RNA–Protein interactions for RNA: ENST00000471039.1

SCNM1-205, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-205ENST00000471039 LAMB4A4D0S4 1761 aa16.48■□□□□ 0.23
SCNM1-205ENST00000471039 LRP5O75197 1615 aa16.48■□□□□ 0.23
SCNM1-205ENST00000471039 MAPK8IP3Q9UPT6 1336 aa16.47■□□□□ 0.23
SCNM1-205ENST00000471039 GNAT3A8MTJ3 354 aa16.47■□□□□ 0.23
SCNM1-205ENST00000471039 LGR6Q9HBX8 967 aa16.47■□□□□ 0.23
SCNM1-205ENST00000471039 ANO8Q9HCE9 1232 aaPredicted RBP16.47■□□□□ 0.23
SCNM1-205ENST00000471039 NEFMP07197 916 aa16.46■□□□□ 0.23
SCNM1-205ENST00000471039 CABP4P57796 275 aa16.46■□□□□ 0.23
SCNM1-205ENST00000471039 SLC52A2Q9HAB3 445 aa16.46■□□□□ 0.23
SCNM1-205ENST00000471039 LRRC4BQ9NT99 713 aa16.46■□□□□ 0.23
SCNM1-205ENST00000471039 C4AP0C0L4 1744 aa16.45■□□□□ 0.22
SCNM1-205ENST00000471039 SLC27A3Q5K4L6 730 aa16.45■□□□□ 0.22
SCNM1-205ENST00000471039 SMARCC1Q92922 1105 aaPredicted RBP16.45■□□□□ 0.22
SCNM1-205ENST00000471039 PNNQ9H307 717 aaKnown RBP16.45■□□□□ 0.22
SCNM1-205ENST00000471039 ASAP1Q9ULH1 1129 aa16.45■□□□□ 0.22
SCNM1-205ENST00000471039 NFE2L2Q16236 605 aa16.44■□□□□ 0.22
SCNM1-205ENST00000471039 ATG3Q9NT62 314 aa16.44■□□□□ 0.22
SCNM1-205ENST00000471039 CCNL1Q9UK58 526 aaPredicted RBP16.44■□□□□ 0.22
SCNM1-205ENST00000471039 COL24A1Q17RW2 1714 aa16.44■□□□□ 0.22
SCNM1-205ENST00000471039 MYH14Q7Z406 1995 aaKnown RBP16.44■□□□□ 0.22
SCNM1-205ENST00000471039 KCNQ4P56696 695 aa16.43■□□□□ 0.22
SCNM1-205ENST00000471039 CCDC146Q8IYE0 955 aa16.43■□□□□ 0.22
SCNM1-205ENST00000471039 NFATC2IPQ8NCF5 419 aa16.43■□□□□ 0.22
SCNM1-205ENST00000471039 IL17REQ8NFR9 667 aa16.43■□□□□ 0.22
SCNM1-205ENST00000471039 MRS2Q9HD23 443 aa16.43■□□□□ 0.22
SCNM1-205ENST00000471039 ADAMTS8Q9UP79 889 aa16.43■□□□□ 0.22
SCNM1-205ENST00000471039 PSDA5PKW4 1024 aaPredicted RBP16.42■□□□□ 0.22
SCNM1-205ENST00000471039 R3HDM1Q15032 1099 aaKnown RBP16.42■□□□□ 0.22
SCNM1-205ENST00000471039 LOC102724428A0A0B4J2F2 783 aa16.41■□□□□ 0.22
SCNM1-205ENST00000471039 SIK1P57059 783 aa16.41■□□□□ 0.22
SCNM1-205ENST00000471039 ZNF827Q17R98 1081 aa16.41■□□□□ 0.22
SCNM1-205ENST00000471039 NBPF14Q5TI25 921 aa16.41■□□□□ 0.22
SCNM1-205ENST00000471039 TEFQ10587 303 aa16.4■□□□□ 0.22
SCNM1-205ENST00000471039 MCM10Q7L590 875 aa16.4■□□□□ 0.22
SCNM1-205ENST00000471039 RTF1Q92541 710 aaKnown RBP16.4■□□□□ 0.22
SCNM1-205ENST00000471039 RUNDC1Q96C34 613 aa16.4■□□□□ 0.22
SCNM1-205ENST00000471039 HTATSF1O43719 755 aaKnown RBP16.39■□□□□ 0.21
SCNM1-205ENST00000471039 DCTN1Q14203 1278 aa16.39■□□□□ 0.21
SCNM1-205ENST00000471039 STK32BQ9NY57 414 aa16.39■□□□□ 0.21
SCNM1-205ENST00000471039 TMPOP42166 694 aaKnown RBP16.38■□□□□ 0.21
SCNM1-205ENST00000471039 SLC15A2Q16348 729 aa16.38■□□□□ 0.21
SCNM1-205ENST00000471039 AKT1S1Q96B36 256 aa16.38■□□□□ 0.21
SCNM1-205ENST00000471039 SLC4A9Q96Q91 983 aa16.38■□□□□ 0.21
SCNM1-205ENST00000471039 SLC39A6Q13433 755 aa16.37■□□□□ 0.21
SCNM1-205ENST00000471039 ITPK1Q13572 414 aa16.37■□□□□ 0.21
SCNM1-205ENST00000471039 PNISRQ8TF01 805 aaKnown RBP16.37■□□□□ 0.21
SCNM1-205ENST00000471039 RBM42Q9BTD8 480 aaKnown RBP16.37■□□□□ 0.21
SCNM1-205ENST00000471039 ATP6V1AP38606 617 aa16.36■□□□□ 0.21
SCNM1-205ENST00000471039 LINC00116Q8NCU8 138 aa16.36■□□□□ 0.21
SCNM1-205ENST00000471039 RRP7AQ9Y3A4 280 aaKnown RBP16.36■□□□□ 0.21
SCNM1-205ENST00000471039 SCN7AQ01118 1682 aa16.35■□□□□ 0.21
SCNM1-205ENST00000471039 PTCD1O75127 700 aaKnown RBP16.35■□□□□ 0.21
SCNM1-205ENST00000471039 RIPK4P57078 832 aa16.35■□□□□ 0.21
SCNM1-205ENST00000471039 LMOD3Q0VAK6 560 aa16.35■□□□□ 0.21
SCNM1-205ENST00000471039 THUMPD2Q9BTF0 503 aaKnown RBP16.35■□□□□ 0.21
SCNM1-205ENST00000471039 BCORQ6W2J9 1755 aa16.34■□□□□ 0.21
SCNM1-205ENST00000471039 PNPLA7Q6ZV29 1317 aa16.34■□□□□ 0.21
SCNM1-205ENST00000471039 BTBD11A6QL63 1104 aa16.33■□□□□ 0.2
SCNM1-205ENST00000471039 DIEXFQ68CQ4 756 aaKnown RBP16.33■□□□□ 0.2
SCNM1-205ENST00000471039 ZNF790Q6PG37 636 aa16.33■□□□□ 0.2
SCNM1-205ENST00000471039 TTC5Q8N0Z6 440 aa16.33■□□□□ 0.2
SCNM1-205ENST00000471039 CNTNAP4Q9C0A0 1308 aa16.33■□□□□ 0.2
SCNM1-205ENST00000471039 HEG1Q9ULI3 1381 aa16.33■□□□□ 0.2
SCNM1-205ENST00000471039 HMGB2P26583 209 aaKnown RBP16.32■□□□□ 0.2
SCNM1-205ENST00000471039 NEUROD2Q15784 382 aa16.32■□□□□ 0.2
SCNM1-205ENST00000471039 AK7Q96M32 723 aa16.32■□□□□ 0.2
SCNM1-205ENST00000471039 PDGFDQ9GZP0 370 aaPredicted RBP16.32■□□□□ 0.2
SCNM1-205ENST00000471039 APAF1O14727 1248 aa16.31■□□□□ 0.2
SCNM1-205ENST00000471039 ZNF496Q96IT1 587 aaPredicted RBP16.31■□□□□ 0.2
SCNM1-205ENST00000471039 TFCP2L1Q9NZI6 479 aa16.31■□□□□ 0.2
SCNM1-205ENST00000471039 TRIM35Q9UPQ4 493 aa16.31■□□□□ 0.2
SCNM1-205ENST00000471039 KCNQ3O43525 872 aa16.3■□□□□ 0.2
SCNM1-205ENST00000471039 AMIGO3Q86WK7 504 aa16.3■□□□□ 0.2
SCNM1-205ENST00000471039 VSIG10Q8N0Z9 540 aa16.3■□□□□ 0.2
SCNM1-205ENST00000471039 CCER2I3L3R5 266 aa16.29■□□□□ 0.2
SCNM1-205ENST00000471039 TAF7Q15545 349 aaPredicted RBP16.29■□□□□ 0.2
SCNM1-205ENST00000471039 DNAJC10Q8IXB1 793 aa16.29■□□□□ 0.2
SCNM1-205ENST00000471039 FMNL2Q96PY5 1086 aa16.29■□□□□ 0.2
SCNM1-205ENST00000471039 GNPATO15228 680 aa16.28■□□□□ 0.2
SCNM1-205ENST00000471039 FAM9BQ8IZU0 186 aa16.28■□□□□ 0.2
SCNM1-205ENST00000471039 SSFA2P28290 1259 aa16.27■□□□□ 0.2
SCNM1-205ENST00000471039 CRKLP46109 303 aaKnown RBP16.27■□□□□ 0.2
SCNM1-205ENST00000471039 SRCAPQ6ZRS2 3230 aa16.27■□□□□ 0.19
SCNM1-205ENST00000471039 PHF14O94880 888 aa16.26■□□□□ 0.19
SCNM1-205ENST00000471039 RC3H1Q5TC82 1133 aaKnown RBP16.26■□□□□ 0.19
SCNM1-205ENST00000471039 MIS18AQ9NYP9 233 aa16.26■□□□□ 0.19
SCNM1-205ENST00000471039 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.25■□□□□ 0.19
SCNM1-205ENST00000471039 ZBTB7AO95365 584 aa16.25■□□□□ 0.19
SCNM1-205ENST00000471039 CYP19A1P11511 503 aaPredicted RBP16.25■□□□□ 0.19
SCNM1-205ENST00000471039 SMIM5Q71RC9 77 aa16.25■□□□□ 0.19
SCNM1-205ENST00000471039 COL23A1Q86Y22 540 aaPredicted RBP16.25■□□□□ 0.19
SCNM1-205ENST00000471039 CCDC87Q9NVE4 849 aa16.25■□□□□ 0.19
SCNM1-205ENST00000471039 TSPYL4Q9UJ04 414 aa16.25■□□□□ 0.19
SCNM1-205ENST00000471039 SENP3-EIF4A1A0A087X0R7 540 aa16.24■□□□□ 0.19
SCNM1-205ENST00000471039 FLAD1Q8NFF5 587 aa16.24■□□□□ 0.19
SCNM1-205ENST00000471039 MTFR1LQ9H019 292 aa16.24■□□□□ 0.19
SCNM1-205ENST00000471039 ZBTB1Q9Y2K1 713 aa16.24■□□□□ 0.19
SCNM1-205ENST00000471039 RTCBQ9Y3I0 505 aaKnown RBP16.24■□□□□ 0.19
SCNM1-205ENST00000471039 COL15A1P39059 1388 aa16.24■□□□□ 0.19
SCNM1-205ENST00000471039 SOS1Q07889 1333 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms