RNA–Protein interactions for RNA: ENST00000471682.1

COMMD6-208, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-208ENST00000471682 BTAF1O14981 1849 aa20.08■□□□□ 0.8
COMMD6-208ENST00000471682 VIRMAQ69YN4 1812 aaKnown RBP20.08■□□□□ 0.8
COMMD6-208ENST00000471682 RGPD3A6NKT7 1758 aaPredicted RBP20.07■□□□□ 0.8
COMMD6-208ENST00000471682 RGPD4Q7Z3J3 1758 aa20.07■□□□□ 0.8
COMMD6-208ENST00000471682 HMGB2P26583 209 aaKnown RBP20.06■□□□□ 0.8
COMMD6-208ENST00000471682 MCM10Q7L590 875 aa20.06■□□□□ 0.8
COMMD6-208ENST00000471682 TRIM35Q9UPQ4 493 aa20.06■□□□□ 0.8
COMMD6-208ENST00000471682 RRP7AQ9Y3A4 280 aaKnown RBP20.05■□□□□ 0.8
COMMD6-208ENST00000471682 NEUROD2Q15784 382 aa20.04■□□□□ 0.8
COMMD6-208ENST00000471682 BABAM1Q9NWV8 329 aa20.04■□□□□ 0.8
COMMD6-208ENST00000471682 SIPA1L3O60292 1781 aaPredicted RBP20.03■□□□□ 0.8
COMMD6-208ENST00000471682 CALD1Q05682 793 aaKnown RBP20.03■□□□□ 0.8
COMMD6-208ENST00000471682 DCTN1Q14203 1278 aa20.03■□□□□ 0.8
COMMD6-208ENST00000471682 TAF7Q15545 349 aaPredicted RBP20.03■□□□□ 0.8
COMMD6-208ENST00000471682 CAMKK2Q96RR4 588 aa20.03■□□□□ 0.8
COMMD6-208ENST00000471682 SLC27A3Q5K4L6 730 aa20.02■□□□□ 0.8
COMMD6-208ENST00000471682 ATG3Q9NT62 314 aa20.02■□□□□ 0.8
COMMD6-208ENST00000471682 PALLDQ8WX93 1383 aa20.01■□□□□ 0.79
COMMD6-208ENST00000471682 BTBD11A6QL63 1104 aa20■□□□□ 0.79
COMMD6-208ENST00000471682 EN1Q05925 392 aaPredicted RBP20■□□□□ 0.79
COMMD6-208ENST00000471682 ASAP1Q9ULH1 1129 aa20■□□□□ 0.79
COMMD6-208ENST00000471682 LY75O60449 1722 aa19.99■□□□□ 0.79
COMMD6-208ENST00000471682 PAPPAQ13219 1627 aa19.99■□□□□ 0.79
COMMD6-208ENST00000471682 DEFB132Q7Z7B7 95 aa19.99■□□□□ 0.79
COMMD6-208ENST00000471682 WWC1Q8IX03 1113 aa19.99■□□□□ 0.79
COMMD6-208ENST00000471682 TXNRD1Q16881 649 aa19.98■□□□□ 0.79
COMMD6-208ENST00000471682 ZNF790Q6PG37 636 aa19.98■□□□□ 0.79
COMMD6-208ENST00000471682 THUMPD2Q9BTF0 503 aaKnown RBP19.98■□□□□ 0.79
COMMD6-208ENST00000471682 ZNF831Q5JPB2 1677 aa19.97■□□□□ 0.79
COMMD6-208ENST00000471682 WDR63Q8IWG1 891 aa19.97■□□□□ 0.79
COMMD6-208ENST00000471682 TTC5Q8N0Z6 440 aa19.97■□□□□ 0.79
COMMD6-208ENST00000471682 PROM2Q8N271 834 aa19.97■□□□□ 0.79
COMMD6-208ENST00000471682 IL16Q14005 1332 aa19.97■□□□□ 0.79
COMMD6-208ENST00000471682 LOC102724428A0A0B4J2F2 783 aa19.96■□□□□ 0.79
COMMD6-208ENST00000471682 SIK1P57059 783 aa19.96■□□□□ 0.79
COMMD6-208ENST00000471682 EZH2Q15910 746 aaKnown RBP19.96■□□□□ 0.79
COMMD6-208ENST00000471682 VSIG10Q8N0Z9 540 aa19.96■□□□□ 0.79
COMMD6-208ENST00000471682 CFAP44Q96MT7 982 aa19.96■□□□□ 0.79
COMMD6-208ENST00000471682 CHL1O00533 1208 aa19.95■□□□□ 0.78
COMMD6-208ENST00000471682 IFT57Q9NWB7 429 aa19.95■□□□□ 0.78
COMMD6-208ENST00000471682 CCNL1Q9UK58 526 aaPredicted RBP19.95■□□□□ 0.78
COMMD6-208ENST00000471682 RREB1Q92766 1687 aa19.94■□□□□ 0.78
COMMD6-208ENST00000471682 UBR2Q8IWV8 1755 aa19.94■□□□□ 0.78
COMMD6-208ENST00000471682 ZNF853P0CG23 659 aa19.94■□□□□ 0.78
COMMD6-208ENST00000471682 GNAI1P63096 354 aa19.94■□□□□ 0.78
COMMD6-208ENST00000471682 SLC39A6Q13433 755 aa19.94■□□□□ 0.78
COMMD6-208ENST00000471682 KCPQ6ZWJ8 1503 aa19.93■□□□□ 0.78
COMMD6-208ENST00000471682 FMNL2Q96PY5 1086 aa19.93■□□□□ 0.78
COMMD6-208ENST00000471682 CICQ96RK0 1608 aaPredicted RBP19.93■□□□□ 0.78
COMMD6-208ENST00000471682 ZNF521Q96K83 1311 aa19.93■□□□□ 0.78
COMMD6-208ENST00000471682 KDM3BQ7LBC6 1761 aa19.93■□□□□ 0.78
COMMD6-208ENST00000471682 TSPYL4Q9UJ04 414 aa19.92■□□□□ 0.78
COMMD6-208ENST00000471682 ATP6V1AP38606 617 aa19.91■□□□□ 0.78
COMMD6-208ENST00000471682 ZNF496Q96IT1 587 aaPredicted RBP19.91■□□□□ 0.78
COMMD6-208ENST00000471682 RBM42Q9BTD8 480 aaKnown RBP19.91■□□□□ 0.78
COMMD6-208ENST00000471682 TEX13AQ9BXU3 409 aaPredicted RBP19.91■□□□□ 0.78
COMMD6-208ENST00000471682 LRRC4BQ9NT99 713 aa19.91■□□□□ 0.78
COMMD6-208ENST00000471682 PTCD1O75127 700 aaKnown RBP19.9■□□□□ 0.78
COMMD6-208ENST00000471682 SLC4A9Q96Q91 983 aa19.9■□□□□ 0.78
COMMD6-208ENST00000471682 HEG1Q9ULI3 1381 aa19.9■□□□□ 0.78
COMMD6-208ENST00000471682 KCNQ3O43525 872 aa19.89■□□□□ 0.77
COMMD6-208ENST00000471682 EIF4A1P60842 406 aaKnown RBP19.89■□□□□ 0.77
COMMD6-208ENST00000471682 MIS18AQ9NYP9 233 aa19.89■□□□□ 0.77
COMMD6-208ENST00000471682 NUP188Q5SRE5 1749 aa19.88■□□□□ 0.77
COMMD6-208ENST00000471682 SALL2Q9Y467 1007 aaPredicted RBP19.88■□□□□ 0.77
COMMD6-208ENST00000471682 SNRPA1P09661 255 aaKnown RBP19.87■□□□□ 0.77
COMMD6-208ENST00000471682 ITPK1Q13572 414 aa19.87■□□□□ 0.77
COMMD6-208ENST00000471682 NBPF14Q5TI25 921 aa19.87■□□□□ 0.77
COMMD6-208ENST00000471682 MBIPQ9NS73 344 aa19.87■□□□□ 0.77
COMMD6-208ENST00000471682 TAF1LQ8IZX4 1826 aa19.86■□□□□ 0.77
COMMD6-208ENST00000471682 RC3H1Q5TC82 1133 aaKnown RBP19.86■□□□□ 0.77
COMMD6-208ENST00000471682 LAS1LQ9Y4W2 734 aaKnown RBP19.86■□□□□ 0.77
COMMD6-208ENST00000471682 C5P01031 1676 aa19.86■□□□□ 0.77
COMMD6-208ENST00000471682 CNTNAP4Q9C0A0 1308 aa19.85■□□□□ 0.77
COMMD6-208ENST00000471682 SENP3-EIF4A1A0A087X0R7 540 aa19.85■□□□□ 0.77
COMMD6-208ENST00000471682 STARD3NLO95772 234 aa19.85■□□□□ 0.77
COMMD6-208ENST00000471682 GOLGA2Q08379 1002 aa19.85■□□□□ 0.77
COMMD6-208ENST00000471682 MYH16Q9H6N6 1097 aa19.85■□□□□ 0.77
COMMD6-208ENST00000471682 SOS1Q07889 1333 aaPredicted RBP19.84■□□□□ 0.77
COMMD6-208ENST00000471682 GIGYF1O75420 1035 aaPredicted RBP19.84■□□□□ 0.77
COMMD6-208ENST00000471682 HOXB7P09629 217 aa19.84■□□□□ 0.77
COMMD6-208ENST00000471682 HNRNPUQ00839 825 aaKnown RBP eCLIP19.84■□□□□ 0.77
COMMD6-208ENST00000471682 LINC00116Q8NCU8 138 aa19.84■□□□□ 0.77
COMMD6-208ENST00000471682 AKT1S1Q96B36 256 aa19.84■□□□□ 0.77
COMMD6-208ENST00000471682 TJP1Q07157 1748 aa19.84■□□□□ 0.77
COMMD6-208ENST00000471682 COL5A3P25940 1745 aaPredicted RBP19.83■□□□□ 0.77
COMMD6-208ENST00000471682 E9PSI1 815 aa19.83■□□□□ 0.77
COMMD6-208ENST00000471682 KCNQ4P56696 695 aa19.83■□□□□ 0.77
COMMD6-208ENST00000471682 SLC15A2Q16348 729 aa19.83■□□□□ 0.77
COMMD6-208ENST00000471682 DNAJC10Q8IXB1 793 aa19.83■□□□□ 0.77
COMMD6-208ENST00000471682 STK32BQ9NY57 414 aa19.83■□□□□ 0.77
COMMD6-208ENST00000471682 C4BP0C0L5 1744 aa19.82■□□□□ 0.76
COMMD6-208ENST00000471682 CYP19A1P11511 503 aaPredicted RBP19.82■□□□□ 0.76
COMMD6-208ENST00000471682 ZBED9Q6R2W3 1325 aa19.81■□□□□ 0.76
COMMD6-208ENST00000471682 CHMP4AQ9BY43 222 aa19.81■□□□□ 0.76
COMMD6-208ENST00000471682 FANCIQ9NVI1 1328 aa19.79■□□□□ 0.76
COMMD6-208ENST00000471682 CRKLP46109 303 aaKnown RBP19.79■□□□□ 0.76
COMMD6-208ENST00000471682 SLFN5Q08AF3 891 aa19.79■□□□□ 0.76
COMMD6-208ENST00000471682 FLAD1Q8NFF5 587 aa19.79■□□□□ 0.76
COMMD6-208ENST00000471682 AK7Q96M32 723 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms