RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 GCP02774 474 aa13.13□□□□□ -0.31
APLF-204ENST00000471727 HDGFL1Q5TGJ6 251 aa13.13□□□□□ -0.31
APLF-204ENST00000471727 F6X3S4 739 aa13.13□□□□□ -0.31
APLF-204ENST00000471727 SRCIN1Q9C0H9 1055 aa13.13□□□□□ -0.31
APLF-204ENST00000471727 LMTK3Q96Q04 1460 aa13.12□□□□□ -0.31
APLF-204ENST00000471727 HSP90AB1P08238 724 aaKnown RBP13.12□□□□□ -0.31
APLF-204ENST00000471727 PTMSP20962 102 aa13.12□□□□□ -0.31
APLF-204ENST00000471727 EIF4A1P60842 406 aaKnown RBP13.12□□□□□ -0.31
APLF-204ENST00000471727 TEFQ10587 303 aa13.12□□□□□ -0.31
APLF-204ENST00000471727 RABEP1Q15276 862 aa13.12□□□□□ -0.31
APLF-204ENST00000471727 IL27Q8NEV9 243 aa13.12□□□□□ -0.31
APLF-204ENST00000471727 C19orf44Q9H6X5 657 aa13.12□□□□□ -0.31
APLF-204ENST00000471727 HDAC5Q9UQL6 1122 aa13.12□□□□□ -0.31
APLF-204ENST00000471727 MED1Q15648 1581 aaPredicted RBP13.12□□□□□ -0.31
APLF-204ENST00000471727 REC8O95072 547 aa13.11□□□□□ -0.31
APLF-204ENST00000471727 C1orf141Q5JVX7 400 aa13.11□□□□□ -0.31
APLF-204ENST00000471727 PROSER2Q86WR7 435 aaPredicted RBP13.11□□□□□ -0.31
APLF-204ENST00000471727 KIF2CQ99661 725 aa13.11□□□□□ -0.31
APLF-204ENST00000471727 LRRCC1Q9C099 1032 aa13.11□□□□□ -0.31
APLF-204ENST00000471727 BCL11AQ9H165 835 aa13.11□□□□□ -0.31
APLF-204ENST00000471727 PLEKHG2Q9H7P9 1386 aa13.11□□□□□ -0.31
APLF-204ENST00000471727 LTN1O94822 1766 aa13.1□□□□□ -0.31
APLF-204ENST00000471727 RAB11FIP3O75154 756 aa13.1□□□□□ -0.31
APLF-204ENST00000471727 ZNF530Q6P9A1 599 aaPredicted RBP13.1□□□□□ -0.31
APLF-204ENST00000471727 KRT28Q7Z3Y7 464 aa13.1□□□□□ -0.31
APLF-204ENST00000471727 KIF1AQ12756 1690 aa13.1□□□□□ -0.31
APLF-204ENST00000471727 FAM208AQ9UK61 1670 aaKnown RBP13.1□□□□□ -0.31
APLF-204ENST00000471727 K7ELQ4 463 aaPredicted RBP13.1□□□□□ -0.31
APLF-204ENST00000471727 UBTFL1P0CB47 393 aaPredicted RBP13.1□□□□□ -0.31
APLF-204ENST00000471727 SDSP20132 328 aa13.1□□□□□ -0.31
APLF-204ENST00000471727 MCM4P33991 863 aa13.1□□□□□ -0.31
APLF-204ENST00000471727 DDIT3P35638 169 aa13.1□□□□□ -0.31
APLF-204ENST00000471727 C16orf71Q8IYS4 520 aaPredicted RBP13.1□□□□□ -0.31
APLF-204ENST00000471727 USHBP1Q8N6Y0 703 aa13.1□□□□□ -0.31
APLF-204ENST00000471727 USP26Q9BXU7 913 aa13.1□□□□□ -0.31
APLF-204ENST00000471727 AOX1Q06278 1338 aa13.09□□□□□ -0.31
APLF-204ENST00000471727 BTBD11A6QL63 1104 aa13.09□□□□□ -0.31
APLF-204ENST00000471727 DDX11L8A8MPP1 907 aa13.09□□□□□ -0.31
APLF-204ENST00000471727 EPB41L2O43491 1005 aaKnown RBP13.09□□□□□ -0.31
APLF-204ENST00000471727 PDE1AP54750 535 aa13.09□□□□□ -0.31
APLF-204ENST00000471727 ANKRD24Q8TF21 1146 aa13.09□□□□□ -0.31
APLF-204ENST00000471727 ORAI2Q96SN7 254 aa13.09□□□□□ -0.31
APLF-204ENST00000471727 IBTKQ9P2D0 1353 aaPredicted RBP13.08□□□□□ -0.32
APLF-204ENST00000471727 RNMTO43148 476 aaKnown RBP13.08□□□□□ -0.32
APLF-204ENST00000471727 SSH3Q8TE77 659 aa13.08□□□□□ -0.32
APLF-204ENST00000471727 USP44Q9H0E7 712 aa13.08□□□□□ -0.32
APLF-204ENST00000471727 STAP2Q9UGK3 403 aa13.08□□□□□ -0.32
APLF-204ENST00000471727 C1orf167Q5SNV9 1468 aa13.08□□□□□ -0.32
APLF-204ENST00000471727 LMO7Q8WWI1 1683 aa13.07□□□□□ -0.32
APLF-204ENST00000471727 ERC2O15083 957 aa13.07□□□□□ -0.32
APLF-204ENST00000471727 SMARCA5O60264 1052 aaPredicted RBP13.07□□□□□ -0.32
APLF-204ENST00000471727 DCCP43146 1447 aa13.07□□□□□ -0.32
APLF-204ENST00000471727 HSP90AB4PQ58FF6 505 aa13.07□□□□□ -0.32
APLF-204ENST00000471727 LGR6Q9HBX8 967 aa13.07□□□□□ -0.32
APLF-204ENST00000471727 N4BP2Q86UW6 1770 aaPredicted RBP13.07□□□□□ -0.32
APLF-204ENST00000471727 SALL3Q9BXA9 1300 aa13.07□□□□□ -0.32
APLF-204ENST00000471727 HSP90AA1P07900 732 aaKnown RBP13.06□□□□□ -0.32
APLF-204ENST00000471727 DNAAF4Q8WXU2 420 aa13.06□□□□□ -0.32
APLF-204ENST00000471727 RBM33Q96EV2 1170 aaKnown RBP13.06□□□□□ -0.32
APLF-204ENST00000471727 GBP4Q96PP9 640 aa13.06□□□□□ -0.32
APLF-204ENST00000471727 DBF4Q9UBU7 674 aaPredicted RBP13.06□□□□□ -0.32
APLF-204ENST00000471727 ZBTB7CA1YPR0 619 aa13.06□□□□□ -0.32
APLF-204ENST00000471727 L1TD1Q5T7N2 865 aaKnown RBP13.06□□□□□ -0.32
APLF-204ENST00000471727 OTUD7AQ8TE49 926 aaPredicted RBP13.06□□□□□ -0.32
APLF-204ENST00000471727 LRRFIP2Q9Y608 721 aaKnown RBP13.06□□□□□ -0.32
APLF-204ENST00000471727 ST18O60284 1047 aa13.05□□□□□ -0.32
APLF-204ENST00000471727 ALDH1L1O75891 902 aa13.05□□□□□ -0.32
APLF-204ENST00000471727 ATF3P18847 181 aa13.05□□□□□ -0.32
APLF-204ENST00000471727 MX1P20591 662 aa13.05□□□□□ -0.32
APLF-204ENST00000471727 POLA2Q14181 598 aa13.05□□□□□ -0.32
APLF-204ENST00000471727 SPRYD3Q8NCJ5 442 aa13.05□□□□□ -0.32
APLF-204ENST00000471727 NECTIN2Q92692 538 aa13.05□□□□□ -0.32
APLF-204ENST00000471727 LRRC59Q96AG4 307 aaKnown RBP13.05□□□□□ -0.32
APLF-204ENST00000471727 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.05□□□□□ -0.32
APLF-204ENST00000471727 HEG1Q9ULI3 1381 aa13.05□□□□□ -0.32
APLF-204ENST00000471727 CAMTA1Q9Y6Y1 1673 aa13.04□□□□□ -0.32
APLF-204ENST00000471727 KDM3BQ7LBC6 1761 aa13.04□□□□□ -0.32
APLF-204ENST00000471727 APBB1O00213 710 aa13.04□□□□□ -0.32
APLF-204ENST00000471727 EIF2S2P20042 333 aaKnown RBP13.04□□□□□ -0.32
APLF-204ENST00000471727 MCCP23508 829 aa13.04□□□□□ -0.32
APLF-204ENST00000471727 RAB3GAP1Q15042 981 aa13.04□□□□□ -0.32
APLF-204ENST00000471727 SKOR2Q2VWA4 1001 aaPredicted RBP13.04□□□□□ -0.32
APLF-204ENST00000471727 BEND3Q5T5X7 828 aa13.04□□□□□ -0.32
APLF-204ENST00000471727 PHAXQ9H814 394 aaKnown RBP13.04□□□□□ -0.32
APLF-204ENST00000471727 EXOC6BQ9Y2D4 811 aa13.04□□□□□ -0.32
APLF-204ENST00000471727 TRPM3Q9HCF6 1732 aaPredicted RBP13.04□□□□□ -0.32
APLF-204ENST00000471727 ABCC6O95255 1503 aa13.03□□□□□ -0.32
APLF-204ENST00000471727 PNMA6EA0A0J9YXQ4 647 aa13.03□□□□□ -0.32
APLF-204ENST00000471727 LMOD2Q6P5Q4 547 aa13.03□□□□□ -0.32
APLF-204ENST00000471727 CWC22Q9HCG8 908 aaKnown RBP13.03□□□□□ -0.32
APLF-204ENST00000471727 HYPKQ9NX55 129 aa13.03□□□□□ -0.32
APLF-204ENST00000471727 MCM2P49736 904 aa13.02□□□□□ -0.32
APLF-204ENST00000471727 ANAPC15P60006 121 aa13.02□□□□□ -0.32
APLF-204ENST00000471727 MPRIPQ6WCQ1 1025 aa13.02□□□□□ -0.32
APLF-204ENST00000471727 KIF1BPQ96EK5 621 aa13.02□□□□□ -0.32
APLF-204ENST00000471727 CHPF2Q9P2E5 772 aa13.02□□□□□ -0.32
APLF-204ENST00000471727 ISY1Q9ULR0 285 aaKnown RBP13.02□□□□□ -0.32
APLF-204ENST00000471727 ERBB3P21860 1342 aa13.02□□□□□ -0.32
APLF-204ENST00000471727 PI4KAP2A4QPH2 592 aa13.02□□□□□ -0.33
APLF-204ENST00000471727 GIGYF1O75420 1035 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms