q9Y608 721 aaKnown RBP25.51■■□□□ 1.67
SNX21-209ENST00000472219 MRE11P49959 708 aa25.5■■□□□ 1.67
SNX21-209ENST00000472219 FAM43AQ8N2R8 423 aa25.5■■□□□ 1.67
SNX21-209ENST00000472219 USHBP1Q8N6Y0 703 aa25.5■■□□□ 1.67
SNX21-209ENST00000472219 FOXD4L1Q9NU39 408 aa25.5■■□□□ 1.67
SNX21-209ENST00000472219 LMO7Q8WWI1 1683 aa25.5■■□□□ 1.67
SNX21-209ENST00000472219 MCCP23508 829 aa25.49■■□□□ 1.67
SNX21-209ENST00000472219 AMOTQ4VCS5 1084 aa25.49■■□□□ 1.67
SNX21-209ENST00000472219 PLEKHO1Q53GL0 409 aaPredicted RBP25.49■■□□□ 1.67
SNX21-209ENST00000472219 STAP2Q9UGK3 403 aa25.49■■□□□ 1.67
SNX21-209ENST00000472219 KDM3BQ7LBC6 1761 aa25.49■■□□□ 1.67
SNX21-209ENST00000472219 NCAPD2Q15021 1401 aa25.49■■□□□ 1.67
SNX21-209ENST00000472219 RAB11FIP3O75154 756 aa25.49■■□□□ 1.67
SNX21-209ENST00000472219 USP44Q9H0E7 712 aa25.49■■□□□ 1.67
SNX21-209ENST00000472219 PNMA6EA0A0J9YXQ4 647 aa25.48■■□□□ 1.67
SNX21-209ENST00000472219 AKAP4Q5JQC9 854 aa25.48■■□□□ 1.67
SNX21-209ENST00000472219 NBPF6Q5VWK0 638 aa25.48■■□□□ 1.67
SNX21-209ENST00000472219 NBPF4Q96M43 638 aa25.48■■□□□ 1.67
SNX21-209ENST00000472219 OVOS2A0A0G2JMS6 1433 aa25.47■■□□□ 1.67
SNX21-209ENST00000472219 TUBGCP6Q96RT7 1819 aa25.47■■□□□ 1.67
SNX21-209ENST00000472219 EIF4A1P60842 406 aaKnown RBP25.47■■□□□ 1.67
SNX21-209ENST00000472219 TEFQ10587 303 aa25.47■■□□□ 1.67
SNX21-209ENST00000472219 SSH3Q8TE77 659 aa25.47■■□□□ 1.67
SNX21-209ENST00000472219 MCM2P49736 904 aa25.46■■□□□ 1.67
SNX21-209ENST00000472219 EPB41L2O43491 1005 aaKnown RBP25.45■■□□□ 1.67
SNX21-209ENST00000472219 XRCC6P12956 609 aaKnown RBP eCLIP25.45■■□□□ 1.66
SNX21-209ENST00000472219 TRHP20396 242 aaPredicted RBP25.45■■□□□ 1.66
SNX21-209ENST00000472219 ESYT1Q9BSJ8 1104 aa25.45■■□□□ 1.66
SNX21-209ENST00000472219 SETD1BQ9UPS6 1966 aaKnown RBP25.44■■□□□ 1.66
SNX21-209ENST00000472219 ZNF530Q6P9A1 599 aaPredicted RBP25.44■■□□□ 1.66
SNX21-209ENST00000472219 SSFA2P28290 1259 aa25.43■■□□□ 1.66
SNX21-209ENST00000472219 ANAPC15P60006 121 aa25.43■■□□□ 1.66
SNX21-209ENST00000472219 SLIT3O75094 1523 aa25.43■■□□□ 1.66
SNX21-209ENST00000472219 PHAXQ9H814 394 aaKnown RBP25.43■■□□□ 1.66
SNX21-209ENST00000472219 TRIM6-TRIM34B2RNG4 842 aa25.42■■□□□ 1.66
SNX21-209ENST00000472219 HSP90AB4PQ58FF6 505 aa25.42■■□□□ 1.66
SNX21-209ENST00000472219 C1orf141Q5JVX7 400 aa25.42■■□□□ 1.66
SNX21-209ENST00000472219 HDAC5Q9UQL6 1122 aa25.42■■□□□ 1.66
SNX21-209ENST00000472219 NPHP4O75161 1426 aaPredicted RBP25.41■■□□□ 1.66
SNX21-209ENST00000472219 BTBD11A6QL63 1104 aa25.41■■□□□ 1.66
SNX21-209ENST00000472219 EIF2S2P20042 333 aaKnown RBP25.41■■□□□ 1.66
SNX21-209ENST00000472219 POLA2Q14181 598 aa25.41■■□□□ 1.66
SNX21-209ENST00000472219 DNAAF4Q8WXU2 420 aa25.41■■□□□ 1.66
SNX21-209ENST00000472219 BAG4O95429 457 aaKnown RBP25.4■■□□□ 1.66
SNX21-209ENST00000472219 LGR6Q9HBX8 967 aa25.4■■□□□ 1.66
SNX21-209ENST00000472219 ZBTB7CA1YPR0 619 aa25.4■■□□□ 1.66
SNX21-209ENST00000472219 CHMLP26374 656 aa25.4■■□□□ 1.66
SNX21-209ENST00000472219 ARHGEF25Q86VW2 580 aa25.39■■□□□ 1.66
SNX21-209ENST00000472219 RILPL2Q969X0 211 aa25.39■■□□□ 1.66
SNX21-209ENST00000472219 GRPEL1Q9HAV7 217 aa25.39■■□□□ 1.66
SNX21-209ENST00000472219 CHPF2Q9P2E5 772 aa25.39■■□□□ 1.66
SNX21-209ENST00000472219 GCP02774 474 aa25.38■■□□□ 1.65
SNX21-209ENST00000472219 PPP1R42Q7Z4L9 355 aa25.38■■□□□ 1.65
SNX21-209ENST00000472219 KIF1BPQ96EK5 621 aa25.38■■□□□ 1.65
SNX21-209ENST00000472219 DBF4Q9UBU7 674 aaPredicted RBP25.38■■□□□ 1.65
SNX21-209ENST00000472219 LMTK3Q96Q04 1460 aa25.38■■□□□ 1.65
SNX21-209ENST00000472219 RGPD2P0DJD1 1756 aa25.38■■□□□ 1.65
SNX21-209ENST00000472219 SURF6O75683 361 aaKnown RBP25.37■■□□□ 1.65
SNX21-209ENST00000472219 CYP2E1P05181 493 aaPredicted RBP25.37■■□□□ 1.65
SNX21-209ENST00000472219 KLHL40Q2TBA0 621 aa25.37■■□□□ 1.65
SNX21-209ENST00000472219 BEND3Q5T5X7 828 aa25.37■■□□□ 1.65
SNX21-209ENST00000472219 ADAMTSL3P82987 1691 aa25.37■■□□□ 1.65
SNX21-209ENST00000472219 CAMTA1Q9Y6Y1 1673 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms