RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 CARMIL2Q6F5E8 1435 aa9.84□□□□□ -0.83
GPNMB-208ENST00000470994 ESPNB1AK53 854 aa9.84□□□□□ -0.83
GPNMB-208ENST00000470994 H7C1W4 665 aa9.84□□□□□ -0.83
GPNMB-208ENST00000470994 ADD1P35611 737 aaKnown RBP9.84□□□□□ -0.83
GPNMB-208ENST00000470994 TRERF1Q96PN7 1200 aa9.84□□□□□ -0.83
GPNMB-208ENST00000470994 CUEDC1Q9NWM3 386 aaPredicted RBP9.84□□□□□ -0.83
GPNMB-208ENST00000470994 TNIKQ9UKE5 1360 aa9.84□□□□□ -0.83
GPNMB-208ENST00000470994 GPC1P35052 558 aa9.83□□□□□ -0.84
GPNMB-208ENST00000470994 RIPOR1Q6ZS17 1223 aa9.83□□□□□ -0.84
GPNMB-208ENST00000470994 CCDC125Q86Z20 511 aa9.83□□□□□ -0.84
GPNMB-208ENST00000470994 NEDD1Q8NHV4 660 aa9.83□□□□□ -0.84
GPNMB-208ENST00000470994 DDRGK1Q96HY6 314 aa9.83□□□□□ -0.84
GPNMB-208ENST00000470994 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.83□□□□□ -0.84
GPNMB-208ENST00000470994 CYLDQ9NQC7 956 aa9.83□□□□□ -0.84
GPNMB-208ENST00000470994 NSFL1CQ9UNZ2 370 aaKnown RBP9.83□□□□□ -0.84
GPNMB-208ENST00000470994 ATP5J2-PTCD1G3V325 749 aa9.82□□□□□ -0.84
GPNMB-208ENST00000470994 BCRP11274 1271 aa9.82□□□□□ -0.84
GPNMB-208ENST00000470994 RHOQP17081 205 aa9.82□□□□□ -0.84
GPNMB-208ENST00000470994 KDF1Q8NAX2 398 aaPredicted RBP9.82□□□□□ -0.84
GPNMB-208ENST00000470994 RUSC2Q8N2Y8 1516 aa9.82□□□□□ -0.84
GPNMB-208ENST00000470994 USP17L8P0C7I0 530 aa9.8□□□□□ -0.84
GPNMB-208ENST00000470994 PLA2G4EQ3MJ16 856 aa9.8□□□□□ -0.84
GPNMB-208ENST00000470994 PROCA1Q8NCQ7 364 aaPredicted RBP9.8□□□□□ -0.84
GPNMB-208ENST00000470994 DCAF5Q96JK2 942 aa9.8□□□□□ -0.84
GPNMB-208ENST00000470994 LRRC4BQ9NT99 713 aa9.8□□□□□ -0.84
GPNMB-208ENST00000470994 DYRK1BQ9Y463 629 aa9.8□□□□□ -0.84
GPNMB-208ENST00000470994 MEN1O00255 615 aa9.79□□□□□ -0.84
GPNMB-208ENST00000470994 GALNT6Q8NCL4 622 aa9.79□□□□□ -0.84
GPNMB-208ENST00000470994 EPS8L1Q8TE68 723 aa9.79□□□□□ -0.84
GPNMB-208ENST00000470994 GPR25O00155 361 aa9.78□□□□□ -0.84
GPNMB-208ENST00000470994 SLC27A3Q5K4L6 730 aa9.78□□□□□ -0.84
GPNMB-208ENST00000470994 NLRP3Q96P20 1036 aa9.78□□□□□ -0.84
GPNMB-208ENST00000470994 MAPKBP1O60336 1514 aa9.77□□□□□ -0.84
GPNMB-208ENST00000470994 FAM9AQ8IZU1 332 aaPredicted RBP9.77□□□□□ -0.85
GPNMB-208ENST00000470994 SPOCK3Q9BQ16 436 aa9.77□□□□□ -0.85
GPNMB-208ENST00000470994 CNTNAP5Q8WYK1 1306 aa9.77□□□□□ -0.85
GPNMB-208ENST00000470994 ASXL2Q76L83 1435 aa9.76□□□□□ -0.85
GPNMB-208ENST00000470994 UACAQ9BZF9 1416 aa9.76□□□□□ -0.85
GPNMB-208ENST00000470994 ADCY10Q96PN6 1610 aa9.76□□□□□ -0.85
GPNMB-208ENST00000470994 MX2P20592 715 aa9.76□□□□□ -0.85
GPNMB-208ENST00000470994 DBN1Q16643 649 aa9.76□□□□□ -0.85
GPNMB-208ENST00000470994 GTPBP3Q969Y2 492 aaKnown RBP9.76□□□□□ -0.85
GPNMB-208ENST00000470994 GAS2L1Q99501 681 aaPredicted RBP9.76□□□□□ -0.85
GPNMB-208ENST00000470994 HMX1Q9NP08 348 aaPredicted RBP9.76□□□□□ -0.85
GPNMB-208ENST00000470994 RAPGEF2Q9Y4G8 1499 aa9.76□□□□□ -0.85
GPNMB-208ENST00000470994 CUL7Q14999 1698 aa9.75□□□□□ -0.85
GPNMB-208ENST00000470994 ARID3CA6NKF2 412 aa9.75□□□□□ -0.85
GPNMB-208ENST00000470994 ADAM23O75077 832 aa9.75□□□□□ -0.85
GPNMB-208ENST00000470994 RNF20Q5VTR2 975 aa9.75□□□□□ -0.85
GPNMB-208ENST00000470994 FBXO31Q5XUX0 539 aaPredicted RBP9.75□□□□□ -0.85
GPNMB-208ENST00000470994 ZNF592Q92610 1267 aa9.75□□□□□ -0.85
GPNMB-208ENST00000470994 PCDHB9Q9Y5E1 797 aa9.75□□□□□ -0.85
GPNMB-208ENST00000470994 ABCC2Q92887 1545 aa9.75□□□□□ -0.85
GPNMB-208ENST00000470994 PLB1Q6P1J6 1458 aa9.74□□□□□ -0.85
GPNMB-208ENST00000470994 A0A1W2PRU2 124 aa9.74□□□□□ -0.85
GPNMB-208ENST00000470994 CYP2U1Q7Z449 544 aa9.74□□□□□ -0.85
GPNMB-208ENST00000470994 ACDQ96AP0 544 aa9.74□□□□□ -0.85
GPNMB-208ENST00000470994 KDM4CQ9H3R0 1056 aa9.74□□□□□ -0.85
GPNMB-208ENST00000470994 ESF1Q9H501 851 aaKnown RBP9.74□□□□□ -0.85
GPNMB-208ENST00000470994 ZBBXA8MT70 800 aa9.73□□□□□ -0.85
GPNMB-208ENST00000470994 RANGAP1P46060 587 aaPredicted RBP9.73□□□□□ -0.85
GPNMB-208ENST00000470994 WDR44Q5JSH3 913 aa9.73□□□□□ -0.85
GPNMB-208ENST00000470994 CC2D2BQ6DHV5 1058 aa9.73□□□□□ -0.85
GPNMB-208ENST00000470994 DIP2BQ9P265 1576 aa9.72□□□□□ -0.85
GPNMB-208ENST00000470994 MAP2K3P46734 347 aa9.72□□□□□ -0.85
GPNMB-208ENST00000470994 POU4F2Q12837 409 aa9.72□□□□□ -0.85
GPNMB-208ENST00000470994 IQGAP2Q13576 1575 aa9.71□□□□□ -0.85
GPNMB-208ENST00000470994 ERVK-9P63128 1117 aa9.71□□□□□ -0.86
GPNMB-208ENST00000470994 CLN3Q13286 438 aa9.71□□□□□ -0.86
GPNMB-208ENST00000470994 NBPF10Q6P3W6 841 aaKnown RBP9.71□□□□□ -0.86
GPNMB-208ENST00000470994 ALYREFQ86V81 257 aaKnown RBP9.71□□□□□ -0.86
GPNMB-208ENST00000470994 NBPF15Q8N660 670 aa9.71□□□□□ -0.86
GPNMB-208ENST00000470994 NUCKS1Q9H1E3 243 aaKnown RBP9.71□□□□□ -0.86
GPNMB-208ENST00000470994 DISP1Q96F81 1524 aa9.71□□□□□ -0.86
GPNMB-208ENST00000470994 KIF13AQ9H1H9 1805 aa9.7□□□□□ -0.86
GPNMB-208ENST00000470994 OIP5O43482 229 aa9.7□□□□□ -0.86
GPNMB-208ENST00000470994 GIGYF1O75420 1035 aaPredicted RBP9.7□□□□□ -0.86
GPNMB-208ENST00000470994 RFC5P40937 340 aa9.7□□□□□ -0.86
GPNMB-208ENST00000470994 MCCD1P59942 119 aaPredicted RBP9.7□□□□□ -0.86
GPNMB-208ENST00000470994 TAS1R3Q7RTX0 852 aa9.7□□□□□ -0.86
GPNMB-208ENST00000470994 OXCT2Q9BYC2 517 aaPredicted RBP9.7□□□□□ -0.86
GPNMB-208ENST00000470994 FAM117AQ9C073 453 aa9.7□□□□□ -0.86
GPNMB-208ENST00000470994 TIMMDC1Q9NPL8 285 aa9.7□□□□□ -0.86
GPNMB-208ENST00000470994 UHRF1BP1LA0JNW5 1464 aa9.7□□□□□ -0.86
GPNMB-208ENST00000470994 KDM6BO15054 1643 aa9.7□□□□□ -0.86
GPNMB-208ENST00000470994 SPATA31C2B4DYI2 1134 aa9.69□□□□□ -0.86
GPNMB-208ENST00000470994 F11P03951 625 aa9.69□□□□□ -0.86
GPNMB-208ENST00000470994 GRIP2Q9C0E4 1043 aa9.69□□□□□ -0.86
GPNMB-208ENST00000470994 PHF24Q9UPV7 400 aa9.69□□□□□ -0.86
GPNMB-208ENST00000470994 WASLO00401 505 aaPredicted RBP9.68□□□□□ -0.86
GPNMB-208ENST00000470994 PROCP04070 461 aa9.68□□□□□ -0.86
GPNMB-208ENST00000470994 TMEM259Q4ZIN3 620 aa9.68□□□□□ -0.86
GPNMB-208ENST00000470994 XP32Q5T750 250 aa9.68□□□□□ -0.86
GPNMB-208ENST00000470994 GPBP1L1Q9HC44 474 aaPredicted RBP9.68□□□□□ -0.86
GPNMB-208ENST00000470994 MKL2Q9ULH7 1088 aa9.68□□□□□ -0.86
GPNMB-208ENST00000470994 ZNF330Q9Y3S2 320 aaPredicted RBP9.68□□□□□ -0.86
GPNMB-208ENST00000470994 K7ELQ4 463 aaPredicted RBP9.67□□□□□ -0.86
GPNMB-208ENST00000470994 CFHR5Q9BXR6 569 aa9.67□□□□□ -0.86
GPNMB-208ENST00000470994 EPRSP07814 1512 aaKnown RBP9.66□□□□□ -0.86
GPNMB-208ENST00000470994 TSPOAP1O95153 1857 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms