RNA–Protein interactions for RNA: ENST00000471030.1

LSMEM1-204, Transcript of leucine rich single-pass membrane protein 1, humanhuman

TSL 3

Gene LSMEM1, Length 483 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-204ENST00000471030 RBM46Q8TBY0 533 aaKnown RBP8.05□□□□□ -1.12
LSMEM1-204ENST00000471030 NPDC1Q9NQX5 325 aaPredicted RBP8.05□□□□□ -1.12
LSMEM1-204ENST00000471030 TSKSQ9UJT2 592 aa8.05□□□□□ -1.12
LSMEM1-204ENST00000471030 PNMA3Q9UL41 463 aa8.05□□□□□ -1.12
LSMEM1-204ENST00000471030 AATKQ6ZMQ8 1374 aa8.05□□□□□ -1.12
LSMEM1-204ENST00000471030 MINK1Q8N4C8 1332 aaPredicted RBP8.04□□□□□ -1.12
LSMEM1-204ENST00000471030 KIF16BQ96L93 1317 aa8.04□□□□□ -1.12
LSMEM1-204ENST00000471030 EDC4Q6P2E9 1401 aaKnown RBP8.04□□□□□ -1.12
LSMEM1-204ENST00000471030 SENP3-EIF4A1A0A087X0R7 540 aa8.04□□□□□ -1.12
LSMEM1-204ENST00000471030 GNPATO15228 680 aa8.04□□□□□ -1.12
LSMEM1-204ENST00000471030 FBXO31Q5XUX0 539 aaPredicted RBP8.04□□□□□ -1.12
LSMEM1-204ENST00000471030 ZKSCAN2Q63HK3 967 aa8.04□□□□□ -1.12
LSMEM1-204ENST00000471030 PADI6Q6TGC4 694 aa8.04□□□□□ -1.12
LSMEM1-204ENST00000471030 TATDN2Q93075 761 aa8.04□□□□□ -1.12
LSMEM1-204ENST00000471030 KCTD12Q96CX2 325 aaKnown RBP8.04□□□□□ -1.12
LSMEM1-204ENST00000471030 RIMBP3CA6NJZ7 1639 aa8.03□□□□□ -1.12
LSMEM1-204ENST00000471030 RIMBP3BA6NNM3 1639 aa8.03□□□□□ -1.12
LSMEM1-204ENST00000471030 RIMBP3Q9UFD9 1639 aa8.03□□□□□ -1.12
LSMEM1-204ENST00000471030 TNRQ92752 1358 aa8.03□□□□□ -1.12
LSMEM1-204ENST00000471030 WASLO00401 505 aaPredicted RBP8.03□□□□□ -1.12
LSMEM1-204ENST00000471030 OATP04181 439 aa8.03□□□□□ -1.12
LSMEM1-204ENST00000471030 TMPOP42166 694 aaKnown RBP8.03□□□□□ -1.12
LSMEM1-204ENST00000471030 ALDH1L2Q3SY69 923 aa8.03□□□□□ -1.12
LSMEM1-204ENST00000471030 C20orf194Q5TEA3 1177 aa8.03□□□□□ -1.12
LSMEM1-204ENST00000471030 NUTM2DQ5VT03 806 aaPredicted RBP8.03□□□□□ -1.12
LSMEM1-204ENST00000471030 FTSJ3Q8IY81 847 aaKnown RBP8.03□□□□□ -1.12
LSMEM1-204ENST00000471030 TTC13Q8NBP0 860 aa8.03□□□□□ -1.12
LSMEM1-204ENST00000471030 LRCH3Q96II8 777 aa8.03□□□□□ -1.12
LSMEM1-204ENST00000471030 UPF2Q9HAU5 1272 aaKnown RBP8.03□□□□□ -1.12
LSMEM1-204ENST00000471030 CABP1Q9NZU7 370 aa8.03□□□□□ -1.12
LSMEM1-204ENST00000471030 SEPT9Q9UHD8 586 aaPredicted RBP8.03□□□□□ -1.12
LSMEM1-204ENST00000471030 ADGRB2O60241 1585 aa8.02□□□□□ -1.13
LSMEM1-204ENST00000471030 NLRP1Q9C000 1473 aa8.02□□□□□ -1.13
LSMEM1-204ENST00000471030 U2SURPO15042 1029 aaKnown RBP8.02□□□□□ -1.13
LSMEM1-204ENST00000471030 BCAR3O75815 825 aa8.02□□□□□ -1.13
LSMEM1-204ENST00000471030 BRPF1P55201 1214 aaPredicted RBP8.02□□□□□ -1.13
LSMEM1-204ENST00000471030 SAFB2Q14151 953 aaKnown RBP eCLIP8.02□□□□□ -1.13
LSMEM1-204ENST00000471030 NYAP1Q6ZVC0 841 aa8.02□□□□□ -1.13
LSMEM1-204ENST00000471030 NUDT18Q6ZVK8 323 aa8.02□□□□□ -1.13
LSMEM1-204ENST00000471030 ZFRQ96KR1 1074 aaKnown RBP8.02□□□□□ -1.13
LSMEM1-204ENST00000471030 PLEKHF1Q96S99 279 aa8.02□□□□□ -1.13
LSMEM1-204ENST00000471030 GGNBP2Q9H3C7 697 aa8.02□□□□□ -1.13
LSMEM1-204ENST00000471030 DDX19BQ9UMR2 479 aa8.02□□□□□ -1.13
LSMEM1-204ENST00000471030 MVPQ14764 893 aaKnown RBP8.01□□□□□ -1.13
LSMEM1-204ENST00000471030 NEUROD2Q15784 382 aa8.01□□□□□ -1.13
LSMEM1-204ENST00000471030 DZIP1LQ8IYY4 767 aaKnown RBP8.01□□□□□ -1.13
LSMEM1-204ENST00000471030 COG3Q96JB2 828 aa8.01□□□□□ -1.13
LSMEM1-204ENST00000471030 EID1Q9Y6B2 187 aa8.01□□□□□ -1.13
LSMEM1-204ENST00000471030 CPSF1Q10570 1443 aaKnown RBP8.01□□□□□ -1.13
LSMEM1-204ENST00000471030 SHPRHQ149N8 1683 aa8.01□□□□□ -1.13
LSMEM1-204ENST00000471030 CDC42BPGQ6DT37 1551 aa8.01□□□□□ -1.13
LSMEM1-204ENST00000471030 COL3A1P02461 1466 aaPredicted RBP8□□□□□ -1.13
LSMEM1-204ENST00000471030 CD163L1Q9NR16 1453 aa8□□□□□ -1.13
LSMEM1-204ENST00000471030 TMEM2Q9UHN6 1383 aa8□□□□□ -1.13
LSMEM1-204ENST00000471030 RIPK4P57078 832 aa8□□□□□ -1.13
LSMEM1-204ENST00000471030 GNAI1P63096 354 aa8□□□□□ -1.13
LSMEM1-204ENST00000471030 LMOD2Q6P5Q4 547 aa8□□□□□ -1.13
LSMEM1-204ENST00000471030 THSD4Q6ZMP0 1018 aa8□□□□□ -1.13
LSMEM1-204ENST00000471030 ARHGAP45Q92619 1136 aa8□□□□□ -1.13
LSMEM1-204ENST00000471030 FRAT1Q92837 279 aaPredicted RBP8□□□□□ -1.13
LSMEM1-204ENST00000471030 CDKN2AIPQ9NXV6 580 aaPredicted RBP8□□□□□ -1.13
LSMEM1-204ENST00000471030 PPIP5K1Q6PFW1 1433 aa8□□□□□ -1.13
LSMEM1-204ENST00000471030 PLEKHG1Q9ULL1 1385 aa7.99□□□□□ -1.13
LSMEM1-204ENST00000471030 SOWAHBA6NEL2 793 aa7.99□□□□□ -1.13
LSMEM1-204ENST00000471030 HDAC1Q13547 482 aaPredicted RBP7.99□□□□□ -1.13
LSMEM1-204ENST00000471030 BECN1Q14457 450 aa7.99□□□□□ -1.13
LSMEM1-204ENST00000471030 NFE2L2Q16236 605 aa7.99□□□□□ -1.13
LSMEM1-204ENST00000471030 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.99□□□□□ -1.13
LSMEM1-204ENST00000471030 SMC4Q9NTJ3 1288 aa7.99□□□□□ -1.13
LSMEM1-204ENST00000471030 CDK12Q9NYV4 1490 aaPredicted RBP7.99□□□□□ -1.13
LSMEM1-204ENST00000471030 ANKRD26Q9UPS8 1709 aa7.98□□□□□ -1.13
LSMEM1-204ENST00000471030 CFAP65Q6ZU64 1925 aaKnown RBP7.98□□□□□ -1.13
LSMEM1-204ENST00000471030 PLEKHG3A1L390 1219 aa7.98□□□□□ -1.13
LSMEM1-204ENST00000471030 DNAJB2P25686 324 aa7.98□□□□□ -1.13
LSMEM1-204ENST00000471030 ATF7IPQ6VMQ6 1270 aa7.98□□□□□ -1.13
LSMEM1-204ENST00000471030 SLF2Q8IX21 1173 aa7.98□□□□□ -1.13
LSMEM1-204ENST00000471030 NUDT16Q96DE0 195 aaKnown RBP7.98□□□□□ -1.13
LSMEM1-204ENST00000471030 IFT57Q9NWB7 429 aa7.98□□□□□ -1.13
LSMEM1-204ENST00000471030 POLKQ9UBT6 870 aa7.98□□□□□ -1.13
LSMEM1-204ENST00000471030 COG6Q9Y2V7 657 aa7.98□□□□□ -1.13
LSMEM1-204ENST00000471030 RRP7AQ9Y3A4 280 aaKnown RBP7.98□□□□□ -1.13
LSMEM1-204ENST00000471030 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.97□□□□□ -1.13
LSMEM1-204ENST00000471030 NPM2Q86SE8 214 aaKnown RBP7.97□□□□□ -1.13
LSMEM1-204ENST00000471030 RSPH6AQ9H0K4 717 aa7.97□□□□□ -1.13
LSMEM1-204ENST00000471030 ADGRG1Q9Y653 693 aa7.97□□□□□ -1.13
LSMEM1-204ENST00000471030 CPS1P31327 1500 aa7.97□□□□□ -1.13
LSMEM1-204ENST00000471030 TTC21AQ8NDW8 1320 aa7.97□□□□□ -1.13
LSMEM1-204ENST00000471030 KIF24Q5T7B8 1368 aa7.97□□□□□ -1.13
LSMEM1-204ENST00000471030 KNDC1Q76NI1 1749 aa7.96□□□□□ -1.14
LSMEM1-204ENST00000471030 PTPN5P54829 565 aa7.96□□□□□ -1.14
LSMEM1-204ENST00000471030 MLECQ14165 292 aa7.96□□□□□ -1.14
LSMEM1-204ENST00000471030 C8orf34Q49A92 452 aa7.96□□□□□ -1.14
LSMEM1-204ENST00000471030 THEMISQ8N1K5 641 aaPredicted RBP7.96□□□□□ -1.14
LSMEM1-204ENST00000471030 PANK1Q8TE04 598 aa7.96□□□□□ -1.14
LSMEM1-204ENST00000471030 CHMP4AQ9BY43 222 aa7.96□□□□□ -1.14
LSMEM1-204ENST00000471030 FAM198AQ9UFP1 575 aa7.96□□□□□ -1.14
LSMEM1-204ENST00000471030 TSR3Q9UJK0 312 aaKnown RBP7.96□□□□□ -1.14
LSMEM1-204ENST00000471030 TBX22Q9Y458 520 aa7.96□□□□□ -1.14
LSMEM1-204ENST00000471030 TTC21BQ7Z4L5 1316 aa7.96□□□□□ -1.14
LSMEM1-204ENST00000471030 METP08581 1390 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms